RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 NDFIP1Q9BT67 221 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 EFCAB1Q9HAE3 211 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 XAGE1AQ9HD64 81 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 HSPB8Q9UJY1 196 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 PTPRQQ9UMZ3 2332 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 TRAPPC1Q9Y5R8 145 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 MYO16Q9Y6X6 1858 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 PLXND1Q9Y4D7 1925 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 FLNCQ14315 2725 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZFHX3Q15911 3703 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 CABIN1Q9Y6J0 2220 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 ATG2BQ96BY7 2078 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 DENND4CQ5VZ89 1909 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 A0A096LPI6 279 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 C19orf84I3L1E1 186 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 UBE2L6O14933 153 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF324O75467 553 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 NRASP01111 189 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 HRASP01112 189 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 KRASP01116 189 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 C1QAP02745 245 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 SCTP09683 121 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 UBBP0CG47 229 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 IGHV3-30-3P0DP02 117 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 BCL2P10415 239 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 RPS3P23396 243 aaKnown RBP eCLIP2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 CASP1P29466 404 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 SRIP30626 198 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 RPL27AP46776 148 aaKnown RBP2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST1H4AP62805 103 aaKnown RBP2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 MRPL51Q4U2R6 128 aaKnown RBP2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 AMTNQ6UX39 209 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF101Q8IZC7 436 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZFAND2AQ8N6M9 145 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 SPANXA2-OT1Q8N9U9 137 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 OR11G2Q8NGC1 345 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 OR4K15Q8NH41 348 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 VPS25Q9BRG1 176 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 TM2D3Q9BRN9 247 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 PLA2G12AQ9BZM1 189 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 TUBA4BQ9H853 241 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 MED31Q9Y3C7 131 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 LRRK2Q5S007 2527 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
HMGB1P15-201ENST00000453854 NF1P21359 2839 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 NOTCH2Q04721 2471 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 CSMD1Q96PZ7 3565 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 CACNA1EQ15878 2313 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 SETD2Q9BYW2 2564 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 ASXL3Q9C0F0 2248 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 SPG11Q96JI7 2443 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 TRBV24-1A0A075B6N3 115 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 A0A087WUU8 490 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 TRDV1A0A1B0GX56 115 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 ARRDC5A6NEK1 342 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 LINC00587B1AMM8 73 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 CLDN25C9JDP6 229 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 F8W036 122 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 LHBP01229 141 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 IGKV1-5P01602 117 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 LINC00869P0C866 280 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 CGB3P0DN86 165 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 CGB7P0DN87 165 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 CD28P10747 220 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 RPL7P18124 248 aaKnown RBP2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 NPY1RP25929 384 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 CD200P41217 278 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 GABRA2P47869 451 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 TAS2R20P59543 309 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 DEFA6Q01524 100 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 OR8G1Q15617 311 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 LGALS9BQ3B8N2 356 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 LGALS9CQ6DKI2 356 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 Q6P435 159 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 LCA10Q71F78 164 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 SSX8Q7RTT4 187 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 MIR7-3HGQ8N6C7 128 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 Q8N9L7 120 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZFP62Q8NB50 900 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 DEFB124Q8NES8 71 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 FNDC9Q8TBE3 224 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 H1FXQ92522 213 aaKnown RBP2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST1H2BAQ96A08 127 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF285Q96NJ3 590 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 MND1Q9BWT6 205 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 TSSK6Q9BXA6 273 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 GABARAPL1Q9H0R8 117 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF586Q9NXT0 402 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF230Q9UIE0 474 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 LINC00588Q9Y4M8 146 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 COL27A1Q8IZC6 1860 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 NUP210Q8TEM1 1887 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 ADGRG4Q8IZF6 3080 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 TLN1Q9Y490 2541 aaKnown RBP2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 PI4KAP42356 2102 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 CRYBG3Q68DQ2 2970 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 SPTBN1Q01082 2364 aaKnown RBP2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 CACNA1DQ01668 2161 aa2.36□□□□□ -2.03
HMGB1P15-201ENST00000453854 URB1O60287 2271 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms