RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 FAM106AQ4KMX7 169 aa14.13□□□□□ -0.15
CDKN1B-201ENST00000228872 OR4X2Q8NGF9 303 aa14.13□□□□□ -0.15
CDKN1B-201ENST00000228872 ABHD17AQ96GS6 310 aa14.13□□□□□ -0.15
CDKN1B-201ENST00000228872 HARBI1Q96MB7 349 aa14.13□□□□□ -0.15
CDKN1B-201ENST00000228872 ARMS2P0C7Q2 107 aa14.13□□□□□ -0.15
CDKN1B-201ENST00000228872 FAM201AQ5SY85 155 aa14.13□□□□□ -0.15
CDKN1B-201ENST00000228872 SLC25A48Q6ZT89 311 aaKnown RBP14.13□□□□□ -0.15
CDKN1B-201ENST00000228872 Q71RC1 249 aaPredicted RBP14.13□□□□□ -0.15
CDKN1B-201ENST00000228872 MOGAT3Q86VF5 341 aa14.13□□□□□ -0.15
CDKN1B-201ENST00000228872 RPRMLQ8N4K4 120 aa14.13□□□□□ -0.15
CDKN1B-201ENST00000228872 KIR2DL2P43627 348 aaPredicted RBP14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 LOXL1Q08397 574 aaPredicted RBP14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 LGALS9BQ3B8N2 356 aa14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 LGALS9CQ6DKI2 356 aa14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 INSIG2Q9Y5U4 225 aa14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 TRAV8-1A0A0A6YYK1 113 aa14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 CGB1A6NKQ9 187 aa14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 GP9P14770 177 aa14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 ZCCHC24Q8N2G6 241 aaKnown RBP14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 GATD1Q8NB37 220 aa14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 OSR1Q8TAX0 266 aaPredicted RBP14.12□□□□□ -0.15
CDKN1B-201ENST00000228872 NDUFS8O00217 210 aa14.11□□□□□ -0.15
CDKN1B-201ENST00000228872 MEF2CQ06413 473 aaPredicted RBP14.11□□□□□ -0.15
CDKN1B-201ENST00000228872 RIGQ13278 110 aa14.11□□□□□ -0.15
CDKN1B-201ENST00000228872 C10orf55Q5SWW7 151 aa14.11□□□□□ -0.15
CDKN1B-201ENST00000228872 C22orf46C9J442 243 aa14.11□□□□□ -0.15
CDKN1B-201ENST00000228872 FABP2P12104 132 aa14.11□□□□□ -0.15
CDKN1B-201ENST00000228872 MSMPQ1L6U9 139 aa14.11□□□□□ -0.15
CDKN1B-201ENST00000228872 MRPL20Q9BYC9 149 aaKnown RBP14.11□□□□□ -0.15
CDKN1B-201ENST00000228872 HEATR1Q9H583 2144 aaKnown RBP14.11□□□□□ -0.15
CDKN1B-201ENST00000228872 hADV38S2A0JD32 116 aa14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 IFI27P40305 119 aaPredicted RBP14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 UCNP55089 124 aa14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 CACNG7P62955 275 aa14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 RPL24P83731 157 aaKnown RBP14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 SVIPQ8NHG7 77 aa14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 TEX48A0A1B0GUV7 120 aa14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 LHBP01229 141 aa14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 SCGB1A1P11684 91 aa14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 RUSC1-AS1Q66K80 236 aa14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 RPUSD1Q9UJJ7 312 aaKnown RBP14.1□□□□□ -0.15
CDKN1B-201ENST00000228872 PPIAL4CA0A0B4J2A2 164 aa14.09□□□□□ -0.15
CDKN1B-201ENST00000228872 SUB1P53999 127 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDKN1B-201ENST00000228872 PRNTQ86SH4 94 aa14.09□□□□□ -0.15
CDKN1B-201ENST00000228872 FLYWCH2Q96CP2 140 aaKnown RBP14.09□□□□□ -0.15
CDKN1B-201ENST00000228872 APC2O95996 2303 aa14.09□□□□□ -0.15
CDKN1B-201ENST00000228872 AZU1P20160 251 aa14.09□□□□□ -0.15
CDKN1B-201ENST00000228872 PRSS57Q6UWY2 283 aa14.09□□□□□ -0.15
CDKN1B-201ENST00000228872 SRSF12Q8WXF0 261 aaKnown RBP14.09□□□□□ -0.15
CDKN1B-201ENST00000228872 ATMQ13315 3056 aa14.09□□□□□ -0.15
CDKN1B-201ENST00000228872 IGHV1-18A0A0C4DH31 117 aa14.08□□□□□ -0.15
CDKN1B-201ENST00000228872 MBD3L4A6NDZ8 208 aaPredicted RBP14.08□□□□□ -0.15
CDKN1B-201ENST00000228872 MBD3L3A6NE82 208 aaPredicted RBP14.08□□□□□ -0.15
CDKN1B-201ENST00000228872 MBD3L5A6NJ08 208 aaPredicted RBP14.08□□□□□ -0.15
CDKN1B-201ENST00000228872 ZNF785A8K8V0 405 aa14.08□□□□□ -0.15
CDKN1B-201ENST00000228872 IGLV2-11P01706 119 aa14.08□□□□□ -0.15
CDKN1B-201ENST00000228872 SAMD5Q5TGI4 173 aa14.08□□□□□ -0.15
CDKN1B-201ENST00000228872 ZNF833PQ6ZTB9 187 aa14.08□□□□□ -0.15
CDKN1B-201ENST00000228872 PCP2Q8IVA1 136 aa14.08□□□□□ -0.15
CDKN1B-201ENST00000228872 MBD3L2Q8NHZ7 208 aaPredicted RBP14.08□□□□□ -0.15
CDKN1B-201ENST00000228872 IGLV1-44P01699 117 aa14.08□□□□□ -0.16
CDKN1B-201ENST00000228872 TMEM167AQ8TBQ9 72 aa14.08□□□□□ -0.16
CDKN1B-201ENST00000228872 GTSF1LQ9H1H1 148 aa14.08□□□□□ -0.16
CDKN1B-201ENST00000228872 TIMM23BQ5SRD1 257 aa14.08□□□□□ -0.16
CDKN1B-201ENST00000228872 LINC00574Q9H8X3 128 aa14.08□□□□□ -0.16
CDKN1B-201ENST00000228872 OTORQ9NRC9 128 aa14.08□□□□□ -0.16
CDKN1B-201ENST00000228872 SIGLEC8Q9NYZ4 499 aa14.08□□□□□ -0.16
CDKN1B-201ENST00000228872 LOC389332A0A1B0GUA5 103 aa14.07□□□□□ -0.16
CDKN1B-201ENST00000228872 TMEM189A5PLL7 270 aa14.07□□□□□ -0.16
CDKN1B-201ENST00000228872 GOLT1AQ6ZVE7 132 aa14.07□□□□□ -0.16
CDKN1B-201ENST00000228872 NMUP48645 174 aa14.07□□□□□ -0.16
CDKN1B-201ENST00000228872 SIGMAR1Q99720 223 aa14.07□□□□□ -0.16
CDKN1B-201ENST00000228872 PLSCR4Q9NRQ2 329 aa14.07□□□□□ -0.16
CDKN1B-201ENST00000228872 F11RQ9Y624 299 aaKnown RBP14.07□□□□□ -0.16
CDKN1B-201ENST00000228872 ANKRD11Q6UB99 2663 aaPredicted RBP14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 SPTBN2O15020 2390 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 DSCAML1Q8TD84 2053 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 A0A1B0GW15 77 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 SMIM13P0DJ93 91 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 TM4SF20Q53R12 229 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 SEM1Q6ZVN7 128 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 C1orf162Q8NEQ5 155 aaPredicted RBP14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 TRGV9Q99603 122 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 SMPXQ9UHP9 88 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 RAXQ9Y2V3 346 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 RP1L1Q8IWN7 2480 aaPredicted RBP14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 HOXB4P17483 251 aaPredicted RBP14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 Q8NA96 180 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 ZNF414Q96IQ9 312 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 NBEAQ8NFP9 2946 aa14.06□□□□□ -0.16
CDKN1B-201ENST00000228872 DMXL2Q8TDJ6 3036 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 ACACAQ13085 2346 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 PPIAL4EA0A075B759 164 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 PPIAL4FP0DN26 164 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 FCGR2BP31994 310 aaPredicted RBP14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 BMI1P35226 326 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 SMAGPQ0VAQ4 97 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 TMEM30BQ3MIR4 351 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 GAFA1Q96PS6 74 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 D6R8Y8 96 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms