RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W RKM2Q03942 479 aa6.16□□□□□ -1.42
ATG4YNL223W CDC73Q06697 393 aa6.16□□□□□ -1.42
ATG4YNL223W THI20Q08224 551 aa6.16□□□□□ -1.42
ATG4YNL223W MPC54Q08550 464 aa6.16□□□□□ -1.42
ATG4YNL223W APC5Q08683 685 aa6.16□□□□□ -1.42
ATG4YNL223W THI21Q08975 551 aa6.16□□□□□ -1.42
ATG4YNL223W AVL9Q12500 764 aa6.16□□□□□ -1.42
ATG4YNL223W IZH4Q99393 312 aa6.16□□□□□ -1.42
ATG4YNL223W CMD1P06787 147 aaKnown RBP6.15□□□□□ -1.42
ATG4YNL223W HXT3P32466 567 aaKnown RBP6.15□□□□□ -1.42
ATG4YNL223W YBR053CP38235 358 aa6.15□□□□□ -1.42
ATG4YNL223W MSR1P38714 643 aa6.15□□□□□ -1.42
ATG4YNL223W RAD55P38953 406 aa6.15□□□□□ -1.42
ATG4YNL223W RRD1P40454 393 aaKnown RBP6.15□□□□□ -1.42
ATG4YNL223W OPT1P40897 799 aa6.15□□□□□ -1.42
ATG4YNL223W FOL2P51601 243 aaKnown RBP6.15□□□□□ -1.42
ATG4YNL223W COG6P53959 839 aa6.15□□□□□ -1.42
ATG4YNL223W BET4Q00618 327 aa6.15□□□□□ -1.42
ATG4YNL223W MRS2Q01926 470 aa6.15□□□□□ -1.42
ATG4YNL223W SKY1Q03656 742 aa6.15□□□□□ -1.42
ATG4YNL223W YMR027WQ04371 470 aa6.15□□□□□ -1.42
ATG4YNL223W PIG1Q06216 648 aa6.15□□□□□ -1.42
ATG4YNL223W DDC1Q08949 612 aa6.15□□□□□ -1.42
ATG4YNL223W NBP2Q12163 236 aa6.15□□□□□ -1.42
ATG4YNL223W ADK2P26364 225 aa6.15□□□□□ -1.43
ATG4YNL223W PEP7P32609 515 aa6.15□□□□□ -1.43
ATG4YNL223W HMT1P38074 348 aa6.15□□□□□ -1.43
ATG4YNL223W SAP30P38429 201 aa6.15□□□□□ -1.43
ATG4YNL223W CDC1P40986 491 aa6.15□□□□□ -1.43
ATG4YNL223W ZIP2P53061 704 aa6.15□□□□□ -1.43
ATG4YNL223W TPO1Q07824 586 aa6.15□□□□□ -1.43
ATG4YNL223W TAF10Q12030 206 aa6.15□□□□□ -1.43
ATG4YNL223W APM4Q99186 491 aa6.15□□□□□ -1.43
ATG4YNL223W ILV2P07342 687 aaKnown RBP6.14□□□□□ -1.43
ATG4YNL223W RPB2P08518 1224 aaKnown RBP6.14□□□□□ -1.43
ATG4YNL223W IMA3P0CW40 589 aa6.14□□□□□ -1.43
ATG4YNL223W IMA4P0CW41 589 aa6.14□□□□□ -1.43
ATG4YNL223W MSD1P15179 658 aaKnown RBP6.14□□□□□ -1.43
ATG4YNL223W YCR051WP25631 222 aa6.14□□□□□ -1.43
ATG4YNL223W MET4P32389 672 aa6.14□□□□□ -1.43
ATG4YNL223W PAM1P37304 830 aaKnown RBP6.14□□□□□ -1.43
ATG4YNL223W DIA4P38705 446 aaPredicted RBP6.14□□□□□ -1.43
ATG4YNL223W RIM4P38741 713 aa6.14□□□□□ -1.43
ATG4YNL223W AIM18P38884 321 aa6.14□□□□□ -1.43
ATG4YNL223W CKB2P38930 258 aa6.14□□□□□ -1.43
ATG4YNL223W FHL1P39521 936 aa6.14□□□□□ -1.43
ATG4YNL223W ALA1P40825 983 aaKnown RBP6.14□□□□□ -1.43
ATG4YNL223W RRT5P43607 289 aa6.14□□□□□ -1.43
ATG4YNL223W TRS85P46944 698 aa6.14□□□□□ -1.43
ATG4YNL223W SAE2P46946 345 aa6.14□□□□□ -1.43
ATG4YNL223W RFX1P48743 811 aa6.14□□□□□ -1.43
ATG4YNL223W PEX31P53203 462 aa6.14□□□□□ -1.43
ATG4YNL223W NMA111P53920 997 aa6.14□□□□□ -1.43
ATG4YNL223W KTR6P54070 446 aa6.14□□□□□ -1.43
ATG4YNL223W SND1Q04007 877 aa6.14□□□□□ -1.43
ATG4YNL223W HRD3Q05787 833 aa6.14□□□□□ -1.43
ATG4YNL223W IMA2Q08295 589 aa6.14□□□□□ -1.43
ATG4YNL223W YLL056CQ12177 298 aa6.14□□□□□ -1.43
ATG4YNL223W MRPL25P23369 157 aa6.13□□□□□ -1.43
ATG4YNL223W KAR4P25583 335 aa6.13□□□□□ -1.43
ATG4YNL223W VPH1P32563 840 aaKnown RBP6.13□□□□□ -1.43
ATG4YNL223W YBR056WP38081 501 aa6.13□□□□□ -1.43
ATG4YNL223W SIF2P38262 535 aa6.13□□□□□ -1.43
ATG4YNL223W DMA1P38823 416 aa6.13□□□□□ -1.43
ATG4YNL223W SCC4P40090 624 aa6.13□□□□□ -1.43
ATG4YNL223W MND2P40577 368 aa6.13□□□□□ -1.43
ATG4YNL223W YFL040WP43562 540 aa6.13□□□□□ -1.43
ATG4YNL223W GUF1P46943 645 aa6.13□□□□□ -1.43
ATG4YNL223W NUT1P53114 1132 aa6.13□□□□□ -1.43
ATG4YNL223W ADA2Q02336 434 aa6.13□□□□□ -1.43
ATG4YNL223W INA17Q02888 182 aa6.13□□□□□ -1.43
ATG4YNL223W PML39Q03760 334 aa6.13□□□□□ -1.43
ATG4YNL223W AIM32Q04689 311 aa6.13□□□□□ -1.43
ATG4YNL223W HRT3Q12347 344 aa6.13□□□□□ -1.43
ATG4YNL223W NCA2Q12374 616 aa6.13□□□□□ -1.43
ATG4YNL223W QCR6P00127 147 aa6.12□□□□□ -1.43
ATG4YNL223W PAB1P04147 577 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
ATG4YNL223W ATP1P07251 545 aaKnown RBP6.12□□□□□ -1.43
ATG4YNL223W ILS1P09436 1072 aaKnown RBP6.12□□□□□ -1.43
ATG4YNL223W SRV2P17555 526 aaKnown RBP6.12□□□□□ -1.43
ATG4YNL223W CDC20P26309 610 aa6.12□□□□□ -1.43
ATG4YNL223W URA7P28274 579 aaKnown RBP6.12□□□□□ -1.43
ATG4YNL223W GCS1P35197 352 aa6.12□□□□□ -1.43
ATG4YNL223W RFS1P38234 210 aaKnown RBP6.12□□□□□ -1.43
ATG4YNL223W GDT1P38301 280 aaPredicted RBP6.12□□□□□ -1.43
ATG4YNL223W FIR1P40020 876 aa6.12□□□□□ -1.43
ATG4YNL223W VTC4P47075 721 aa6.12□□□□□ -1.43
ATG4YNL223W TAH11P47112 604 aa6.12□□□□□ -1.43
ATG4YNL223W MSH6Q03834 1242 aa6.12□□□□□ -1.43
ATG4YNL223W TDA5Q06417 326 aaKnown RBP6.12□□□□□ -1.43
ATG4YNL223W YDL073WQ07454 984 aa6.12□□□□□ -1.43
ATG4YNL223W AAD4Q07747 329 aa6.12□□□□□ -1.43
ATG4YNL223W LEA1Q08963 238 aaPredicted RBP6.12□□□□□ -1.43
ATG4YNL223W YLR422WQ06409 1932 aa6.11□□□□□ -1.43
ATG4YNL223W CCP1P00431 361 aa6.11□□□□□ -1.43
ATG4YNL223W KGD2P19262 463 aaPredicted RBP6.11□□□□□ -1.43
ATG4YNL223W RGR1P19263 1082 aa6.11□□□□□ -1.43
ATG4YNL223W TSR4P25040 408 aa6.11□□□□□ -1.43
ATG4YNL223W DSS4P32601 143 aa6.11□□□□□ -1.43
ATG4YNL223W RAD5P32849 1169 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms