RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	PEX14	P53112	341 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	FHN1	P53279	174 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	MUK1	Q02866	612 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	MF(ALPHA)2	P32435	120 aa		4.77	□□□□□ -1.65
YTM1	YOR272W	COS111	P38308	924 aa		4.77	□□□□□ -1.65
YTM1	YOR272W	YIL077C	P40508	320 aa		4.77	□□□□□ -1.65
YTM1	YOR272W	SPO1	P53541	631 aa		4.77	□□□□□ -1.65
YTM1	YOR272W	MAK10	Q02197	733 aa		4.77	□□□□□ -1.65
YTM1	YOR272W	CHS5	Q12114	671 aa	Known RBP	4.77	□□□□□ -1.65
YTM1	YOR272W	KAR1	P11927	433 aa		4.76	□□□□□ -1.65
YTM1	YOR272W	ABF1	P14164	731 aa		4.76	□□□□□ -1.65
YTM1	YOR272W	CDC26	P14724	124 aa		4.76	□□□□□ -1.65
YTM1	YOR272W	COX11	P19516	300 aa	Known RBP	4.76	□□□□□ -1.65
YTM1	YOR272W	HEM12	P32347	362 aa	Predicted RBP	4.76	□□□□□ -1.65
YTM1	YOR272W	NTH1	P32356	751 aa		4.76	□□□□□ -1.65
YTM1	YOR272W	SRP68	P38687	599 aa	Known RBP	4.76	□□□□□ -1.65
YTM1	YOR272W	UBA2	P52488	636 aa		4.76	□□□□□ -1.65
YTM1	YOR272W	ATG4	P53867	494 aa		4.76	□□□□□ -1.65
YTM1	YOR272W	SMX3	P54999	86 aa	Predicted RBP	4.76	□□□□□ -1.65
YTM1	YOR272W	RGC1	Q06108	1083 aa	Known RBP	4.76	□□□□□ -1.65
YTM1	YOR272W	YFT2	Q06676	274 aa		4.76	□□□□□ -1.65
YTM1	YOR272W	MLH3	Q12083	715 aa		4.76	□□□□□ -1.65
YTM1	YOR272W	HCA4	P20448	770 aa	Known RBP	4.75	□□□□□ -1.65
YTM1	YOR272W	PRE4	P30657	266 aa		4.75	□□□□□ -1.65
YTM1	YOR272W	SER1	P33330	395 aa	Known RBP	4.75	□□□□□ -1.65
YTM1	YOR272W	TFC4	P33339	1025 aa		4.75	□□□□□ -1.65
YTM1	YOR272W	ARG2	P40360	574 aa		4.75	□□□□□ -1.65
YTM1	YOR272W	NDC80	P40460	691 aa		4.75	□□□□□ -1.65
YTM1	YOR272W	CTR1	P49573	406 aa		4.75	□□□□□ -1.65
YTM1	YOR272W	NGL1	Q08213	363 aa	Known RBP	4.75	□□□□□ -1.65
YTM1	YOR272W	THR1	P17423	357 aa	Known RBP	4.74	□□□□□ -1.65
YTM1	YOR272W	ATP12	P22135	325 aa		4.74	□□□□□ -1.65
YTM1	YOR272W	PLC1	P32383	869 aa		4.74	□□□□□ -1.65
YTM1	YOR272W	YHR033W	P38690	423 aa		4.74	□□□□□ -1.65
YTM1	YOR272W	PEA2	P40091	420 aa		4.74	□□□□□ -1.65
YTM1	YOR272W	SDS3	P40505	327 aa		4.74	□□□□□ -1.65
YTM1	YOR272W	MPS3	P47069	682 aa		4.74	□□□□□ -1.65
YTM1	YOR272W	RFX1	P48743	811 aa		4.74	□□□□□ -1.65
YTM1	YOR272W	TMN2	Q04562	672 aa		4.74	□□□□□ -1.65
YTM1	YOR272W	PEX15	Q08215	383 aa		4.74	□□□□□ -1.65
YTM1	YOR272W	CDC43	P18898	376 aa		4.73	□□□□□ -1.65
YTM1	YOR272W	ROX1	P25042	368 aa		4.73	□□□□□ -1.65
YTM1	YOR272W	HXT4	P32467	576 aa		4.73	□□□□□ -1.65
YTM1	YOR272W	PDR5	P33302	1511 aa	Known RBP	4.73	□□□□□ -1.65
YTM1	YOR272W	GLG1	P36143	616 aa		4.73	□□□□□ -1.65
YTM1	YOR272W	CTP1	P38152	299 aa		4.73	□□□□□ -1.65
YTM1	YOR272W	YRB30	P53107	440 aa	Predicted RBP	4.73	□□□□□ -1.65
YTM1	YOR272W	HOL1	P53389	586 aa		4.73	□□□□□ -1.65
YTM1	YOR272W	FDC1	Q03034	503 aa		4.73	□□□□□ -1.65
YTM1	YOR272W	USV1	Q12132	391 aa		4.73	□□□□□ -1.65
YTM1	YOR272W	FUB1	P25659	250 aa		4.72	□□□□□ -1.65
YTM1	YOR272W	KHA1	P40309	873 aa		4.72	□□□□□ -1.65
YTM1	YOR272W	PRM2	P40534	656 aa		4.72	□□□□□ -1.65
YTM1	YOR272W	YGR151C	P53287	111 aa		4.72	□□□□□ -1.65
YTM1	YOR272W	HLR1	Q04429	423 aa		4.72	□□□□□ -1.65
YTM1	YOR272W	PHM6	Q05637	104 aa		4.72	□□□□□ -1.65
YTM1	YOR272W	YDL086W	Q07505	273 aa		4.72	□□□□□ -1.65
YTM1	YOR272W	TMA7	Q3E764	64 aa	Known RBP	4.72	□□□□□ -1.65
YTM1	YOR272W	RNA1	P11745	407 aa	Known RBP	4.71	□□□□□ -1.66
YTM1	YOR272W	GRX7	P38068	203 aa		4.71	□□□□□ -1.66
YTM1	YOR272W	IRC5	P43610	853 aa		4.71	□□□□□ -1.66
YTM1	YOR272W	GND2	P53319	492 aa		4.71	□□□□□ -1.66
YTM1	YOR272W	YSH1	Q06224	779 aa	Predicted RBP	4.71	□□□□□ -1.66
YTM1	YOR272W	AIM41	Q12032	185 aa		4.71	□□□□□ -1.66
YTM1	YOR272W	GCN2	P15442	1659 aa		4.71	□□□□□ -1.66
YTM1	YOR272W	TUF1	P02992	437 aa	Known RBP	4.7	□□□□□ -1.66
YTM1	YOR272W	YEL076C-A	P0CX16	216 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	YLR464W	P0CX17	216 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	KIN3	P22209	435 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	DMC1	P25453	334 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	MSS1	P32559	526 aa	Predicted RBP	4.7	□□□□□ -1.66
YTM1	YOR272W	MTH1	P35198	433 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	CDS1	P38221	457 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	RIX1	P38883	763 aa	Predicted RBP	4.7	□□□□□ -1.66
YTM1	YOR272W	CRG1	P38892	291 aa	RIP-Chip data	4.7	□□□□□ -1.66	not detected
YTM1	YOR272W	YJL206C	P39529	758 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	BDH2	P39713	417 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	YEL076C	P39971	216 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	FTR1	P40088	404 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	YIR014W	P40570	242 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	STU2	P46675	888 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	PEX8	P53248	589 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	SQS1	P53866	767 aa	Known RBP	4.7	□□□□□ -1.66
YTM1	YOR272W	IRC10	Q08118	586 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	BUD21	Q08492	214 aa	Predicted RBP	4.7	□□□□□ -1.66
YTM1	YOR272W	CWC2	Q12046	339 aa	Predicted RBP	4.7	□□□□□ -1.66
YTM1	YOR272W	SLX4	Q12098	748 aa		4.7	□□□□□ -1.66
YTM1	YOR272W	MRH1	Q12117	320 aa	Predicted RBP	4.7	□□□□□ -1.66
YTM1	YOR272W	SPC110	P32380	944 aa		4.69	□□□□□ -1.66
YTM1	YOR272W	SET3	P36124	751 aa		4.69	□□□□□ -1.66
YTM1	YOR272W	GMH1	P36125	273 aa		4.69	□□□□□ -1.66
YTM1	YOR272W	APL3	P38065	1025 aa		4.69	□□□□□ -1.66
YTM1	YOR272W	FUN12	P39730	1002 aa	Known RBP	4.69	□□□□□ -1.66
YTM1	YOR272W	PEF1	P53238	335 aa		4.69	□□□□□ -1.66
YTM1	YOR272W	CEF1	Q03654	590 aa	Predicted RBP	4.69	□□□□□ -1.66
YTM1	YOR272W	ECM38	Q05902	660 aa	Predicted RBP	4.69	□□□□□ -1.66
YTM1	YOR272W	IZH3	Q07959	543 aa		4.69	□□□□□ -1.66
YTM1	YOR272W	BMS1	Q08965	1183 aa	Known RBP	4.69	□□□□□ -1.66
YTM1	YOR272W	VPS5	Q92331	675 aa		4.69	□□□□□ -1.66
YTM1	YOR272W	HMG2	P12684	1045 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms