RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 IGHV1-46P01743 117 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 SLC50A1Q9BRV3 221 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 MLNRO43193 412 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 TOMM40O96008 361 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 SLAQ13239 276 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 LSM4Q9Y4Z0 139 aaKnown RBP15.8■□□□□ 0.12
SUDS3-204ENST00000543473 FAM231BA6NCW3 169 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 MMP23AO75900 390 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 CLEC19AQ6UXS0 136 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 DDB2Q92466 427 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 PYGO2Q9BRQ0 406 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 KIR2DL5BA0A0G2JN68 375 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 KIR2DL5BA0A0G2JPC4 375 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 KIR2DL5AQ8N109 375 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 IGLV3-1P01715 115 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 TRGV3P03979 118 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 CYSLTR1Q9Y271 337 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 DOPEY2Q9Y3R5 2298 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 CREBBPQ92793 2442 aa15.79■□□□□ 0.12
SUDS3-204ENST00000543473 SMAD7O15105 426 aaKnown RBP15.78■□□□□ 0.12
SUDS3-204ENST00000543473 CD24P25063 80 aa15.78■□□□□ 0.12
SUDS3-204ENST00000543473 ZC2HC1BQ5TFG8 222 aa15.78■□□□□ 0.12
SUDS3-204ENST00000543473 IGKV1D-17A0A075B6S4 117 aa15.78■□□□□ 0.12
SUDS3-204ENST00000543473 IGKV2-40A0A087WW87 121 aaPredicted RBP15.78■□□□□ 0.12
SUDS3-204ENST00000543473 IGKV2D-40P01614 121 aaPredicted RBP15.78■□□□□ 0.12
SUDS3-204ENST00000543473 KLF17Q5JT82 389 aaPredicted RBP15.78■□□□□ 0.12
SUDS3-204ENST00000543473 IFI27P40305 119 aaPredicted RBP15.77■□□□□ 0.12
SUDS3-204ENST00000543473 DNAL4O96015 105 aa15.77■□□□□ 0.12
SUDS3-204ENST00000543473 IGKV1-16P04430 117 aa15.77■□□□□ 0.12
SUDS3-204ENST00000543473 PSG3Q16557 428 aa15.77■□□□□ 0.11
SUDS3-204ENST00000543473 LYPD6Q86Y78 171 aa15.77■□□□□ 0.11
SUDS3-204ENST00000543473 MDS2Q8NDY4 140 aa15.77■□□□□ 0.11
SUDS3-204ENST00000543473 TMEM190Q8WZ59 177 aa15.77■□□□□ 0.11
SUDS3-204ENST00000543473 CKS1BP61024 79 aa15.77■□□□□ 0.11
SUDS3-204ENST00000543473 RPL15P61313 204 aaKnown RBP15.77■□□□□ 0.11
SUDS3-204ENST00000543473 AMN1Q8IY45 258 aa15.77■□□□□ 0.11
SUDS3-204ENST00000543473 ATP5J2P56134 94 aa15.76■□□□□ 0.11
SUDS3-204ENST00000543473 SUMO2P61956 95 aaKnown RBP15.76■□□□□ 0.11
SUDS3-204ENST00000543473 LAGE3Q14657 143 aa15.76■□□□□ 0.11
SUDS3-204ENST00000543473 GGTLC3B5MD39 225 aa15.76■□□□□ 0.11
SUDS3-204ENST00000543473 LY6DQ14210 128 aa15.76■□□□□ 0.11
SUDS3-204ENST00000543473 CD300EQ496F6 205 aaPredicted RBP15.76■□□□□ 0.11
SUDS3-204ENST00000543473 H0YJW9 148 aa15.76■□□□□ 0.11
SUDS3-204ENST00000543473 VDAC2P45880 294 aaPredicted RBP15.76■□□□□ 0.11
SUDS3-204ENST00000543473 MAJINQ3KP22 176 aa15.76■□□□□ 0.11
SUDS3-204ENST00000543473 LY6EQ16553 131 aa15.76■□□□□ 0.11
SUDS3-204ENST00000543473 GFRA4Q9GZZ7 299 aa15.76■□□□□ 0.11
SUDS3-204ENST00000543473 IGHV2-26A0A0B4J1V2 119 aa15.75■□□□□ 0.11
SUDS3-204ENST00000543473 ARMS2P0C7Q2 107 aa15.75■□□□□ 0.11
SUDS3-204ENST00000543473 H7C1H1 209 aa15.75■□□□□ 0.11
SUDS3-204ENST00000543473 RNASE4P34096 147 aaKnown RBP15.75■□□□□ 0.11
SUDS3-204ENST00000543473 SNRPD3P62318 126 aaKnown RBP15.75■□□□□ 0.11
SUDS3-204ENST00000543473 RCHY1Q96PM5 261 aa15.75■□□□□ 0.11
SUDS3-204ENST00000543473 TIMM23O14925 209 aa15.74■□□□□ 0.11
SUDS3-204ENST00000543473 Q86TA4 180 aa15.74■□□□□ 0.11
SUDS3-204ENST00000543473 C11orf52Q96A22 123 aa15.74■□□□□ 0.11
SUDS3-204ENST00000543473 PLXNA2O75051 1894 aa15.74■□□□□ 0.11
SUDS3-204ENST00000543473 LMO1P25800 156 aa15.74■□□□□ 0.11
SUDS3-204ENST00000543473 ADAMTSL5Q6ZMM2 481 aa15.74■□□□□ 0.11
SUDS3-204ENST00000543473 PSMB11A5LHX3 300 aa15.73■□□□□ 0.11
SUDS3-204ENST00000543473 TNFRSF14Q92956 283 aa15.73■□□□□ 0.11
SUDS3-204ENST00000543473 TMEM14BQ9NUH8 114 aa15.73■□□□□ 0.11
SUDS3-204ENST00000543473 UBE2L6O14933 153 aa15.73■□□□□ 0.11
SUDS3-204ENST00000543473 IGHV4-39P01824 125 aa15.73■□□□□ 0.11
SUDS3-204ENST00000543473 TMEM200BQ69YZ2 307 aa15.73■□□□□ 0.11
SUDS3-204ENST00000543473 CHAC1Q9BUX1 264 aa15.73■□□□□ 0.11
SUDS3-204ENST00000543473 TNFRSF18Q9Y5U5 241 aa15.73■□□□□ 0.11
SUDS3-204ENST00000543473 SMKR1H3BMG3 65 aa15.73■□□□□ 0.11
SUDS3-204ENST00000543473 SH2D1AO60880 128 aa15.73■□□□□ 0.11
SUDS3-204ENST00000543473 SMIM27A0A1W2PRY6 76 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 H3BRM9 83 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 IGHV3OR16-12A0A075B7B8 117 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 TRAV2A0A0B4J234 112 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 FAM231DQ6ZW35 169 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 DOCK10Q96BY6 2186 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 TRAV21A0A0B4J279 112 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 GAGE2BQ13066 116 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 GAGE2EQ4V326 116 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 TMEM158Q8WZ71 300 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 PLSCR4Q9NRQ2 329 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 GAGE2DQ9UEU5 116 aa15.72■□□□□ 0.11
SUDS3-204ENST00000543473 PAX1P15863 534 aa15.71■□□□□ 0.11
SUDS3-204ENST00000543473 PDLIM4P50479 330 aa15.71■□□□□ 0.11
SUDS3-204ENST00000543473 CT83Q5H943 113 aa15.71■□□□□ 0.11
SUDS3-204ENST00000543473 PLA2G2CQ5R387 149 aa15.71■□□□□ 0.11
SUDS3-204ENST00000543473 ABCA4P78363 2273 aa15.71■□□□□ 0.11
SUDS3-204ENST00000543473 Q8TAT8 98 aa15.71■□□□□ 0.11
SUDS3-204ENST00000543473 ZNF492Q9P255 531 aa15.71■□□□□ 0.11
SUDS3-204ENST00000543473 NPFFO15130 113 aa15.71■□□□□ 0.11
SUDS3-204ENST00000543473 CENPVQ7Z7K6 275 aaPredicted RBP15.71■□□□□ 0.11
SUDS3-204ENST00000543473 RNASE6Q93091 150 aaKnown RBP15.71■□□□□ 0.11
SUDS3-204ENST00000543473 IGHV3OR16-10A0A075B7F0 116 aa15.7■□□□□ 0.1
SUDS3-204ENST00000543473 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.7■□□□□ 0.1
SUDS3-204ENST00000543473 C9orf118A6NHY6 69 aa15.7■□□□□ 0.1
SUDS3-204ENST00000543473 K7EP13 123 aa15.7■□□□□ 0.1
SUDS3-204ENST00000543473 LYPD1Q8N2G4 141 aa15.7■□□□□ 0.1
SUDS3-204ENST00000543473 DLX4Q92988 240 aaPredicted RBP15.7■□□□□ 0.1
SUDS3-204ENST00000543473 CADP27708 2225 aa15.7■□□□□ 0.1
SUDS3-204ENST00000543473 IGHV1-24A0A0C4DH33 117 aa15.7■□□□□ 0.1
SUDS3-204ENST00000543473 Q6ZVH6 145 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms