RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 ZFHX3Q15911 3703 aa12.88□□□□□ -0.35
TVP23B-201ENST00000307767 ATP6V0E1O15342 81 aa12.88□□□□□ -0.35
TVP23B-201ENST00000307767 GZMBP10144 247 aa12.88□□□□□ -0.35
TVP23B-201ENST00000307767 BRS3P32247 399 aa12.88□□□□□ -0.35
TVP23B-201ENST00000307767 PRR27Q6MZM9 219 aa12.88□□□□□ -0.35
TVP23B-201ENST00000307767 BPIFA4PQ86YQ2 179 aa12.88□□□□□ -0.35
TVP23B-201ENST00000307767 NUP35Q8NFH5 326 aa12.88□□□□□ -0.35
TVP23B-201ENST00000307767 FAM110DQ8TAY7 271 aaPredicted RBP12.88□□□□□ -0.35
TVP23B-201ENST00000307767 IGHV3OR16-10A0A075B7F0 116 aa12.87□□□□□ -0.35
TVP23B-201ENST00000307767 Q56UQ5 140 aa12.87□□□□□ -0.35
TVP23B-201ENST00000307767 MRPL54Q6P161 138 aaKnown RBP12.87□□□□□ -0.35
TVP23B-201ENST00000307767 CCL19Q99731 98 aa12.87□□□□□ -0.35
TVP23B-201ENST00000307767 FBXL7Q9UJT9 491 aa12.87□□□□□ -0.35
TVP23B-201ENST00000307767 OR2T8A6NH00 312 aa12.87□□□□□ -0.35
TVP23B-201ENST00000307767 GOSR1O95249 250 aa12.87□□□□□ -0.35
TVP23B-201ENST00000307767 AMY1AP04745 511 aa12.87□□□□□ -0.35
TVP23B-201ENST00000307767 PRB4P10163 310 aaPredicted RBP12.87□□□□□ -0.35
TVP23B-201ENST00000307767 Q86TA4 180 aa12.87□□□□□ -0.35
TVP23B-201ENST00000307767 IGHV4-30-2A0A087WSY4 118 aa12.86□□□□□ -0.35
TVP23B-201ENST00000307767 G3V318 75 aa12.86□□□□□ -0.35
TVP23B-201ENST00000307767 C5orf56Q8N8D9 126 aa12.86□□□□□ -0.35
TVP23B-201ENST00000307767 SOX21Q9Y651 276 aaPredicted RBP12.86□□□□□ -0.35
TVP23B-201ENST00000307767 ESDP10768 282 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 GOLT1AQ6ZVE7 132 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 ZNF502Q8TBZ5 544 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 TSKUQ8WUA8 353 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 NEU1Q99519 415 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 PIMREGQ9BSJ6 248 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 THYN1Q9P016 225 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 ZNF492Q9P255 531 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 TRBV6-1A0A0K0K1D8 114 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 BMPR1BO00238 502 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 CRISP2P16562 243 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 Q0VG73 95 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 KIAA1644Q3SXP7 199 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 C16orf54Q6UWD8 224 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 UNQ5815/PRO19632Q6UWF5 114 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 CIARTQ8N365 385 aaPredicted RBP12.85□□□□□ -0.35
TVP23B-201ENST00000307767 VN1R17PQ8TDU5 208 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 WIPF2Q8TF74 440 aaPredicted RBP12.85□□□□□ -0.35
TVP23B-201ENST00000307767 BBC3Q96PG8 261 aaPredicted RBP12.85□□□□□ -0.35
TVP23B-201ENST00000307767 NAT8BQ9UHF3 227 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 USP24Q9UPU5 2620 aa12.85□□□□□ -0.35
TVP23B-201ENST00000307767 IGHV1-69DA0A0B4J2H0 117 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 IGHV1-69P01742 117 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 MT-ND6P03923 174 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 CTAG1AP78358 180 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 ECSCRQ19T08 205 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 WDR73Q6P4I2 378 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 LYPD1Q8N2G4 141 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 OR4F17Q8NGA8 305 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 GTSF1Q8WW33 167 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 TMEM18Q96B42 140 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 TXN2Q99757 166 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 TMUB1Q9BVT8 246 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 SMAD5-AS1Q9Y6J3 95 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 CACNA1BQ00975 2339 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 NPIPB6E9PJ23 425 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 M0R3E3 92 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 PRB1P04280 392 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 BRD3OSQ6XYD6 125 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 OR5R1Q8NH85 324 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 ASCL2Q99929 193 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 GNB4Q9HAV0 340 aa12.84□□□□□ -0.35
TVP23B-201ENST00000307767 A0A1B0GXF2 115 aa12.83□□□□□ -0.36
TVP23B-201ENST00000307767 HIGD1CA8MV81 97 aa12.83□□□□□ -0.36
TVP23B-201ENST00000307767 NDUFS8O00217 210 aa12.83□□□□□ -0.36
TVP23B-201ENST00000307767 SERF1AO75920 110 aa12.83□□□□□ -0.36
TVP23B-201ENST00000307767 SLAQ13239 276 aa12.83□□□□□ -0.36
TVP23B-201ENST00000307767 C15orf32Q32M92 178 aa12.83□□□□□ -0.36
TVP23B-201ENST00000307767 TMEM219Q86XT9 240 aa12.83□□□□□ -0.36
TVP23B-201ENST00000307767 SPOCK3Q9BQ16 436 aa12.83□□□□□ -0.36
TVP23B-201ENST00000307767 SPG11Q96JI7 2443 aa12.83□□□□□ -0.36
TVP23B-201ENST00000307767 IGHV4-38-2P0DP08 117 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 ATP5J2P56134 94 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 RHOGP84095 191 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 COX19Q49B96 90 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 TCF24Q7RTU0 167 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 NRGNQ92686 78 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 CCDC140Q96MF4 163 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 RPP21Q9H633 154 aaKnown RBP12.82□□□□□ -0.36
TVP23B-201ENST00000307767 RNF24Q9Y225 148 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 CELSR1Q9NYQ6 3014 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 PRNTQ86SH4 94 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 CMTM2Q8TAZ6 248 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 MEGF9Q9H1U4 602 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 ZFAND3Q9H8U3 227 aa12.82□□□□□ -0.36
TVP23B-201ENST00000307767 TRAV40A0A0B4J280 105 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 DIRC3C9JPN6 131 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 IGHG4P01861 327 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 HLA-DQA1P01909 254 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 CT83Q5H943 113 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 RASL11AQ6T310 242 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 TMEM75Q8N9X5 138 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 IGHV3OR16-8A0A075B7F1 116 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 IGHV3-35A0A0C4DH35 117 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 GPR183P32249 361 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 CRIP1P50238 77 aa12.81□□□□□ -0.36
TVP23B-201ENST00000307767 RAB4BP61018 213 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms