RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 MOGAT3Q86VF5 341 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 ZNF747Q9BV97 191 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 TSSC4Q9Y5U2 329 aaPredicted RBP13.74□□□□□ -0.21
PTPRA-205ENST00000399903 NEU4Q8WWR8 484 aaPredicted RBP13.73□□□□□ -0.21
PTPRA-205ENST00000399903 FXYD5Q96DB9 178 aa13.73□□□□□ -0.21
PTPRA-205ENST00000399903 C1RLQ9NZP8 487 aa13.73□□□□□ -0.21
PTPRA-205ENST00000399903 SPRY3O43610 288 aa13.73□□□□□ -0.21
PTPRA-205ENST00000399903 C19orf24Q9BVV8 132 aa13.73□□□□□ -0.21
PTPRA-205ENST00000399903 A0A1W2PPM0 123 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 E7EUB6 86 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 UPK2O00526 184 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 MGST3O14880 152 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 CFHR2P36980 270 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 MSMPQ1L6U9 139 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 SAMD5Q5TGI4 173 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 C16orf54Q6UWD8 224 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 GOLT1AQ6ZVE7 132 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 OR1L4Q8NGR5 311 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 HARBI1Q96MB7 349 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 SIGMAR1Q99720 223 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 FAM87AP0C7U9 286 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 ZADH2Q8N4Q0 377 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 MRPL36Q9P0J6 103 aaKnown RBP13.72□□□□□ -0.21
PTPRA-205ENST00000399903 PSG3Q16557 428 aa13.72□□□□□ -0.21
PTPRA-205ENST00000399903 M0R1B8 84 aa13.71□□□□□ -0.21
PTPRA-205ENST00000399903 C22orf34Q6ZV56 151 aa13.71□□□□□ -0.21
PTPRA-205ENST00000399903 FAM90A1Q86YD7 464 aa13.71□□□□□ -0.21
PTPRA-205ENST00000399903 DDB2Q92466 427 aa13.71□□□□□ -0.21
PTPRA-205ENST00000399903 ZNF71Q9NQZ8 489 aaPredicted RBP13.71□□□□□ -0.21
PTPRA-205ENST00000399903 TACC2O95359 2948 aa13.71□□□□□ -0.21
PTPRA-205ENST00000399903 PTPRBP23467 1997 aa13.71□□□□□ -0.21
PTPRA-205ENST00000399903 PPIAL4EA0A075B759 164 aa13.71□□□□□ -0.21
PTPRA-205ENST00000399903 PPIAL4FP0DN26 164 aa13.71□□□□□ -0.21
PTPRA-205ENST00000399903 FCGR2BP31994 310 aaPredicted RBP13.71□□□□□ -0.21
PTPRA-205ENST00000399903 ITLN1Q8WWA0 313 aa13.71□□□□□ -0.21
PTPRA-205ENST00000399903 PROCRQ9UNN8 238 aa13.71□□□□□ -0.21
PTPRA-205ENST00000399903 SPTAN1Q13813 2472 aaKnown RBP13.71□□□□□ -0.22
PTPRA-205ENST00000399903 PRR33A8MZF0 331 aa13.7□□□□□ -0.22
PTPRA-205ENST00000399903 FNDC10F2Z333 226 aa13.7□□□□□ -0.22
PTPRA-205ENST00000399903 EXOC3-AS1Q8N2X6 119 aa13.7□□□□□ -0.22
PTPRA-205ENST00000399903 ADAMTSL5Q6ZMM2 481 aa13.7□□□□□ -0.22
PTPRA-205ENST00000399903 PRR7Q8TB68 274 aa13.7□□□□□ -0.22
PTPRA-205ENST00000399903 IGHV1-18A0A0C4DH31 117 aa13.7□□□□□ -0.22
PTPRA-205ENST00000399903 DLL1O00548 723 aa13.7□□□□□ -0.22
PTPRA-205ENST00000399903 FCER1GP30273 86 aa13.7□□□□□ -0.22
PTPRA-205ENST00000399903 HSD52Q0P140 79 aa13.7□□□□□ -0.22
PTPRA-205ENST00000399903 INO80CQ6PI98 192 aaPredicted RBP13.7□□□□□ -0.22
PTPRA-205ENST00000399903 Q9H3A6 140 aa13.69□□□□□ -0.22
PTPRA-205ENST00000399903 WNK2Q9Y3S1 2297 aa13.69□□□□□ -0.22
PTPRA-205ENST00000399903 F2RL2O00254 374 aa13.69□□□□□ -0.22
PTPRA-205ENST00000399903 SMAD7O15105 426 aaKnown RBP13.69□□□□□ -0.22
PTPRA-205ENST00000399903 A0A1B0GUT8 65 aa13.69□□□□□ -0.22
PTPRA-205ENST00000399903 C2orf83Q53S99 150 aa13.69□□□□□ -0.22
PTPRA-205ENST00000399903 NEGR1Q7Z3B1 354 aa13.69□□□□□ -0.22
PTPRA-205ENST00000399903 NDFIP1Q9BT67 221 aa13.69□□□□□ -0.22
PTPRA-205ENST00000399903 C7orf69Q9H7B7 122 aa13.69□□□□□ -0.22
PTPRA-205ENST00000399903 NHP2Q9NX24 153 aaKnown RBP13.69□□□□□ -0.22
PTPRA-205ENST00000399903 LRBAP50851 2863 aa13.68□□□□□ -0.22
PTPRA-205ENST00000399903 SMIM13P0DJ93 91 aa13.68□□□□□ -0.22
PTPRA-205ENST00000399903 FAM27E3Q08E93 113 aa13.68□□□□□ -0.22
PTPRA-205ENST00000399903 SPTBN1Q01082 2364 aaKnown RBP13.68□□□□□ -0.22
PTPRA-205ENST00000399903 IGKV3-15P01624 115 aa13.68□□□□□ -0.22
PTPRA-205ENST00000399903 BMI1P35226 326 aa13.68□□□□□ -0.22
PTPRA-205ENST00000399903 SH2D6Q7Z4S9 175 aa13.68□□□□□ -0.22
PTPRA-205ENST00000399903 AKAP6Q13023 2319 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 SMKR1H3BMG3 65 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 ZNF474Q6S9Z5 364 aaPredicted RBP13.67□□□□□ -0.22
PTPRA-205ENST00000399903 IGFL2Q6UWQ7 119 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 BCL6BQ8N143 479 aaPredicted RBP13.67□□□□□ -0.22
PTPRA-205ENST00000399903 ZNF414Q96IQ9 312 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 COL12A1Q99715 3063 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 A0A1B0GV72 72 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 D6R8Y8 96 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 CT45A6P0DMU7 189 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 CT45A5P0DMU8 189 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 CT45A7P0DMV0 189 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 OR5A1Q8NGJ0 315 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 ENSAO43768 121 aaKnown RBP13.67□□□□□ -0.22
PTPRA-205ENST00000399903 LYZP61626 148 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 GCSAMQ8N6F7 178 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 OR1L8Q8NGR8 309 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 CCL13Q99616 98 aa13.67□□□□□ -0.22
PTPRA-205ENST00000399903 TCRBV4S1A1TA0A5B7 111 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 TCRAP04437 139 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 FGF6P10767 208 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 WFDC2Q14508 124 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 FAM215AQ9Y5M1 114 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 IGHV3-72A0A0B4J1Y9 119 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 FXYD2P54710 66 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 C17orf58Q2M2W7 97 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 ETDBQ3ZM63 59 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 RUSC1-AS1Q66K80 236 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 AMTNQ6UX39 209 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 ZCCHC24Q8N2G6 241 aaKnown RBP13.66□□□□□ -0.22
PTPRA-205ENST00000399903 MRPL20Q9BYC9 149 aaKnown RBP13.66□□□□□ -0.22
PTPRA-205ENST00000399903 DKK2Q9UBU2 259 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 INSIG2Q9Y5U4 225 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 PSMB11A5LHX3 300 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms