RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-208	ENST00000585956	CACFD1	Q9UGQ2	172 aa		13.63	□□□□□ -0.23
PTBP1-208	ENST00000585956	PFDN2	Q9UHV9	154 aa		13.63	□□□□□ -0.23
PTBP1-208	ENST00000585956	LYRM9	A8MSI8	78 aa		13.62	□□□□□ -0.23
PTBP1-208	ENST00000585956	INS	P01308	110 aa		13.62	□□□□□ -0.23
PTBP1-208	ENST00000585956	ALDH3B2	P48448	385 aa		13.62	□□□□□ -0.23
PTBP1-208	ENST00000585956	FAM3B	P58499	235 aa	Predicted RBP	13.62	□□□□□ -0.23
PTBP1-208	ENST00000585956	KIR3DS1	Q14943	382 aa		13.62	□□□□□ -0.23
PTBP1-208	ENST00000585956		H3BP45	60 aa		13.61	□□□□□ -0.23
PTBP1-208	ENST00000585956		H3BRN7	92 aa		13.61	□□□□□ -0.23
PTBP1-208	ENST00000585956	MEOX2	P50222	304 aa		13.61	□□□□□ -0.23
PTBP1-208	ENST00000585956	ATP5I	P56385	69 aa	Predicted RBP	13.61	□□□□□ -0.23
PTBP1-208	ENST00000585956	KRTAP10-2	P60368	255 aa		13.61	□□□□□ -0.23
PTBP1-208	ENST00000585956	TMED4	Q7Z7H5	227 aa		13.61	□□□□□ -0.23
PTBP1-208	ENST00000585956	OR1B1	Q8NGR6	318 aa		13.61	□□□□□ -0.23
PTBP1-208	ENST00000585956	SCP2D1	Q9UJQ7	156 aa		13.61	□□□□□ -0.23
PTBP1-208	ENST00000585956	WRB	O00258	174 aa		13.6	□□□□□ -0.23
PTBP1-208	ENST00000585956	FABP1	P07148	127 aa		13.6	□□□□□ -0.23
PTBP1-208	ENST00000585956	FGL1	Q08830	312 aa		13.6	□□□□□ -0.23
PTBP1-208	ENST00000585956	ACOT7L	Q6ZUV0	252 aa		13.6	□□□□□ -0.23
PTBP1-208	ENST00000585956	BOLA2-SMG1P6	H3BVE0	249 aa		13.59	□□□□□ -0.23
PTBP1-208	ENST00000585956	CCNK	O75909	580 aa		13.59	□□□□□ -0.23
PTBP1-208	ENST00000585956	TSPO	P30536	169 aa		13.59	□□□□□ -0.23
PTBP1-208	ENST00000585956	RAB11A	P62491	216 aa		13.59	□□□□□ -0.23
PTBP1-208	ENST00000585956	SPATA12	Q7Z6I5	190 aa		13.59	□□□□□ -0.23
PTBP1-208	ENST00000585956	ZNF738	Q8NE65	137 aa		13.59	□□□□□ -0.23
PTBP1-208	ENST00000585956	OR4D5	Q8NGN0	318 aa		13.59	□□□□□ -0.23
PTBP1-208	ENST00000585956	UHRF2	Q96PU4	802 aa		13.59	□□□□□ -0.23
PTBP1-208	ENST00000585956	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.59	□□□□□ -0.23
PTBP1-208	ENST00000585956	SLC45A2	Q9UMX9	530 aa		13.59	□□□□□ -0.23
PTBP1-208	ENST00000585956	SRPX	P78539	464 aa		13.58	□□□□□ -0.24
PTBP1-208	ENST00000585956	HIST1H1A	Q02539	215 aa	Predicted RBP	13.58	□□□□□ -0.24
PTBP1-208	ENST00000585956	GGNBP1	Q5YKI7	109 aa		13.58	□□□□□ -0.24
PTBP1-208	ENST00000585956	TRIM63	Q969Q1	353 aa		13.58	□□□□□ -0.24
PTBP1-208	ENST00000585956	SLIRP	Q9GZT3	109 aa	Known RBP	13.58	□□□□□ -0.24
PTBP1-208	ENST00000585956	SYNGR2	O43760	224 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	DUSP14	O95147	198 aa	Known RBP	13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	SNRPC	P09234	159 aa	Known RBP	13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	ANXA3	P12429	323 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	HTN1	P15515	57 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	CXCL3	P19876	107 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	TNFSF8	P32971	234 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	SPANXN5	Q5MJ07	72 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	SAMD13	Q5VXD3	122 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	SSX7	Q7RTT5	188 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	GPR141	Q7Z602	305 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956		Q8N1X5	172 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	LRTM2	Q8N967	370 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	BPIFC	Q8NFQ6	507 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	LINC01587	Q99440	93 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	SHANK2-AS3	Q9BTD1	123 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	TMEM147	Q9BVK8	224 aa		13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	CCDC59	Q9P031	241 aa	Known RBP	13.57	□□□□□ -0.24
PTBP1-208	ENST00000585956	CBY3	A6NI87	242 aa		13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	PMS2P5	A8MQ11	134 aa		13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	MRPS12	O15235	138 aa	Known RBP	13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	ATP5G1	P05496	136 aa		13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	HOXB5	P09067	269 aa		13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	ATP5G3	P48201	142 aa		13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	AKR1C1	Q04828	323 aa		13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	PPP1R1A	Q13522	171 aa		13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	PATE2	Q6UY27	113 aa		13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	OR8A1	Q8NGG7	326 aa		13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	SCGB3A2	Q96PL1	93 aa		13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	NOP10	Q9NPE3	64 aa	Known RBP	13.56	□□□□□ -0.24
PTBP1-208	ENST00000585956	DUXB	A0A1W2PPF3	345 aa		13.55	□□□□□ -0.24
PTBP1-208	ENST00000585956	SLC25A6	P12236	298 aa		13.55	□□□□□ -0.24
PTBP1-208	ENST00000585956	HOXA5	P20719	270 aa		13.55	□□□□□ -0.24
PTBP1-208	ENST00000585956	VAMP1	P23763	118 aa		13.55	□□□□□ -0.24
PTBP1-208	ENST00000585956	TMEM128	Q5BJH2	165 aa		13.55	□□□□□ -0.24
PTBP1-208	ENST00000585956	CYP2G1P	Q6ZSU1	146 aa		13.55	□□□□□ -0.24
PTBP1-208	ENST00000585956	RNASE8	Q8TDE3	154 aa	Known RBP	13.55	□□□□□ -0.24
PTBP1-208	ENST00000585956	RABL2B	Q9UNT1	228 aa		13.55	□□□□□ -0.24
PTBP1-208	ENST00000585956	MYCBP2	O75592	4640 aa		13.55	□□□□□ -0.24
PTBP1-208	ENST00000585956	VPS13B	Q7Z7G8	4022 aa		13.55	□□□□□ -0.24
PTBP1-208	ENST00000585956	SFT2D2	O95562	160 aa		13.54	□□□□□ -0.24
PTBP1-208	ENST00000585956	CFD	P00746	253 aa	Predicted RBP	13.54	□□□□□ -0.24
PTBP1-208	ENST00000585956	FUS	P35637	526 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	2e-6	■□□□□ 8.1
PTBP1-208	ENST00000585956	SCRT2	Q9NQ03	307 aa		13.54	□□□□□ -0.24
PTBP1-208	ENST00000585956	RSL24D1	Q9UHA3	163 aa	Known RBP	13.54	□□□□□ -0.24
PTBP1-208	ENST00000585956		A0A087X0K7	114 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956		A0A0J9YY99	117 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	PRAC2	D3DTV9	90 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	ADAP1	O75689	374 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	CCL18	P55774	89 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	TAS2R60	P59551	318 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	POLR2G	P62487	172 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	RHOB	P62745	196 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	TMEM144	Q7Z5S9	345 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	GPR82	Q96P67	336 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	MRPS26	Q9BYN8	205 aa	Known RBP	13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956		Q9H8V8	135 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	HIGD1A	Q9Y241	93 aa		13.53	□□□□□ -0.24
PTBP1-208	ENST00000585956	TRAV26-1	A0A087WT03	109 aa		13.52	□□□□□ -0.25
PTBP1-208	ENST00000585956	SMCO3	A2RU48	225 aa		13.52	□□□□□ -0.25
PTBP1-208	ENST00000585956	FABP12	A6NFH5	140 aa		13.52	□□□□□ -0.25
PTBP1-208	ENST00000585956	LINC00869	P0C866	280 aa		13.52	□□□□□ -0.25
PTBP1-208	ENST00000585956	PSG3	Q16557	428 aa		13.52	□□□□□ -0.25
PTBP1-208	ENST00000585956	LINC00612	Q8N6U2	182 aa		13.52	□□□□□ -0.25
PTBP1-208	ENST00000585956	C16orf74	Q96GX8	76 aa		13.52	□□□□□ -0.25
PTBP1-208	ENST00000585956		H3BTX0	84 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 83 ms