RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 NPIPB6E9PJ23 425 aa16.31■□□□□ 0.2
CLK3-202ENST00000395066 H0Y8G0 127 aa16.31■□□□□ 0.2
CLK3-202ENST00000395066 CSN3P07498 182 aa16.31■□□□□ 0.2
CLK3-202ENST00000395066 OR2T8A6NH00 312 aa16.31■□□□□ 0.2
CLK3-202ENST00000395066 TIMM23O14925 209 aa16.31■□□□□ 0.2
CLK3-202ENST00000395066 PLP1P60201 277 aa16.31■□□□□ 0.2
CLK3-202ENST00000395066 MED13LQ71F56 2210 aa16.3■□□□□ 0.2
CLK3-202ENST00000395066 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.3■□□□□ 0.2
CLK3-202ENST00000395066 ZC2HC1AQ96GY0 325 aa16.3■□□□□ 0.2
CLK3-202ENST00000395066 HSPB8Q9UJY1 196 aa16.3■□□□□ 0.2
CLK3-202ENST00000395066 HAX1O00165 279 aa16.3■□□□□ 0.2
CLK3-202ENST00000395066 MS4A6AQ9H2W1 248 aa16.3■□□□□ 0.2
CLK3-202ENST00000395066 OTORQ9NRC9 128 aa16.3■□□□□ 0.2
CLK3-202ENST00000395066 TMUB1Q9BVT8 246 aa16.29■□□□□ 0.2
CLK3-202ENST00000395066 CBY3A6NI87 242 aa16.29■□□□□ 0.2
CLK3-202ENST00000395066 M0R3E3 92 aa16.29■□□□□ 0.2
CLK3-202ENST00000395066 HLA-DRB1P01911 266 aa16.29■□□□□ 0.2
CLK3-202ENST00000395066 APOHP02749 345 aaPredicted RBP16.29■□□□□ 0.2
CLK3-202ENST00000395066 CD3EP07766 207 aa16.29■□□□□ 0.2
CLK3-202ENST00000395066 TPPP3Q9BW30 176 aa16.29■□□□□ 0.2
CLK3-202ENST00000395066 NGBQ9NPG2 151 aa16.29■□□□□ 0.2
CLK3-202ENST00000395066 HRNRQ86YZ3 2850 aaPredicted RBP16.28■□□□□ 0.2
CLK3-202ENST00000395066 FAM90A27PA6NNH2 459 aa16.28■□□□□ 0.2
CLK3-202ENST00000395066 K7EIM0 57 aa16.28■□□□□ 0.2
CLK3-202ENST00000395066 RPS20P60866 119 aaKnown RBP16.28■□□□□ 0.2
CLK3-202ENST00000395066 COTL1Q14019 142 aa16.28■□□□□ 0.2
CLK3-202ENST00000395066 PTPRQQ9UMZ3 2332 aa16.28■□□□□ 0.2
CLK3-202ENST00000395066 HTR1DP28221 377 aa16.28■□□□□ 0.2
CLK3-202ENST00000395066 KLRD1Q13241 179 aa16.28■□□□□ 0.2
CLK3-202ENST00000395066 TNFRSF14Q92956 283 aa16.28■□□□□ 0.2
CLK3-202ENST00000395066 B9A039 149 aa16.27■□□□□ 0.2
CLK3-202ENST00000395066 ARMS2P0C7Q2 107 aa16.27■□□□□ 0.2
CLK3-202ENST00000395066 ARL6IP6Q8N6S5 226 aa16.27■□□□□ 0.2
CLK3-202ENST00000395066 PMCHL2Q9BQD1 86 aa16.27■□□□□ 0.2
CLK3-202ENST00000395066 A0A087X0K7 114 aa16.27■□□□□ 0.19
CLK3-202ENST00000395066 OVOL3O00110 214 aa16.27■□□□□ 0.19
CLK3-202ENST00000395066 ARF6P62330 175 aa16.27■□□□□ 0.19
CLK3-202ENST00000395066 HIST1H1AQ02539 215 aaPredicted RBP16.27■□□□□ 0.19
CLK3-202ENST00000395066 RBPJQ06330 500 aa16.27■□□□□ 0.19
CLK3-202ENST00000395066 AMMECR1LQ6DCA0 310 aa16.27■□□□□ 0.19
CLK3-202ENST00000395066 RNF24Q9Y225 148 aa16.27■□□□□ 0.19
CLK3-202ENST00000395066 LINC01545Q5VT33 79 aa16.26■□□□□ 0.19
CLK3-202ENST00000395066 IL4P05112 153 aa16.26■□□□□ 0.19
CLK3-202ENST00000395066 NEU4Q8WWR8 484 aaPredicted RBP16.26■□□□□ 0.19
CLK3-202ENST00000395066 CST9LQ9H4G1 147 aa16.26■□□□□ 0.19
CLK3-202ENST00000395066 WNK2Q9Y3S1 2297 aa16.25■□□□□ 0.19
CLK3-202ENST00000395066 TRBV19A0A075B6N1 114 aa16.25■□□□□ 0.19
CLK3-202ENST00000395066 CD5LO43866 347 aa16.25■□□□□ 0.19
CLK3-202ENST00000395066 PPBPP02775 128 aa16.25■□□□□ 0.19
CLK3-202ENST00000395066 FCGR2BP31994 310 aaPredicted RBP16.25■□□□□ 0.19
CLK3-202ENST00000395066 C16orf54Q6UWD8 224 aa16.25■□□□□ 0.19
CLK3-202ENST00000395066 A0A1B0GUT8 65 aa16.24■□□□□ 0.19
CLK3-202ENST00000395066 LY6LH3BQJ8 138 aa16.24■□□□□ 0.19
CLK3-202ENST00000395066 IGHV3-23P01764 117 aa16.24■□□□□ 0.19
CLK3-202ENST00000395066 ZNF672Q499Z4 452 aaPredicted RBP16.24■□□□□ 0.19
CLK3-202ENST00000395066 TMEM14CQ9P0S9 112 aa16.24■□□□□ 0.19
CLK3-202ENST00000395066 ATRXP46100 2492 aa16.24■□□□□ 0.19
CLK3-202ENST00000395066 CRIP1P50238 77 aa16.24■□□□□ 0.19
CLK3-202ENST00000395066 ZNF491Q8N8L2 437 aa16.24■□□□□ 0.19
CLK3-202ENST00000395066 C8orf49Q96NF6 230 aa16.24■□□□□ 0.19
CLK3-202ENST00000395066 SHANK2-AS3Q9BTD1 123 aa16.24■□□□□ 0.19
CLK3-202ENST00000395066 AP5S1Q9NUS5 200 aa16.24■□□□□ 0.19
CLK3-202ENST00000395066 TMSB15BA0A087X1C1 80 aa16.23■□□□□ 0.19
CLK3-202ENST00000395066 GPR183P32249 361 aa16.23■□□□□ 0.19
CLK3-202ENST00000395066 SIGLEC15Q6ZMC9 328 aa16.23■□□□□ 0.19
CLK3-202ENST00000395066 CACNA1BQ00975 2339 aa16.23■□□□□ 0.19
CLK3-202ENST00000395066 ZFHX3Q15911 3703 aa16.23■□□□□ 0.19
CLK3-202ENST00000395066 PSG9Q00887 426 aa16.23■□□□□ 0.19
CLK3-202ENST00000395066 OCIAD2Q56VL3 154 aa16.23■□□□□ 0.19
CLK3-202ENST00000395066 BPIFA4PQ86YQ2 179 aa16.23■□□□□ 0.19
CLK3-202ENST00000395066 COX8AP10176 69 aa16.22■□□□□ 0.19
CLK3-202ENST00000395066 HOXB4P17483 251 aaPredicted RBP16.22■□□□□ 0.19
CLK3-202ENST00000395066 HES1Q14469 280 aa16.22■□□□□ 0.19
CLK3-202ENST00000395066 RNF125Q96EQ8 232 aa16.22■□□□□ 0.19
CLK3-202ENST00000395066 SCNM1Q9BWG6 230 aa16.22■□□□□ 0.19
CLK3-202ENST00000395066 H3BRN7 92 aa16.22■□□□□ 0.19
CLK3-202ENST00000395066 PAX2Q02962 417 aa16.22■□□□□ 0.19
CLK3-202ENST00000395066 ZNF747Q9BV97 191 aa16.22■□□□□ 0.19
CLK3-202ENST00000395066 PSG8Q9UQ74 426 aa16.22■□□□□ 0.19
CLK3-202ENST00000395066 RIGQ13278 110 aa16.21■□□□□ 0.19
CLK3-202ENST00000395066 CDSNQ15517 529 aa16.21■□□□□ 0.19
CLK3-202ENST00000395066 IGHV3OR16-8A0A075B7F1 116 aa16.21■□□□□ 0.19
CLK3-202ENST00000395066 C2orf91Q6ZV80 131 aa16.21■□□□□ 0.19
CLK3-202ENST00000395066 VPS25Q9BRG1 176 aa16.2■□□□□ 0.18
CLK3-202ENST00000395066 IGF2RP11717 2491 aa16.2■□□□□ 0.18
CLK3-202ENST00000395066 TRAV8-6A0A0B4J262 113 aa16.2■□□□□ 0.18
CLK3-202ENST00000395066 NBR2O15453 112 aa16.2■□□□□ 0.18
CLK3-202ENST00000395066 FOXC1Q12948 553 aa16.2■□□□□ 0.18
CLK3-202ENST00000395066 FA2HQ7L5A8 372 aa16.2■□□□□ 0.18
CLK3-202ENST00000395066 PEF1Q9UBV8 284 aaKnown RBP16.2■□□□□ 0.18
CLK3-202ENST00000395066 TRBV6-1A0A0K0K1D8 114 aa16.19■□□□□ 0.18
CLK3-202ENST00000395066 NCR2O95944 276 aa16.19■□□□□ 0.18
CLK3-202ENST00000395066 FAM106CPP0CH98 169 aa16.19■□□□□ 0.18
CLK3-202ENST00000395066 CSN1S1P47710 185 aa16.19■□□□□ 0.18
CLK3-202ENST00000395066 FOXE3Q13461 319 aa16.19■□□□□ 0.18
CLK3-202ENST00000395066 FAM106AQ4KMX7 169 aa16.19■□□□□ 0.18
CLK3-202ENST00000395066 OR10AG1Q8NH19 301 aa16.19■□□□□ 0.18
CLK3-202ENST00000395066 PRSS3P2Q8NHM4 247 aa16.19■□□□□ 0.18
CLK3-202ENST00000395066 SNAI2O43623 268 aa16.19■□□□□ 0.18
CLK3-202ENST00000395066 PSG3Q16557 428 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms