RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL1	YPL008W	TY1A-ML2	P0CX76	440 aa		4.22	□□□□□ -1.73
CHL1	YPL008W	EFT1	P32324	842 aa	Known RBP	4.22	□□□□□ -1.73
CHL1	YPL008W	RRT2	P38332	387 aa		4.22	□□□□□ -1.73
CHL1	YPL008W	PEX28	P38848	579 aa		4.22	□□□□□ -1.73
CHL1	YPL008W	RAD26	P40352	1085 aa		4.22	□□□□□ -1.73
CHL1	YPL008W	DAS1	P47005	663 aa		4.22	□□□□□ -1.73
CHL1	YPL008W	SIW14	P53965	281 aa		4.22	□□□□□ -1.73
CHL1	YPL008W	SHR3	Q02774	210 aa		4.22	□□□□□ -1.73
CHL1	YPL008W	SXM1	Q04175	944 aa	Known RBP	4.22	□□□□□ -1.73
CHL1	YPL008W	COQ9	Q05779	260 aa		4.22	□□□□□ -1.73
CHL1	YPL008W	IWR1	Q07532	353 aa	Predicted RBP	4.22	□□□□□ -1.73
CHL1	YPL008W	TAF10	Q12030	206 aa		4.22	□□□□□ -1.73
CHL1	YPL008W	TY1A-GR1	Q12085	440 aa		4.22	□□□□□ -1.73
CHL1	YPL008W	SGT2	Q12118	346 aa	Known RBP	4.22	□□□□□ -1.73
CHL1	YPL008W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.22	□□□□□ -1.73
CHL1	YPL008W	TY1A-OL	Q92392	440 aa	Known RBP	4.22	□□□□□ -1.73
CHL1	YPL008W	ARD1	P07347	238 aa	Predicted RBP	4.21	□□□□□ -1.73
CHL1	YPL008W	YER152C	P10356	443 aa		4.21	□□□□□ -1.73
CHL1	YPL008W	RNA1	P11745	407 aa	Known RBP	4.21	□□□□□ -1.73
CHL1	YPL008W	CDC48	P25694	835 aa	Known RBP	4.21	□□□□□ -1.73
CHL1	YPL008W	ECM32	P32644	1121 aa	Known RBP	4.21	□□□□□ -1.73
CHL1	YPL008W	SKG6	P32900	734 aa	Predicted RBP	4.21	□□□□□ -1.73
CHL1	YPL008W	LOS1	P33418	1100 aa	Predicted RBP	4.21	□□□□□ -1.73
CHL1	YPL008W	YBL055C	P34220	418 aa	Predicted RBP	4.21	□□□□□ -1.73
CHL1	YPL008W	CSG2	P35206	410 aa		4.21	□□□□□ -1.73
CHL1	YPL008W	YSW1	P38280	609 aa		4.21	□□□□□ -1.73
CHL1	YPL008W	SKP1	P52286	194 aa		4.21	□□□□□ -1.73
CHL1	YPL008W	YNL247W	P53852	767 aa	Known RBP	4.21	□□□□□ -1.73
CHL1	YPL008W	SPO20	Q04359	397 aa		4.21	□□□□□ -1.73
CHL1	YPL008W	TDA9	Q04545	1251 aa		4.21	□□□□□ -1.73
CHL1	YPL008W	IES4	Q08561	116 aa		4.21	□□□□□ -1.73
CHL1	YPL008W	ERP3	Q12403	225 aa		4.21	□□□□□ -1.73
CHL1	YPL008W	YOL087C	Q99247	1116 aa		4.21	□□□□□ -1.73
CHL1	YPL008W	PEP5	P12868	1029 aa		4.21	□□□□□ -1.74
CHL1	YPL008W	ILV6	P25605	309 aa	Known RBP	4.21	□□□□□ -1.74
CHL1	YPL008W	SBA1	P28707	216 aa	Known RBP	4.21	□□□□□ -1.74
CHL1	YPL008W	BUD2	P33314	1104 aa		4.21	□□□□□ -1.74
CHL1	YPL008W	TFA2	P36145	328 aa		4.21	□□□□□ -1.74
CHL1	YPL008W	REG2	P38232	338 aa		4.21	□□□□□ -1.74
CHL1	YPL008W	EAF5	P39995	279 aa		4.21	□□□□□ -1.74
CHL1	YPL008W	KAP123	P40069	1113 aa	Known RBP	4.21	□□□□□ -1.74
CHL1	YPL008W	HSH155	P49955	971 aa	Known RBP	4.21	□□□□□ -1.74
CHL1	YPL008W	HOP2	P53187	214 aa		4.21	□□□□□ -1.74
CHL1	YPL008W	YLL058W	Q12198	575 aa		4.21	□□□□□ -1.74
CHL1	YPL008W	TUB3	P09734	445 aa	Known RBP	4.2	□□□□□ -1.74
CHL1	YPL008W	SFL1	P20134	766 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
CHL1	YPL008W	MRPL25	P23369	157 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	KAP122	P32767	1081 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	ECM2	P38241	364 aa	Known RBP	4.2	□□□□□ -1.74
CHL1	YPL008W	MMS4	P38257	691 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	PHO86	P46956	311 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	CPR7	P47103	393 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	HLJ1	P48353	224 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	CLA4	P48562	842 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	ASN1	P49089	572 aa	Known RBP	4.2	□□□□□ -1.74
CHL1	YPL008W	CUS1	Q02554	436 aa	Predicted RBP	4.2	□□□□□ -1.74
CHL1	YPL008W	GRX3	Q03835	250 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	YOR223W	Q12015	292 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	AI5_BETA	Q9ZZX0	354 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	AFT1	P22149	690 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	YCR051W	P25631	222 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	PCL2	P25693	308 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	YMC2	P38087	329 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	EXO84	P38261	753 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	POP4	P38336	279 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	END3	P39013	349 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	DSN1	P40568	576 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	RIM8	P53179	542 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	ERP6	P53198	216 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	DRN1	P53255	507 aa	Known RBP	4.2	□□□□□ -1.74
CHL1	YPL008W	YGR130C	P53278	816 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	CPR6	P53691	371 aa	Known RBP	4.2	□□□□□ -1.74
CHL1	YPL008W	YNL146W	P53906	100 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	DIG1	Q03063	452 aa	Known RBP	4.2	□□□□□ -1.74
CHL1	YPL008W	PPM1	Q04081	328 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	YDR222W	Q04925	415 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	RGA2	Q06407	1009 aa		4.2	□□□□□ -1.74
CHL1	YPL008W	GAL1	P04385	528 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	ATP4	P05626	244 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	DED1	P06634	604 aa	Known RBP	4.19	□□□□□ -1.74
CHL1	YPL008W	YML002W	P0CF17	737 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	PRP9	P19736	530 aa	Known RBP	4.19	□□□□□ -1.74
CHL1	YPL008W	DAL3	P32459	195 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	LYP1	P32487	611 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	RGT1	P32862	1170 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	PEX6	P33760	1030 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	OAF3	P36023	863 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	CCL1	P37366	393 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	MRX3	P38172	270 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	PCA1	P38360	1216 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	ERP2	P39704	215 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	PTC2	P39966	464 aa	Known RBP	4.19	□□□□□ -1.74
CHL1	YPL008W	YNL320W	P42840	284 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	PSP2	P50109	593 aa	Known RBP	4.19	□□□□□ -1.74
CHL1	YPL008W	IVY1	Q04934	453 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	SFH1	Q06168	426 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	YDL073W	Q07454	984 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	VHS3	Q08438	674 aa		4.19	□□□□□ -1.74
CHL1	YPL008W	MRP10	O75012	95 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms