RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 ZNF414Q96IQ9 312 aa5.26□□□□□ -1.57
MSH2-204ENST00000461394 BTF3L4Q96K17 158 aa5.26□□□□□ -1.57
MSH2-204ENST00000461394 IGF2BP2-AS1Q96M15 143 aa5.26□□□□□ -1.57
MSH2-204ENST00000461394 GPR82Q96P67 336 aa5.26□□□□□ -1.57
MSH2-204ENST00000461394 ATP6V0BQ99437 205 aa5.26□□□□□ -1.57
MSH2-204ENST00000461394 RNASE7Q9H1E1 156 aaKnown RBP5.26□□□□□ -1.57
MSH2-204ENST00000461394 KLK15Q9H2R5 256 aa5.26□□□□□ -1.57
MSH2-204ENST00000461394 BIN3Q9NQY0 253 aa5.26□□□□□ -1.57
MSH2-204ENST00000461394 KLK9Q9UKQ9 250 aa5.26□□□□□ -1.57
MSH2-204ENST00000461394 USP9XQ93008 2570 aaPredicted RBP5.26□□□□□ -1.57
MSH2-204ENST00000461394 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.25□□□□□ -1.57
MSH2-204ENST00000461394 LOC105371267A0A1B0GV96 52 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 NDUFA4O00483 81 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 CD5LO43866 347 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 GGCTO75223 188 aaKnown RBP5.25□□□□□ -1.57
MSH2-204ENST00000461394 GCGP01275 180 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 TRBV12-3P01733 135 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 PRB4P10163 310 aaPredicted RBP5.25□□□□□ -1.57
MSH2-204ENST00000461394 MYCNOSP40205 109 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 SCGB2A2Q13296 93 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 PDE6HQ13956 83 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 KHDC1LQ5JSQ8 128 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 Q86TA4 180 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 C1QL4Q86Z23 238 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 TMEM190Q8WZ59 177 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 YPEL4Q96NS1 127 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 OSTCQ9NRP0 149 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 IL36BQ9NZH7 164 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.25□□□□□ -1.57
MSH2-204ENST00000461394 FAM208BQ5VWN6 2430 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 PRRC2AP48634 2157 aaKnown RBP5.25□□□□□ -1.57
MSH2-204ENST00000461394 DOPEY2Q9Y3R5 2298 aa5.25□□□□□ -1.57
MSH2-204ENST00000461394 ZFYVE26Q68DK2 2539 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 TRBV24-1A0A075B6N3 115 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 TRAV8-1A0A0A6YYK1 113 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 A0A1W2PS18 150 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 MRPS12O15235 138 aaKnown RBP5.24□□□□□ -1.57
MSH2-204ENST00000461394 BRI3O95415 125 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 IGLV1-40P01703 118 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 TRGC2P03986 189 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 PFN1P07737 140 aaKnown RBP5.24□□□□□ -1.57
MSH2-204ENST00000461394 TCL1AP56279 114 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 FAM106AQ4KMX7 169 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 SIGLEC15Q6ZMC9 328 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 GBGT1Q8N5D6 347 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 TMEM75Q8N9X5 138 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 FRZBQ92765 325 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 IMMP2LQ96T52 175 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 ZNF702PQ9H963 129 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 PEF1Q9UBV8 284 aaKnown RBP5.24□□□□□ -1.57
MSH2-204ENST00000461394 ZNF580Q9UK33 172 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 PSG8Q9UQ74 426 aa5.24□□□□□ -1.57
MSH2-204ENST00000461394 UTP20O75691 2785 aaKnown RBP5.24□□□□□ -1.57
MSH2-204ENST00000461394 MYO18BQ8IUG5 2567 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 IGKV2-40A0A087WW87 121 aaPredicted RBP5.23□□□□□ -1.57
MSH2-204ENST00000461394 SERTM2A0A1B0GWG4 89 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 TMEM89A2RUT3 159 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 DIRC3C9JPN6 131 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 M0R3E3 92 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 CHEK1O14757 476 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 BUB3O43684 328 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 SPINK4O60575 86 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 IGKV2D-40P01614 121 aaPredicted RBP5.23□□□□□ -1.57
MSH2-204ENST00000461394 IGLV2-8P01709 118 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 P01737 135 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 IGHG4P01861 327 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 APOHP02749 345 aaPredicted RBP5.23□□□□□ -1.57
MSH2-204ENST00000461394 ELANEP08246 267 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 CT45A10P0DMU9 189 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 BMI1P35226 326 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 AKR1D1P51857 326 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 NDUFA6P56556 154 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 RAB4BP61018 213 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 CFHR3Q02985 330 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 FOXE3Q13461 319 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 PSG3Q16557 428 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 C1orf194Q5T5A4 169 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 IGFL4Q6B9Z1 124 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 C10orf99Q6UWK7 81 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 TMEM86BQ8N661 226 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 SMIM12Q96EX1 92 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 SLC50A1Q9BRV3 221 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 NDFIP1Q9BT67 221 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 SRD5A3Q9H8P0 318 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 TRAPPC1Q9Y5R8 145 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 SMAD5-AS1Q9Y6J3 95 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 V9GYV3 84 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 ABCA1O95477 2261 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 FLNCQ14315 2725 aa5.23□□□□□ -1.57
MSH2-204ENST00000461394 SPTAN1Q13813 2472 aaKnown RBP5.22□□□□□ -1.57
MSH2-204ENST00000461394 KMT2BQ9UMN6 2715 aaPredicted RBP5.22□□□□□ -1.57
MSH2-204ENST00000461394 IGKV3-7A0A075B6H7 116 aa5.22□□□□□ -1.57
MSH2-204ENST00000461394 TRAV9-1A0A075B6T8 112 aa5.22□□□□□ -1.57
MSH2-204ENST00000461394 A0A087X0K7 114 aa5.22□□□□□ -1.57
MSH2-204ENST00000461394 CLPSL1A2RUU4 121 aa5.22□□□□□ -1.57
MSH2-204ENST00000461394 DNAJC9-AS1A6NH13 148 aa5.22□□□□□ -1.57
MSH2-204ENST00000461394 ZNF253O75346 499 aa5.22□□□□□ -1.57
MSH2-204ENST00000461394 LTAP01374 205 aa5.22□□□□□ -1.57
MSH2-204ENST00000461394 LGALS1P09382 135 aaKnown RBP5.22□□□□□ -1.57
MSH2-204ENST00000461394 MALP21145 153 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms