RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 PSG3Q16557 428 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 SIGLEC15Q6ZMC9 328 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 DTX2Q86UW9 622 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 DYNAPQ8N1N2 210 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 SERTM2A0A1B0GWG4 89 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 VWC2LB2RUY7 222 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 NDPQ00604 133 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 ZNF414Q96IQ9 312 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 DOPEY2Q9Y3R5 2298 aa10.71□□□□□ -0.7
CDH8-201ENST00000299345 C20orf202A1L168 122 aa10.71□□□□□ -0.7
CDH8-201ENST00000299345 PMCHL1Q16048 86 aa10.71□□□□□ -0.7
CDH8-201ENST00000299345 LCN12Q6JVE5 192 aa10.71□□□□□ -0.7
CDH8-201ENST00000299345 TMEM75Q8N9X5 138 aa10.71□□□□□ -0.7
CDH8-201ENST00000299345 TMEM190Q8WZ59 177 aa10.71□□□□□ -0.7
CDH8-201ENST00000299345 RNF114Q9Y508 228 aa10.71□□□□□ -0.7
CDH8-201ENST00000299345 A0A1B0GXF2 115 aa10.7□□□□□ -0.7
CDH8-201ENST00000299345 IGLC2P0DOY2 106 aa10.7□□□□□ -0.7
CDH8-201ENST00000299345 HOXB4P17483 251 aaPredicted RBP10.7□□□□□ -0.7
CDH8-201ENST00000299345 Q6ZN92 141 aa10.7□□□□□ -0.7
CDH8-201ENST00000299345 TTC9CQ8N5M4 171 aa10.7□□□□□ -0.7
CDH8-201ENST00000299345 ZC2HC1AQ96GY0 325 aa10.7□□□□□ -0.7
CDH8-201ENST00000299345 HIVEP3Q5T1R4 2406 aa10.7□□□□□ -0.7
CDH8-201ENST00000299345 M0QZ24 198 aa10.7□□□□□ -0.7
CDH8-201ENST00000299345 BTF3P20290 206 aaKnown RBP10.7□□□□□ -0.7
CDH8-201ENST00000299345 GPR183P32249 361 aa10.7□□□□□ -0.7
CDH8-201ENST00000299345 KALRNO60229 2985 aa10.7□□□□□ -0.7
CDH8-201ENST00000299345 FAM181BA6NEQ2 426 aa10.7□□□□□ -0.7
CDH8-201ENST00000299345 HNRNPA3P51991 378 aaKnown RBP10.7□□□□□ -0.7
CDH8-201ENST00000299345 KLF5Q13887 457 aaPredicted RBP10.7□□□□□ -0.7
CDH8-201ENST00000299345 WI2-2373I1.2A0A1W2PRP0 233 aa10.69□□□□□ -0.7
CDH8-201ENST00000299345 TMEM189A5PLL7 270 aa10.69□□□□□ -0.7
CDH8-201ENST00000299345 H0Y8G0 127 aa10.69□□□□□ -0.7
CDH8-201ENST00000299345 PDE6HQ13956 83 aa10.69□□□□□ -0.7
CDH8-201ENST00000299345 RELQ04864 619 aaPredicted RBP10.69□□□□□ -0.7
CDH8-201ENST00000299345 BPESC1Q9GZL8 116 aa10.69□□□□□ -0.7
CDH8-201ENST00000299345 UQCR10Q9UDW1 63 aa10.69□□□□□ -0.7
CDH8-201ENST00000299345 LEPROTL1O95214 131 aa10.69□□□□□ -0.7
CDH8-201ENST00000299345 NDFIP1Q9BT67 221 aa10.69□□□□□ -0.7
CDH8-201ENST00000299345 CLEC5AQ9NY25 188 aa10.69□□□□□ -0.7
CDH8-201ENST00000299345 SMG1Q96Q15 3661 aaKnown RBP10.68□□□□□ -0.7
CDH8-201ENST00000299345 G0S2P27469 103 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 BCL6BQ8N143 479 aaPredicted RBP10.68□□□□□ -0.7
CDH8-201ENST00000299345 LOC102724200A0A096LPH7 203 aaPredicted RBP10.68□□□□□ -0.7
CDH8-201ENST00000299345 IGHV2-70DA0A0C4DH43 119 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 GOSR1O95249 250 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 RAB4AP20338 218 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 SAA4P35542 130 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 UBE2E1P51965 193 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 NUTF2P61970 127 aaKnown RBP10.68□□□□□ -0.7
CDH8-201ENST00000299345 C15orf32Q32M92 178 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 PRSS3P2Q8NHM4 247 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 TMEM70Q9BUB7 260 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 SH2D7A6NKC9 451 aaPredicted RBP10.68□□□□□ -0.7
CDH8-201ENST00000299345 IGLV2-11P01706 119 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 ARMS2P0C7Q2 107 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 LINC00614P0C842 121 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 FBLN7Q53RD9 439 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 SAPCD1Q5SSQ6 148 aa10.68□□□□□ -0.7
CDH8-201ENST00000299345 IGKV2-40A0A087WW87 121 aaPredicted RBP10.67□□□□□ -0.7
CDH8-201ENST00000299345 IGHV7-81A0A0B4J1V7 117 aa10.67□□□□□ -0.7
CDH8-201ENST00000299345 IGKV2D-40P01614 121 aaPredicted RBP10.67□□□□□ -0.7
CDH8-201ENST00000299345 RHOGP84095 191 aa10.67□□□□□ -0.7
CDH8-201ENST00000299345 FAM120AOSQ5T036 256 aa10.67□□□□□ -0.7
CDH8-201ENST00000299345 FA2HQ7L5A8 372 aa10.67□□□□□ -0.7
CDH8-201ENST00000299345 HSBP1L1C9JCN9 74 aa10.67□□□□□ -0.7
CDH8-201ENST00000299345 RPLP1P05386 114 aaKnown RBP10.67□□□□□ -0.7
CDH8-201ENST00000299345 Q6AWC8 147 aa10.67□□□□□ -0.7
CDH8-201ENST00000299345 CLEC3BP05452 202 aa10.67□□□□□ -0.7
CDH8-201ENST00000299345 CHCHD1Q96BP2 118 aaKnown RBP10.67□□□□□ -0.7
CDH8-201ENST00000299345 A0A1W2PPR1 153 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 HAX1O00165 279 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 C8orf49Q96NF6 230 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 SIRPDQ9H106 197 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 DCHS1Q96JQ0 3298 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 IGHV3OR16-10A0A075B7F0 116 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 NPIPB6E9PJ23 425 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 ZNF138P52744 262 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 IGFL4Q6B9Z1 124 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 Q8N9W7 124 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 IGHV3OR16-13A0A075B7E8 117 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 IGHV3-74A0A0B4J1X5 117 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 TRBV6-1A0A0K0K1D8 114 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 CTSGP08311 255 aa10.66□□□□□ -0.7
CDH8-201ENST00000299345 ZNF48Q96MX3 618 aaPredicted RBP10.66□□□□□ -0.7
CDH8-201ENST00000299345 CLEC19AQ6UXS0 136 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 SPG11Q96JI7 2443 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 IGHV3-66A0A0C4DH42 116 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 MUC21A0A0G2JKD1 596 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 MUC21A0A140T8X8 626 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 A0A1B0GW15 77 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 ATP6V0E1O15342 81 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 ORM1P02763 201 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 GNLYP22749 145 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 BMI1P35226 326 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 MUC21Q5SSG8 566 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 EBLN2Q6P2I7 272 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 Q71RC1 249 aaPredicted RBP10.65□□□□□ -0.7
CDH8-201ENST00000299345 MAP1LC3CQ9BXW4 147 aa10.65□□□□□ -0.7
CDH8-201ENST00000299345 TACC2O95359 2948 aa10.65□□□□□ -0.71
CDH8-201ENST00000299345 ZNF25P17030 456 aaPredicted RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms