RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 NPIPB5A8MRT5 1133 aa10.52□□□□□ -0.73
PTPRN2-202ENST00000389416 HIGD1CA8MV81 97 aa10.52□□□□□ -0.73
PTPRN2-202ENST00000389416 IGKV2D-40P01614 121 aaPredicted RBP10.52□□□□□ -0.73
PTPRN2-202ENST00000389416 FAM120AOSQ5T036 256 aa10.52□□□□□ -0.73
PTPRN2-202ENST00000389416 MAP1LC3AQ9H492 121 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 M0R3E3 92 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 DAZAP2Q15038 168 aaPredicted RBP10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 SAMD13Q5VXD3 122 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 DERL1Q9BUN8 251 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 OR4C46A6NHA9 309 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 C19orf84I3L1E1 186 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 CA1P00915 261 aaPredicted RBP10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 CD7P09564 240 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 FER1L6-AS1Q8NA97 138 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 GPR61Q9BZJ8 451 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 PEF1Q9UBV8 284 aaKnown RBP10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 NPIPB6E9PJ23 425 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 RHPN1-AS1Q9BWJ2 59 aa10.51□□□□□ -0.73
PTPRN2-202ENST00000389416 TRAV8-1A0A0A6YYK1 113 aa10.5□□□□□ -0.73
PTPRN2-202ENST00000389416 AMMECR1LQ6DCA0 310 aa10.5□□□□□ -0.73
PTPRN2-202ENST00000389416 TMEM136Q6ZRR5 245 aa10.5□□□□□ -0.73
PTPRN2-202ENST00000389416 SRSF8Q9BRL6 282 aaKnown RBP10.5□□□□□ -0.73
PTPRN2-202ENST00000389416 PAM16Q9Y3D7 125 aa10.5□□□□□ -0.73
PTPRN2-202ENST00000389416 J3QLI3 93 aa10.5□□□□□ -0.73
PTPRN2-202ENST00000389416 FAM110DQ8TAY7 271 aaPredicted RBP10.5□□□□□ -0.73
PTPRN2-202ENST00000389416 ASCL2Q99929 193 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 TRAV1-1A0A0B4J248 108 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 NUDT3O95989 172 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 VAMP3Q15836 100 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 DEFB112Q30KQ8 113 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 C1orf122Q6ZSJ8 110 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 LINC00518Q8N0U6 118 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 TBX15Q96SF7 602 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 ZFP30Q9Y2G7 519 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 FAM223BA6NKX1 122 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 DIRC3C9JPN6 131 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 LEPROTL1O95214 131 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 TMEM249Q2WGJ8 235 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 FAM223AQ8IWN6 122 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 C10orf105Q8TEF2 133 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 A0A087X0M5 115 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 A0A1B0GX30 115 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 IGHV4-59P01825 116 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 SCGB1D4Q6XE38 83 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 DTX2Q86UW9 622 aa10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 PRRC2AP48634 2157 aaKnown RBP10.49□□□□□ -0.73
PTPRN2-202ENST00000389416 HTN3P15516 51 aa10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 HOXB4P17483 251 aaPredicted RBP10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 Q8TAT8 98 aa10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 HOXA3O43365 443 aaPredicted RBP10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 DUSP14O95147 198 aaKnown RBP10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 TOMM40O96008 361 aa10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 CD5P06127 495 aa10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 CDC42EP3Q9UKI2 254 aa10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 FCN3O75636 299 aa10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 CHD3Q12873 2000 aaKnown RBP10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 IGHV4-38-2P0DP08 117 aa10.48□□□□□ -0.73
PTPRN2-202ENST00000389416 LAMA3Q16787 3333 aa10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 FBLL1A6NHQ2 334 aaKnown RBP10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 TCRAP04437 139 aa10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 Q1RN00 199 aa10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 SPOCK3Q9BQ16 436 aa10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 DAZ1Q9NQZ3 744 aaKnown RBP10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 TRGV2A0A075B6R0 118 aa10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 TRAV21A0A0B4J279 112 aa10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 REC114Q7Z4M0 266 aa10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 ZNF502Q8TBZ5 544 aa10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 KIR2DL4Q99706 377 aa10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 LRP4O75096 1905 aa10.47□□□□□ -0.73
PTPRN2-202ENST00000389416 IGKV3OR2-268A0A0C4DH90 116 aa10.46□□□□□ -0.73
PTPRN2-202ENST00000389416 TCF23Q7RTU1 214 aa10.46□□□□□ -0.73
PTPRN2-202ENST00000389416 SSBP4Q9BWG4 385 aaPredicted RBP10.46□□□□□ -0.73
PTPRN2-202ENST00000389416 FNDC10F2Z333 226 aa10.46□□□□□ -0.73
PTPRN2-202ENST00000389416 OVOL1O14753 267 aa10.46□□□□□ -0.73
PTPRN2-202ENST00000389416 HERVK_113P61574 105 aa10.46□□□□□ -0.73
PTPRN2-202ENST00000389416 AP5S1Q9NUS5 200 aa10.46□□□□□ -0.73
PTPRN2-202ENST00000389416 TRBV9A0A0B4J1U6 114 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 PAX1P15863 534 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 ZFP36P26651 326 aaKnown RBP10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 PRELID3AQ96N28 172 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 OSTCQ9NRP0 149 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 C5orf42Q9H799 3197 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 PLXNB1O43157 2135 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 GZMBP10144 247 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 POU2AF1Q16633 256 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 TMEM97Q5BJF2 176 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 C3orf56Q8N813 242 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 OR11H6Q8NGC7 330 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 LINC00479Q96M42 142 aa10.46□□□□□ -0.74
PTPRN2-202ENST00000389416 UBE2L6O14933 153 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 C1QL4Q86Z23 238 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 A0A087WWC5 75 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 LCN12Q6JVE5 192 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 C9orf139Q6ZV77 190 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 JKAMPQ9P055 326 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 CENPVL3A0A0U1RRI6 287 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 M0R143 59 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 OR4C5Q8NGB2 326 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 C2CD3Q4AC94 2353 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 ACTL10Q5JWF8 245 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms