RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 ZNRD1Q9P1U0 126 aa13.65□□□□□ -0.22
SYNGAP1-202ENST00000418600 RTBDNQ9BSG5 229 aaPredicted RBP13.65□□□□□ -0.23
SYNGAP1-202ENST00000418600 SPTBN2O15020 2390 aa13.64□□□□□ -0.23
SYNGAP1-202ENST00000418600 A0A0A6YYD4 124 aa13.64□□□□□ -0.23
SYNGAP1-202ENST00000418600 TMEM50AO95807 157 aa13.64□□□□□ -0.23
SYNGAP1-202ENST00000418600 SRRM4A7MD48 611 aaKnown RBP13.64□□□□□ -0.23
SYNGAP1-202ENST00000418600 ARTNQ5T4W7 220 aa13.64□□□□□ -0.23
SYNGAP1-202ENST00000418600 IGHV4-31P0DP07 118 aa13.64□□□□□ -0.23
SYNGAP1-202ENST00000418600 CDK2AP2O75956 126 aa13.64□□□□□ -0.23
SYNGAP1-202ENST00000418600 KIAA1644Q3SXP7 199 aa13.64□□□□□ -0.23
SYNGAP1-202ENST00000418600 MUC21A0A0G2JKD1 596 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 MUC21A0A140T8X8 626 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 LGALS1P09382 135 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 MRPL27Q9P0M9 148 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 NOTCH4Q99466 2003 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 SRSF4Q08170 494 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 LINC00477Q96M19 166 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 LINC00587B1AMM8 73 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 CGB7P0DN87 165 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 SMAD5-AS1Q9Y6J3 95 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 MYCNOSP40205 109 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 CFHR3Q02985 330 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 ZNF833PQ6ZTB9 187 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 TRGV9Q99603 122 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 SLC25A39Q9BZJ4 359 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 RIF1Q5UIP0 2472 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 RNF182Q8N6D2 247 aa13.63□□□□□ -0.23
SYNGAP1-202ENST00000418600 TRBV6-6A0A0A6YYG2 114 aa13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 IZUMO1RA6ND01 250 aa13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 SRSF1Q07955 248 aaKnown RBP eCLIP13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 C18orf15Q96N68 181 aa13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 NDUFA4O00483 81 aa13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 LURAP1LQ8IV03 231 aa13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 PUSL1Q8N0Z8 303 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 RCC1LQ96I51 464 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 PPBPP02775 128 aa13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 GNG5P63218 68 aa13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 DEFB136Q30KP8 78 aa13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 NCOR1P1Q9H4R4 102 aa13.62□□□□□ -0.23
SYNGAP1-202ENST00000418600 ORMDL2Q53FV1 153 aa13.61□□□□□ -0.23
SYNGAP1-202ENST00000418600 MYLKQ15746 1914 aa13.61□□□□□ -0.23
SYNGAP1-202ENST00000418600 IGKV2-40A0A087WW87 121 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-202ENST00000418600 ITGB1BP1O14713 200 aa13.61□□□□□ -0.23
SYNGAP1-202ENST00000418600 IGKV2D-40P01614 121 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-202ENST00000418600 TMEM95Q3KNT9 176 aa13.61□□□□□ -0.23
SYNGAP1-202ENST00000418600 PLXND1Q9Y4D7 1925 aa13.61□□□□□ -0.23
SYNGAP1-202ENST00000418600 CYSLTR1Q9Y271 337 aa13.61□□□□□ -0.23
SYNGAP1-202ENST00000418600 TRAV3A0A0B4J244 114 aa13.61□□□□□ -0.23
SYNGAP1-202ENST00000418600 TEX48A0A1B0GUV7 120 aa13.6□□□□□ -0.23
SYNGAP1-202ENST00000418600 SEM1Q6ZVN7 128 aa13.6□□□□□ -0.23
SYNGAP1-202ENST00000418600 SCRT1Q9BWW7 348 aa13.6□□□□□ -0.23
SYNGAP1-202ENST00000418600 NDUFB8O95169 186 aa13.6□□□□□ -0.23
SYNGAP1-202ENST00000418600 LINC00311Q8N616 119 aa13.6□□□□□ -0.23
SYNGAP1-202ENST00000418600 OR2K2Q8NGT1 345 aa13.6□□□□□ -0.23
SYNGAP1-202ENST00000418600 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-202ENST00000418600 HOXD3P31249 432 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-202ENST00000418600 C17orf58Q2M2W7 97 aa13.59□□□□□ -0.23
SYNGAP1-202ENST00000418600 FOXA3P55318 350 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-202ENST00000418600 PSG8Q9UQ74 426 aa13.59□□□□□ -0.23
SYNGAP1-202ENST00000418600 PYYP10082 97 aa13.59□□□□□ -0.23
SYNGAP1-202ENST00000418600 F2Z2F3 143 aa13.59□□□□□ -0.23
SYNGAP1-202ENST00000418600 MORN3Q6PF18 240 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-202ENST00000418600 FHITP49789 147 aa13.58□□□□□ -0.23
SYNGAP1-202ENST00000418600 NPIPB5A8MRT5 1133 aa13.58□□□□□ -0.24
SYNGAP1-202ENST00000418600 CBLN1P23435 193 aa13.58□□□□□ -0.24
SYNGAP1-202ENST00000418600 PMS2P5A8MQ11 134 aa13.58□□□□□ -0.24
SYNGAP1-202ENST00000418600 HAPLN4Q86UW8 402 aa13.58□□□□□ -0.24
SYNGAP1-202ENST00000418600 LINC00473A8K010 186 aa13.58□□□□□ -0.24
SYNGAP1-202ENST00000418600 WDR86Q86TI4 376 aa13.58□□□□□ -0.24
SYNGAP1-202ENST00000418600 NDUFA11Q86Y39 141 aa13.58□□□□□ -0.24
SYNGAP1-202ENST00000418600 ZNF98A6NK75 572 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 IGKV1-16P04430 117 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 PLNP26678 52 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 ZNF138P52744 262 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 PAX9P55771 341 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 NAPSAO96009 420 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 CD28P10747 220 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 LINC01559Q495D7 138 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 KNCNA6PVL3 124 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 DKK1O94907 266 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 DDTP30046 118 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 S100A7L2Q5SY68 101 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 PIFOQ8TCI5 191 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 CTSZQ9UBR2 303 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 IGKV3D-20A0A0C4DH25 116 aa13.57□□□□□ -0.24
SYNGAP1-202ENST00000418600 J3QRE1 110 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 SLURP1P55000 103 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 NDUFA3O95167 84 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 CKS1BP61024 79 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 GPR179Q6PRD1 2367 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 SCO2A0A1W2PP80 73 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 SEPSECSQ9HD40 501 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 NTF4P34130 210 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 SLC25A2Q9BXI2 301 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 H2BFSP57053 126 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 FAM90A2PQ658T7 463 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 EPDR1Q9UM22 224 aa13.56□□□□□ -0.24
SYNGAP1-202ENST00000418600 A0A1B0GWB2 263 aa13.55□□□□□ -0.24
SYNGAP1-202ENST00000418600 PSG3Q16557 428 aa13.55□□□□□ -0.24
SYNGAP1-202ENST00000418600 PAX2Q02962 417 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms