RNA–Protein interactions for RNA: ENST00000495428.5

CMC1-211, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 608 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-211ENST00000495428 OSTCQ9NRP0 149 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 UBAP1Q9NZ09 502 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 MRPL27Q9P0M9 148 aaKnown RBP0.04□□□□□ -2.4
CMC1-211ENST00000495428 V9GYY5 206 aaPredicted RBP0.04□□□□□ -2.4
CMC1-211ENST00000495428 PKHD1L1Q86WI1 4243 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 CSMD3Q7Z407 3707 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 NUP155O75694 1391 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 SNAPC4Q5SXM2 1469 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 A0A0D9SG42 100 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 OR4C46A6NHA9 309 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 KLF7O75840 302 aaPredicted RBP0.03□□□□□ -2.4
CMC1-211ENST00000495428 PROSCO94903 275 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 TNNC2P02585 160 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 CALB1P05937 261 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 HIST3H3Q16695 136 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 BRMS1LQ5PSV4 323 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 GKN2Q86XP6 184 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 OR52E6Q96RD3 313 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 TLNRD1Q9H1K6 362 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 SLC35A3Q9Y2D2 325 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 TJP1Q07157 1748 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 KNTC1P50748 2209 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 ROBO3Q96MS0 1386 aa0.03□□□□□ -2.4
CMC1-211ENST00000495428 DOCK5Q9H7D0 1870 aa0.03□□□□□ -2.41
CMC1-211ENST00000495428 LRP6O75581 1613 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 DYNC2H1Q8NCM8 4307 aaKnown RBP0.02□□□□□ -2.41
CMC1-211ENST00000495428 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.02□□□□□ -2.41
CMC1-211ENST00000495428 TRAV26-2A0A0B4J265 109 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 TRBV6-4A0A1B0GX49 114 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 CCL16O15467 120 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 CHP2O43745 196 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 SMIM10L2AP0DMW4 78 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 SMIM10L2BP0DMW5 78 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 CD79AP11912 226 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 PSME3P61289 254 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 ESRGQ1W209 222 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 ACOT6Q3I5F7 207 aaPredicted RBP0.02□□□□□ -2.41
CMC1-211ENST00000495428 LINC00322Q6ZN03 302 aaPredicted RBP0.02□□□□□ -2.41
CMC1-211ENST00000495428 OR8D4Q8NGM9 314 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 WFDC5Q8TCV5 224 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 ADAT3Q96EY9 351 aaPredicted RBP0.02□□□□□ -2.41
CMC1-211ENST00000495428 C20orf27Q9GZN8 174 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 DCSTAMPQ9H295 470 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 CHCHD2Q9Y6H1 151 aaPredicted RBP0.02□□□□□ -2.41
CMC1-211ENST00000495428 NEO1Q92859 1461 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 ZMYM4Q5VZL5 1548 aa0.02□□□□□ -2.41
CMC1-211ENST00000495428 ZNF106Q9H2Y7 1883 aaKnown RBP0.01□□□□□ -2.41
CMC1-211ENST00000495428 ALPK3Q96L96 1907 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 TNXBP22105 4242 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 URB1O60287 2271 aaKnown RBP0.01□□□□□ -2.41
CMC1-211ENST00000495428 FAM236DA0A1B0GTK5 79 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 CRYZL1O95825 349 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 TPM3P06753 285 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 OR4E1P0C645 316 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 FAM236CP0DP71 79 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 SPOPLQ6IQ16 392 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 KRTAP26-1Q6PEX3 210 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 LINC00301Q8NCQ3 95 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 NKIRAS1Q9NYS0 192 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 PLAC8Q9NZF1 115 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 GUCA1BQ9UMX6 200 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 MAP3K5Q99683 1374 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 SHANK2Q9UPX8 1470 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 LPAP08519 4548 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 EHBP1L1Q8N3D4 1523 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 ECM29Q5VYK3 1845 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 SBF1O95248 1867 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 DNAH9Q9NYC9 4486 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 SACSQ9NZJ4 4579 aa0.01□□□□□ -2.41
CMC1-211ENST00000495428 FAT1Q14517 4588 aa0□□□□□ -2.41
CMC1-211ENST00000495428 OR2T8A6NH00 312 aa0□□□□□ -2.41
CMC1-211ENST00000495428 IFNA5P01569 189 aa0□□□□□ -2.41
CMC1-211ENST00000495428 S100A4P26447 101 aaKnown RBP0□□□□□ -2.41
CMC1-211ENST00000495428 SMARCA2P51531 1590 aa0□□□□□ -2.41
CMC1-211ENST00000495428 FAM74A1Q5RGS3 127 aa0□□□□□ -2.41
CMC1-211ENST00000495428 TRAPPC6BQ86SZ2 158 aa0□□□□□ -2.41
CMC1-211ENST00000495428 Q8IYB0 196 aa0□□□□□ -2.41
CMC1-211ENST00000495428 C12orf45Q8N5I9 185 aaPredicted RBP0□□□□□ -2.41
CMC1-211ENST00000495428 OR11H6Q8NGC7 330 aa0□□□□□ -2.41
CMC1-211ENST00000495428 C4orf3Q8WVX3 66 aa0□□□□□ -2.41
CMC1-211ENST00000495428 ITFG2Q969R8 447 aa0□□□□□ -2.41
CMC1-211ENST00000495428 LRRC7Q96NW7 1537 aa0□□□□□ -2.41
CMC1-211ENST00000495428 SPRR2FQ96RM1 72 aa0□□□□□ -2.41
CMC1-211ENST00000495428 MRPS26Q9BYN8 205 aaKnown RBP0□□□□□ -2.41
CMC1-211ENST00000495428 TRIM4Q9C037 500 aa0□□□□□ -2.41
CMC1-211ENST00000495428 LINC00846Q9NV44 126 aa0□□□□□ -2.41
CMC1-211ENST00000495428 NHP2Q9NX24 153 aaKnown RBP0□□□□□ -2.41
CMC1-211ENST00000495428 UTP11Q9Y3A2 253 aaKnown RBP0□□□□□ -2.41
CMC1-211ENST00000495428 VPS13BQ7Z7G8 4022 aa-0□□□□□ -2.41
CMC1-211ENST00000495428 KIAA1549Q9HCM3 1950 aa-0.01□□□□□ -2.41
CMC1-211ENST00000495428 IQSEC2Q5JU85 1478 aa-0.01□□□□□ -2.41
CMC1-211ENST00000495428 ARAP1Q96P48 1450 aa-0.01□□□□□ -2.41
CMC1-211ENST00000495428 MYO3BQ8WXR4 1341 aa-0.01□□□□□ -2.41
CMC1-211ENST00000495428 TLCD2A6NGC4 264 aa-0.01□□□□□ -2.41
CMC1-211ENST00000495428 M0R378 163 aa-0.01□□□□□ -2.41
CMC1-211ENST00000495428 ZNF682O95780 498 aa-0.01□□□□□ -2.41
CMC1-211ENST00000495428 SMR3BP02814 79 aaPredicted RBP-0.01□□□□□ -2.41
CMC1-211ENST00000495428 NKX2-5P52952 324 aaPredicted RBP-0.01□□□□□ -2.41
CMC1-211ENST00000495428 TPM4P67936 248 aa-0.01□□□□□ -2.41
CMC1-211ENST00000495428 TSNQ15631 228 aaKnown RBP-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms