RNA–Protein interactions for RNA: YNL093W

YPT53, Transcript of Stress-induced Rab family GTPase, yeast

Gene YPT53, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT53	YNL093W	YBR138C	P38277	524 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	PHO12	P38693	467 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	LSM5	P40089	93 aa	Known RBP	4.23	□□□□□ -1.73
YPT53	YNL093W	QRI7	P43122	407 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	DUG1	P43616	481 aa	Known RBP	4.23	□□□□□ -1.73
YPT53	YNL093W	ABM1	P47146	123 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	GCV1	P48015	400 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	DCP2	P53550	970 aa	Known RBP	4.23	□□□□□ -1.73
YPT53	YNL093W	YNR061C	P53747	219 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	ORC3	P54790	616 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	ENA2	Q01896	1091 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	TOF2	Q02208	771 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	FCP1	Q03254	732 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	GYL1	Q04322	720 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	ECM7	Q06200	448 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	TOS4	Q06266	489 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	HIM1	Q06674	414 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	VAC14	Q06708	880 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
YPT53	YNL093W	YLR001C	Q07895	862 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	NOC3	Q07896	663 aa	Predicted RBP	4.23	□□□□□ -1.73
YPT53	YNL093W	RRT8	Q08219	342 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	TRE1	Q08919	783 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	YIG1	Q08956	461 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	PDH1	Q12428	516 aa	Known RBP	4.23	□□□□□ -1.73
YPT53	YNL093W	PFK27	Q12471	397 aa	Predicted RBP	4.23	□□□□□ -1.73
YPT53	YNL093W	ENA5	Q12691	1091 aa		4.23	□□□□□ -1.73
YPT53	YNL093W	RPS3	P05750	240 aa	Known RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	CAR2	P07991	424 aa	Known RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	FBP1	P09201	348 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	CKA1	P15790	372 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	CDC42	P19073	191 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	RPI1	P23250	407 aa	Known RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	STE50	P25344	346 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	RRP7	P25368	297 aa	Predicted RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	MLS1	P30952	554 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	PUP2	P32379	260 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	MEI5	P32489	222 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	PRP19	P32523	503 aa	Known RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	GYP6	P32806	458 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	DUT1	P33317	147 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	SLC1	P33333	303 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	TIF3	P34167	436 aa	Known RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	MRP8	P35719	219 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	RSM22	P36056	628 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	BET3	P36149	193 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	ECM2	P38241	364 aa	Known RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	PIC2	P40035	300 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	MGS1	P40151	587 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	ATF1	P40353	525 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	IMA5	P40884	581 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	ARF3	P40994	183 aa	RIP-Chip data	4.22	□□□□□ -1.73	not detected
YPT53	YNL093W	SEC26	P41810	973 aa	Known RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	NIT2	P47016	307 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	LYS4	P49367	693 aa	Predicted RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	ALT1	P52893	592 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	MIG2	P53035	382 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	YGL140C	P53120	1219 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	YGR067C	P53243	804 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	YGR250C	P53316	781 aa	Known RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	LCD1	Q04377	747 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	VBA4	Q04602	768 aa	Known RBP	4.22	□□□□□ -1.73
YPT53	YNL093W	RSC3	Q06639	885 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	VPS54	Q12071	889 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	TY3A-G	Q12173	290 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	TY3A-I	Q99219	290 aa		4.22	□□□□□ -1.73
YPT53	YNL093W	GAL7	P08431	366 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	GSY1	P23337	708 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	PRE8	P23639	250 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	PAP1	P29468	568 aa	Known RBP	4.21	□□□□□ -1.74
YPT53	YNL093W	PRO1	P32264	428 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	NGG1	P32494	702 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	SUR1	P33300	382 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	AIM3	P38266	947 aa	Known RBP	4.21	□□□□□ -1.74
YPT53	YNL093W	COS111	P38308	924 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	TCD1	P38756	429 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	GCN20	P43535	752 aa	Known RBP	4.21	□□□□□ -1.74
YPT53	YNL093W	RMD8	P43620	662 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	NOP9	P47077	666 aa	Known RBP	4.21	□□□□□ -1.74
YPT53	YNL093W	PAN2	P53010	1115 aa	Predicted RBP	4.21	□□□□□ -1.74
YPT53	YNL093W	MAL11	P53048	616 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	ART5	P53244	586 aa	Known RBP	4.21	□□□□□ -1.74
YPT53	YNL093W	OGG1	P53397	376 aa	Predicted RBP	4.21	□□□□□ -1.74
YPT53	YNL093W	TOF1	P53840	1238 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	CDC55	Q00362	526 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	RSC4	Q02206	625 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	RPM2	Q02773	1202 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	UTP5	Q04177	643 aa	Known RBP	4.21	□□□□□ -1.74
YPT53	YNL093W	MFB1	Q04922	465 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	KAP95	Q06142	861 aa	Known RBP	4.21	□□□□□ -1.74
YPT53	YNL093W	DSE3	Q08729	430 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	YDL177C	Q12257	170 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	RMP1	Q12530	201 aa		4.21	□□□□□ -1.74
YPT53	YNL093W	MET17	P06106	444 aa		4.2	□□□□□ -1.74
YPT53	YNL093W	GFA1	P14742	717 aa	Known RBP	4.2	□□□□□ -1.74
YPT53	YNL093W	FUS3	P16892	353 aa	Known RBP	4.2	□□□□□ -1.74
YPT53	YNL093W	DBP3	P20447	523 aa	Known RBP	4.2	□□□□□ -1.74
YPT53	YNL093W	ADE2	P21264	571 aa	Known RBP	4.2	□□□□□ -1.74
YPT53	YNL093W	VBA3	P25594	458 aa		4.2	□□□□□ -1.74
YPT53	YNL093W	MKK2	P32491	506 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms