RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 OCC1Q8TAD7 63 aa22.54■■□□□ 1.2
CTDNEP1-208ENST00000573600 OTORQ9NRC9 128 aa22.54■■□□□ 1.2
CTDNEP1-208ENST00000573600 ZFHX3Q15911 3703 aa22.53■■□□□ 1.2
CTDNEP1-208ENST00000573600 TRBV19A0A075B6N1 114 aa22.53■■□□□ 1.2
CTDNEP1-208ENST00000573600 RPL7P18124 248 aaKnown RBP22.53■■□□□ 1.2
CTDNEP1-208ENST00000573600 SRP14P37108 136 aaKnown RBP22.53■■□□□ 1.2
CTDNEP1-208ENST00000573600 FAM24BQ8N5W8 94 aa22.53■■□□□ 1.2
CTDNEP1-208ENST00000573600 C5orf17Q8NAS9 161 aa22.53■■□□□ 1.2
CTDNEP1-208ENST00000573600 YPEL4Q96NS1 127 aa22.53■■□□□ 1.2
CTDNEP1-208ENST00000573600 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP22.52■■□□□ 1.2
CTDNEP1-208ENST00000573600 IGHV3-35A0A0C4DH35 117 aa22.52■■□□□ 1.2
CTDNEP1-208ENST00000573600 IGHG4P01861 327 aa22.52■■□□□ 1.2
CTDNEP1-208ENST00000573600 ARL3P36405 182 aa22.52■■□□□ 1.2
CTDNEP1-208ENST00000573600 LYPD1Q8N2G4 141 aa22.52■■□□□ 1.2
CTDNEP1-208ENST00000573600 KLK15Q9H2R5 256 aa22.52■■□□□ 1.2
CTDNEP1-208ENST00000573600 ITPR3Q14573 2671 aa22.52■■□□□ 1.19
CTDNEP1-208ENST00000573600 PGPEP1LA6NFU8 196 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 KRTAP1-1Q07627 177 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 CENPWQ5EE01 88 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 IL17RELQ6ZVW7 336 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 CDC42EP3Q9UKI2 254 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 ZANQ9Y493 2812 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 PPP5D1E7EU14 171 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 H3BTX0 84 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 H7BYZ3 331 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 PPP1R2P9O14990 202 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 PDE6HQ13956 83 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 TMEM95Q3KNT9 176 aa22.51■■□□□ 1.19
CTDNEP1-208ENST00000573600 ELOBQ15370 118 aa22.49■■□□□ 1.19
CTDNEP1-208ENST00000573600 ZNF702PQ9H963 129 aa22.49■■□□□ 1.19
CTDNEP1-208ENST00000573600 AURKAIP1Q9NWT8 199 aaPredicted RBP22.49■■□□□ 1.19
CTDNEP1-208ENST00000573600 PSMB8P28062 276 aa22.48■■□□□ 1.19
CTDNEP1-208ENST00000573600 FAM209BQ5JX69 171 aa22.48■■□□□ 1.19
CTDNEP1-208ENST00000573600 OR8I2Q8N0Y5 310 aa22.48■■□□□ 1.19
CTDNEP1-208ENST00000573600 IGF2BP2-AS1Q96M15 143 aa22.48■■□□□ 1.19
CTDNEP1-208ENST00000573600 ATG101Q9BSB4 218 aa22.48■■□□□ 1.19
CTDNEP1-208ENST00000573600 S100A9P06702 114 aaKnown RBP22.48■■□□□ 1.19
CTDNEP1-208ENST00000573600 ATF4P18848 351 aaPredicted RBP22.48■■□□□ 1.19
CTDNEP1-208ENST00000573600 SFRP2Q96HF1 295 aa22.48■■□□□ 1.19
CTDNEP1-208ENST00000573600 METTL26Q96S19 204 aa22.48■■□□□ 1.19
CTDNEP1-208ENST00000573600 YAE1D1Q9NRH1 226 aa22.48■■□□□ 1.19
CTDNEP1-208ENST00000573600 FOLR2P14207 255 aa22.47■■□□□ 1.19
CTDNEP1-208ENST00000573600 GNG5P63218 68 aa22.47■■□□□ 1.19
CTDNEP1-208ENST00000573600 SLC35B1P78383 322 aa22.47■■□□□ 1.19
CTDNEP1-208ENST00000573600 OR4X2Q8NGF9 303 aa22.47■■□□□ 1.19
CTDNEP1-208ENST00000573600 GPR82Q96P67 336 aa22.47■■□□□ 1.19
CTDNEP1-208ENST00000573600 OR5B12Q96R08 314 aa22.47■■□□□ 1.19
CTDNEP1-208ENST00000573600 CLPSL1A2RUU4 121 aa22.46■■□□□ 1.19
CTDNEP1-208ENST00000573600 HNF1AP20823 631 aa22.46■■□□□ 1.19
CTDNEP1-208ENST00000573600 TMEM183BQ1AE95 376 aa22.46■■□□□ 1.19
CTDNEP1-208ENST00000573600 CMTM2Q8TAZ6 248 aa22.46■■□□□ 1.19
CTDNEP1-208ENST00000573600 URGCP-MRPS24S4R325 110 aa22.46■■□□□ 1.19
CTDNEP1-208ENST00000573600 UNC79Q9P2D8 2635 aa22.46■■□□□ 1.19
CTDNEP1-208ENST00000573600 IGHV3OR16-8A0A075B7F1 116 aa22.45■■□□□ 1.19
CTDNEP1-208ENST00000573600 NDUFA4O00483 81 aa22.45■■□□□ 1.19
CTDNEP1-208ENST00000573600 RAB5AP20339 215 aa22.45■■□□□ 1.19
CTDNEP1-208ENST00000573600 KLF12Q9Y4X4 402 aa22.45■■□□□ 1.19
CTDNEP1-208ENST00000573600 TEX15Q9BXT5 2789 aa22.45■■□□□ 1.19
CTDNEP1-208ENST00000573600 K7EN84 100 aa22.45■■□□□ 1.18
CTDNEP1-208ENST00000573600 BUB3O43684 328 aa22.45■■□□□ 1.18
CTDNEP1-208ENST00000573600 IGHV3-11P01762 117 aa22.45■■□□□ 1.18
CTDNEP1-208ENST00000573600 TCRAP04437 139 aa22.45■■□□□ 1.18
CTDNEP1-208ENST00000573600 UBE2G1P62253 170 aa22.45■■□□□ 1.18
CTDNEP1-208ENST00000573600 C1orf194Q5T5A4 169 aa22.45■■□□□ 1.18
CTDNEP1-208ENST00000573600 TEX38Q6PEX7 206 aa22.45■■□□□ 1.18
CTDNEP1-208ENST00000573600 SIGLEC15Q6ZMC9 328 aa22.45■■□□□ 1.18
CTDNEP1-208ENST00000573600 C17orf77Q96MU5 243 aa22.45■■□□□ 1.18
CTDNEP1-208ENST00000573600 CRYBA1P05813 215 aa22.44■■□□□ 1.18
CTDNEP1-208ENST00000573600 S100PP25815 95 aa22.44■■□□□ 1.18
CTDNEP1-208ENST00000573600 RPL15P61313 204 aaKnown RBP22.44■■□□□ 1.18
CTDNEP1-208ENST00000573600 PSG9Q00887 426 aa22.44■■□□□ 1.18
CTDNEP1-208ENST00000573600 Q8N2B8 174 aa22.44■■□□□ 1.18
CTDNEP1-208ENST00000573600 GALR1P47211 349 aa22.43■■□□□ 1.18
CTDNEP1-208ENST00000573600 EXOC3-AS1Q8N2X6 119 aa22.43■■□□□ 1.18
CTDNEP1-208ENST00000573600 LINC00479Q96M42 142 aa22.43■■□□□ 1.18
CTDNEP1-208ENST00000573600 TRBV12-3P01733 135 aa22.43■■□□□ 1.18
CTDNEP1-208ENST00000573600 LCNL1Q6ZST4 164 aa22.43■■□□□ 1.18
CTDNEP1-208ENST00000573600 OR10G8Q8NGN5 311 aa22.43■■□□□ 1.18
CTDNEP1-208ENST00000573600 FMC1Q96HJ9 113 aa22.43■■□□□ 1.18
CTDNEP1-208ENST00000573600 AAMDCQ9H7C9 122 aa22.43■■□□□ 1.18
CTDNEP1-208ENST00000573600 RPH3ALQ9UNE2 315 aa22.43■■□□□ 1.18
CTDNEP1-208ENST00000573600 U3KQE9 123 aa22.43■■□□□ 1.18
CTDNEP1-208ENST00000573600 CCDC168Q8NDH2 2452 aa22.42■■□□□ 1.18
CTDNEP1-208ENST00000573600 ZNF253O75346 499 aa22.42■■□□□ 1.18
CTDNEP1-208ENST00000573600 GCGP01275 180 aa22.42■■□□□ 1.18
CTDNEP1-208ENST00000573600 IGLV2-8P01709 118 aa22.42■■□□□ 1.18
CTDNEP1-208ENST00000573600 SMIM12Q96EX1 92 aa22.42■■□□□ 1.18
CTDNEP1-208ENST00000573600 ISLRO14498 428 aa22.41■■□□□ 1.18
CTDNEP1-208ENST00000573600 GGCTO75223 188 aaKnown RBP22.41■■□□□ 1.18
CTDNEP1-208ENST00000573600 PFN1P07737 140 aaKnown RBP22.41■■□□□ 1.18
CTDNEP1-208ENST00000573600 ELANEP08246 267 aa22.41■■□□□ 1.18
CTDNEP1-208ENST00000573600 SCGB2A2Q13296 93 aa22.41■■□□□ 1.18
CTDNEP1-208ENST00000573600 FOXE3Q13461 319 aa22.41■■□□□ 1.18
CTDNEP1-208ENST00000573600 BAGE2Q86Y30 109 aa22.41■■□□□ 1.18
CTDNEP1-208ENST00000573600 IMMP2LQ96T52 175 aa22.41■■□□□ 1.18
CTDNEP1-208ENST00000573600 TRAV34A0A0B4J273 112 aa22.4■■□□□ 1.18
CTDNEP1-208ENST00000573600 SLC17A3O00476 420 aa22.4■■□□□ 1.18
CTDNEP1-208ENST00000573600 PEF1Q9UBV8 284 aaKnown RBP22.4■■□□□ 1.18
CTDNEP1-208ENST00000573600 TRBV24-1A0A075B6N3 115 aa22.4■■□□□ 1.18
CTDNEP1-208ENST00000573600 A0A087X0K7 114 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 204.6 ms