RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 GAGE4Q13068 117 aa18.12■□□□□ 0.49
FOXP4-204ENST00000373063 GAGE5Q13069 117 aa18.12■□□□□ 0.49
FOXP4-204ENST00000373063 GAGE13Q4V321 117 aa18.12■□□□□ 0.49
FOXP4-204ENST00000373063 FAM120AOSQ5T036 256 aa18.12■□□□□ 0.49
FOXP4-204ENST00000373063 SSBP2P81877 361 aaPredicted RBP18.12■□□□□ 0.49
FOXP4-204ENST00000373063 NHP2Q9NX24 153 aaKnown RBP18.12■□□□□ 0.49
FOXP4-204ENST00000373063 FAM90A2PQ658T7 463 aa18.11■□□□□ 0.49
FOXP4-204ENST00000373063 M0R2P5 195 aa18.11■□□□□ 0.49
FOXP4-204ENST00000373063 GRNP28799 593 aaKnown RBP18.11■□□□□ 0.49
FOXP4-204ENST00000373063 SLC25A2Q9BXI2 301 aa18.11■□□□□ 0.49
FOXP4-204ENST00000373063 K7EM74 188 aa18.11■□□□□ 0.49
FOXP4-204ENST00000373063 CNOT1A5YKK6 2376 aaKnown RBP18.11■□□□□ 0.49
FOXP4-204ENST00000373063 IGHV3-16A0A0C4DH30 117 aa18.11■□□□□ 0.49
FOXP4-204ENST00000373063 TEX36Q5VZQ5 186 aa18.11■□□□□ 0.49
FOXP4-204ENST00000373063 AZU1P20160 251 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 KIF26BQ2KJY2 2108 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 PAX9P55771 341 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 DERL1Q9BUN8 251 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 SPCS1Q9Y6A9 102 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 GAGE12BA1L429 117 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 GAGE7O76087 117 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 GAGE12FP0CL80 117 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 GAGE12GP0CL81 117 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 GAGE12IP0CL82 117 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 DMRT1Q9Y5R6 373 aa18.1■□□□□ 0.49
FOXP4-204ENST00000373063 PLEKHB2Q96CS7 222 aa18.09■□□□□ 0.49
FOXP4-204ENST00000373063 MS4A6AQ9H2W1 248 aa18.09■□□□□ 0.49
FOXP4-204ENST00000373063 TMEM238C9JI98 176 aa18.09■□□□□ 0.49
FOXP4-204ENST00000373063 ZNF561-AS1K7EIQ3 104 aa18.09■□□□□ 0.49
FOXP4-204ENST00000373063 IGLV1-44P01699 117 aa18.09■□□□□ 0.49
FOXP4-204ENST00000373063 C17orf58Q2M2W7 97 aa18.09■□□□□ 0.49
FOXP4-204ENST00000373063 DMRTC2Q8IXT2 367 aaPredicted RBP18.09■□□□□ 0.49
FOXP4-204ENST00000373063 MYO7BQ6PIF6 2116 aa18.09■□□□□ 0.49
FOXP4-204ENST00000373063 IGLV3-9A0A075B6K5 115 aa18.09■□□□□ 0.49
FOXP4-204ENST00000373063 FREM3P0C091 2139 aa18.09■□□□□ 0.49
FOXP4-204ENST00000373063 ZNF503-AS2A6NEH8 195 aa18.08■□□□□ 0.49
FOXP4-204ENST00000373063 DEFB112Q30KQ8 113 aa18.08■□□□□ 0.49
FOXP4-204ENST00000373063 ALPK2Q86TB3 2170 aa18.08■□□□□ 0.49
FOXP4-204ENST00000373063 A8MXK9 166 aa18.08■□□□□ 0.49
FOXP4-204ENST00000373063 INS-IGF2F8WCM5 200 aa18.08■□□□□ 0.49
FOXP4-204ENST00000373063 SLX1AQ9BQ83 275 aa18.08■□□□□ 0.48
FOXP4-204ENST00000373063 TSSC4Q9Y5U2 329 aaPredicted RBP18.08■□□□□ 0.48
FOXP4-204ENST00000373063 FRMPD3Q5JV73 1810 aa18.08■□□□□ 0.48
FOXP4-204ENST00000373063 NDUFA4O00483 81 aa18.08■□□□□ 0.48
FOXP4-204ENST00000373063 CLDN16Q9Y5I7 305 aa18.08■□□□□ 0.48
FOXP4-204ENST00000373063 SPTBN2O15020 2390 aa18.08■□□□□ 0.48
FOXP4-204ENST00000373063 A0A0G2JRQ6 117 aa18.07■□□□□ 0.48
FOXP4-204ENST00000373063 SMPXQ9UHP9 88 aa18.07■□□□□ 0.48
FOXP4-204ENST00000373063 DMRTA1Q5VZB9 504 aa18.07■□□□□ 0.48
FOXP4-204ENST00000373063 RPP25LQ8N5L8 163 aaKnown RBP18.07■□□□□ 0.48
FOXP4-204ENST00000373063 RLFQ13129 1914 aa18.07■□□□□ 0.48
FOXP4-204ENST00000373063 WT1P19544 449 aaPredicted RBP18.07■□□□□ 0.48
FOXP4-204ENST00000373063 LMO1P25800 156 aa18.07■□□□□ 0.48
FOXP4-204ENST00000373063 YPEL3P61236 119 aaPredicted RBP18.07■□□□□ 0.48
FOXP4-204ENST00000373063 PDE6HQ13956 83 aa18.07■□□□□ 0.48
FOXP4-204ENST00000373063 TRPT1Q86TN4 253 aaKnown RBP18.07■□□□□ 0.48
FOXP4-204ENST00000373063 COL6A6A6NMZ7 2263 aa18.07■□□□□ 0.48
FOXP4-204ENST00000373063 FNDC10F2Z333 226 aa18.07■□□□□ 0.48
FOXP4-204ENST00000373063 Q86TA4 180 aa18.07■□□□□ 0.48
FOXP4-204ENST00000373063 SPOCK3Q9BQ16 436 aa18.07■□□□□ 0.48
FOXP4-204ENST00000373063 TANC1Q9C0D5 1861 aa18.06■□□□□ 0.48
FOXP4-204ENST00000373063 ETV2O00321 342 aaPredicted RBP18.06■□□□□ 0.48
FOXP4-204ENST00000373063 NDUFS7O75251 213 aa18.06■□□□□ 0.48
FOXP4-204ENST00000373063 IGHV2-5P01817 119 aa18.06■□□□□ 0.48
FOXP4-204ENST00000373063 ARMS2P0C7Q2 107 aa18.06■□□□□ 0.48
FOXP4-204ENST00000373063 WDR86Q86TI4 376 aa18.06■□□□□ 0.48
FOXP4-204ENST00000373063 VPREB3Q9UKI3 123 aa18.06■□□□□ 0.48
FOXP4-204ENST00000373063 GVINP1Q7Z2Y8 2422 aa18.06■□□□□ 0.48
FOXP4-204ENST00000373063 TRAV9-2A0A087WT02 112 aa18.06■□□□□ 0.48
FOXP4-204ENST00000373063 A0A1B0GV72 72 aa18.06■□□□□ 0.48
FOXP4-204ENST00000373063 LIME1Q9H400 295 aa18.06■□□□□ 0.48
FOXP4-204ENST00000373063 SHISA9B4DS77 424 aa18.05■□□□□ 0.48
FOXP4-204ENST00000373063 ELANEP08246 267 aa18.05■□□□□ 0.48
FOXP4-204ENST00000373063 WDR81Q562E7 1941 aa18.05■□□□□ 0.48
FOXP4-204ENST00000373063 HOXB4P17483 251 aaPredicted RBP18.05■□□□□ 0.48
FOXP4-204ENST00000373063 TRBV25-1A0A075B6N4 114 aa18.05■□□□□ 0.48
FOXP4-204ENST00000373063 NDUFA4L2Q9NRX3 87 aa18.05■□□□□ 0.48
FOXP4-204ENST00000373063 IGHV4-59P01825 116 aa18.04■□□□□ 0.48
FOXP4-204ENST00000373063 NUP35Q8NFH5 326 aa18.04■□□□□ 0.48
FOXP4-204ENST00000373063 H3BUT2 72 aa18.04■□□□□ 0.48
FOXP4-204ENST00000373063 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.04■□□□□ 0.48
FOXP4-204ENST00000373063 CGB7P0DN87 165 aa18.04■□□□□ 0.48
FOXP4-204ENST00000373063 LINC01559Q495D7 138 aa18.04■□□□□ 0.48
FOXP4-204ENST00000373063 RHODO00212 210 aa18.04■□□□□ 0.48
FOXP4-204ENST00000373063 FGF16O43320 207 aa18.04■□□□□ 0.48
FOXP4-204ENST00000373063 SMKR1H3BMG3 65 aa18.04■□□□□ 0.48
FOXP4-204ENST00000373063 LURAP1LQ8IV03 231 aa18.04■□□□□ 0.48
FOXP4-204ENST00000373063 C5orf30Q96GV9 206 aa18.03■□□□□ 0.48
FOXP4-204ENST00000373063 LAMTOR3Q9UHA4 124 aa18.03■□□□□ 0.48
FOXP4-204ENST00000373063 TRAV12-2A0A075B6T6 113 aa18.03■□□□□ 0.48
FOXP4-204ENST00000373063 TMEM14BQ9NUH8 114 aa18.03■□□□□ 0.48
FOXP4-204ENST00000373063 KLF2Q9Y5W3 355 aaPredicted RBP18.03■□□□□ 0.48
FOXP4-204ENST00000373063 C8orf86Q6ZUL3 223 aa18.02■□□□□ 0.48
FOXP4-204ENST00000373063 RMI2Q96E14 147 aa18.02■□□□□ 0.48
FOXP4-204ENST00000373063 NCOR1P1Q9H4R4 102 aa18.02■□□□□ 0.48
FOXP4-204ENST00000373063 MRPL27Q9P0M9 148 aaKnown RBP18.02■□□□□ 0.47
FOXP4-204ENST00000373063 ERG28Q9UKR5 140 aa18.02■□□□□ 0.47
FOXP4-204ENST00000373063 IGHV1OR15-1A0A075B7D0 117 aa18.02■□□□□ 0.47
FOXP4-204ENST00000373063 TRAV8-2A0A0B4J237 113 aa18.02■□□□□ 0.47
FOXP4-204ENST00000373063 TRAV1-1A0A0B4J248 108 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms