RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 FRMPD3Q5JV73 1810 aa11.41□□□□□ -0.58
PDE4D-203ENST00000340635 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
PDE4D-203ENST00000340635 VWC2Q2TAL6 325 aa11.4□□□□□ -0.58
PDE4D-203ENST00000340635 SMKR1H3BMG3 65 aa11.4□□□□□ -0.58
PDE4D-203ENST00000340635 GATA4P43694 442 aa11.4□□□□□ -0.58
PDE4D-203ENST00000340635 LINC01590Q5TEZ4 76 aa11.4□□□□□ -0.58
PDE4D-203ENST00000340635 ANAPC1Q9H1A4 1944 aa11.4□□□□□ -0.58
PDE4D-203ENST00000340635 C14orf132Q9NPU4 83 aa11.4□□□□□ -0.58
PDE4D-203ENST00000340635 SHISA9B4DS77 424 aa11.4□□□□□ -0.58
PDE4D-203ENST00000340635 PKIGQ9Y2B9 76 aa11.4□□□□□ -0.59
PDE4D-203ENST00000340635 TRAV13-2A0A0B4J235 113 aa11.4□□□□□ -0.59
PDE4D-203ENST00000340635 IGHG2P01859 326 aa11.4□□□□□ -0.59
PDE4D-203ENST00000340635 APOC4P55056 127 aa11.4□□□□□ -0.59
PDE4D-203ENST00000340635 H3BUX3 64 aa11.39□□□□□ -0.59
PDE4D-203ENST00000340635 ZMAT4Q9H898 229 aa11.39□□□□□ -0.59
PDE4D-203ENST00000340635 PSPNO60542 156 aa11.39□□□□□ -0.59
PDE4D-203ENST00000340635 RNF126Q9BV68 326 aa11.39□□□□□ -0.59
PDE4D-203ENST00000340635 CHCHD2Q9Y6H1 151 aaPredicted RBP11.39□□□□□ -0.59
PDE4D-203ENST00000340635 I3L3M4 83 aa11.39□□□□□ -0.59
PDE4D-203ENST00000340635 TRGV9Q99603 122 aa11.39□□□□□ -0.59
PDE4D-203ENST00000340635 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.39□□□□□ -0.59
PDE4D-203ENST00000340635 SRSF3P84103 164 aaKnown RBP11.39□□□□□ -0.59
PDE4D-203ENST00000340635 TMEM141Q96I45 108 aa11.39□□□□□ -0.59
PDE4D-203ENST00000340635 COL5A3P25940 1745 aaPredicted RBP11.39□□□□□ -0.59
PDE4D-203ENST00000340635 VWA8A3KMH1 1905 aa11.39□□□□□ -0.59
PDE4D-203ENST00000340635 C9orf106Q8NAJ2 232 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 PPDPFLQ8WWR9 84 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 MRPL27Q9P0M9 148 aaKnown RBP11.38□□□□□ -0.59
PDE4D-203ENST00000340635 TP53TG1Q9Y2A0 90 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 IGHV3-16A0A0C4DH30 117 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 AZU1P20160 251 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 TMEM256Q8N2U0 113 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 MINOS1Q5TGZ0 78 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 ZCCHC24Q8N2G6 241 aaKnown RBP11.38□□□□□ -0.59
PDE4D-203ENST00000340635 MINOS1-NBL1R4GNA1 71 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 C1QCP02747 245 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 LINC00271P0C7V0 271 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 COL18A1P39060 1754 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 B4DSR2 109 aa11.38□□□□□ -0.59
PDE4D-203ENST00000340635 A0A1B0GWJ7 208 aa11.37□□□□□ -0.59
PDE4D-203ENST00000340635 FGF6P10767 208 aa11.37□□□□□ -0.59
PDE4D-203ENST00000340635 ANKRD29Q8N6D5 301 aa11.37□□□□□ -0.59
PDE4D-203ENST00000340635 C1orf53Q5VUE5 145 aa11.37□□□□□ -0.59
PDE4D-203ENST00000340635 MPZP25189 248 aa11.37□□□□□ -0.59
PDE4D-203ENST00000340635 TMEM243Q9BU79 118 aa11.37□□□□□ -0.59
PDE4D-203ENST00000340635 DKK1O94907 266 aa11.37□□□□□ -0.59
PDE4D-203ENST00000340635 CXCL1P09341 107 aa11.37□□□□□ -0.59
PDE4D-203ENST00000340635 FUSP35637 526 aaKnown RBP eCLIP11.37□□□□□ -0.59
PDE4D-203ENST00000340635 CACNA1GO43497 2377 aa11.37□□□□□ -0.59
PDE4D-203ENST00000340635 RHODO00212 210 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 TIAF1O95411 115 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 CRYGCP07315 174 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 C4orf48Q5BLP8 95 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 A0A1B0GTI1 187 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 FGF16O43320 207 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 IGKV1D-13A0A0B4J2D9 117 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 NDUFB1O75438 58 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 TFF1P04155 84 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 IGKV1-13P0DP09 117 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 IGHV1-3A0A0C4DH29 117 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 RNASE2P10153 161 aaKnown RBP11.36□□□□□ -0.59
PDE4D-203ENST00000340635 MP68P56378 58 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 ID3Q02535 119 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 LY6DQ14210 128 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 CSRP2Q16527 193 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 GREM1O60565 184 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 DAZ1Q9NQZ3 744 aaKnown RBP11.36□□□□□ -0.59
PDE4D-203ENST00000340635 A0A1W2PR77 199 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
PDE4D-203ENST00000340635 COLCA2A8K830 154 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 POU2AF1Q16633 256 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 TREML4Q6UXN2 200 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 BRD3OSQ6XYD6 125 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 ATP6V0BQ99437 205 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 NYNRINQ9P2P1 1898 aaKnown RBP11.35□□□□□ -0.59
PDE4D-203ENST00000340635 A0A1B0GW64 132 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 F8W1H4 67 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 RHPN1-AS1Q9BWJ2 59 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 XCL2Q9UBD3 114 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 C20orf204Q6ZNR8 217 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 STPG4Q8N801 248 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 VSIRQ9H7M9 311 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 RFNGQ9Y644 331 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 KIF26AQ9ULI4 1882 aaPredicted RBP11.35□□□□□ -0.59
PDE4D-203ENST00000340635 ANGP03950 147 aaKnown RBP11.35□□□□□ -0.59
PDE4D-203ENST00000340635 C3orf79P0CE67 100 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 CRYBA4P53673 196 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 ZNF329Q86UD4 541 aa11.35□□□□□ -0.59
PDE4D-203ENST00000340635 IL17RELQ6ZVW7 336 aa11.34□□□□□ -0.59
PDE4D-203ENST00000340635 WISP3O95389 354 aaPredicted RBP11.34□□□□□ -0.59
PDE4D-203ENST00000340635 EFNA4P52798 201 aa11.34□□□□□ -0.59
PDE4D-203ENST00000340635 DEFB131AP59861 70 aa11.34□□□□□ -0.59
PDE4D-203ENST00000340635 FBLN5Q9UBX5 448 aa11.34□□□□□ -0.59
PDE4D-203ENST00000340635 SPTAN1Q13813 2472 aaKnown RBP11.34□□□□□ -0.59
PDE4D-203ENST00000340635 CARD19Q96LW7 228 aa11.34□□□□□ -0.59
PDE4D-203ENST00000340635 IGKV1-5P01602 117 aa11.34□□□□□ -0.59
PDE4D-203ENST00000340635 SYNJ2BPP57105 145 aa11.34□□□□□ -0.59
PDE4D-203ENST00000340635 TMEM200BQ69YZ2 307 aa11.34□□□□□ -0.59
PDE4D-203ENST00000340635 TRAV1-1A0A0B4J248 108 aa11.34□□□□□ -0.59
PDE4D-203ENST00000340635 CLPSL2Q6UWE3 100 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms