RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C SEC12P11655 471 aa5.31□□□□□ -1.56
CUS1YMR240C THR1P17423 357 aaKnown RBP5.31□□□□□ -1.56
CUS1YMR240C VPS33P20795 691 aa5.31□□□□□ -1.56
CUS1YMR240C SIR1P21691 654 aa5.31□□□□□ -1.56
CUS1YMR240C MCM3P24279 971 aaKnown RBP5.31□□□□□ -1.56
CUS1YMR240C PRP45P28004 379 aaPredicted RBP5.31□□□□□ -1.56
CUS1YMR240C LRO1P40345 661 aa5.31□□□□□ -1.56
CUS1YMR240C IRC24P40580 263 aa5.31□□□□□ -1.56
CUS1YMR240C YGR054WP53235 642 aaKnown RBP5.31□□□□□ -1.56
CUS1YMR240C TIM50Q02776 476 aa5.31□□□□□ -1.56
CUS1YMR240C BLS1Q06071 122 aa5.31□□□□□ -1.56
CUS1YMR240C ARR3Q06598 404 aa5.31□□□□□ -1.56
CUS1YMR240C YDL121CQ07541 149 aa5.31□□□□□ -1.56
CUS1YMR240C IZH3Q07959 543 aa5.31□□□□□ -1.56
CUS1YMR240C NKP1Q12493 238 aa5.31□□□□□ -1.56
CUS1YMR240C PHO5P00635 467 aa5.3□□□□□ -1.56
CUS1YMR240C ABF1P14164 731 aa5.3□□□□□ -1.56
CUS1YMR240C PPS1P38148 807 aa5.3□□□□□ -1.56
CUS1YMR240C NAB3P38996 802 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
CUS1YMR240C YJL193WP39542 402 aa5.3□□□□□ -1.56
CUS1YMR240C YEL025CP39991 1188 aa5.3□□□□□ -1.56
CUS1YMR240C VPS72Q03388 795 aa5.3□□□□□ -1.56
CUS1YMR240C IWR1Q07532 353 aaPredicted RBP5.3□□□□□ -1.56
CUS1YMR240C FRD1P32614 470 aaKnown RBP5.29□□□□□ -1.56
CUS1YMR240C PPE1P38796 400 aa5.29□□□□□ -1.56
CUS1YMR240C ERR3P42222 437 aa5.29□□□□□ -1.56
CUS1YMR240C TAF1P46677 1066 aa5.29□□□□□ -1.56
CUS1YMR240C ATG4P53867 494 aa5.29□□□□□ -1.56
CUS1YMR240C ACS1Q01574 713 aa5.29□□□□□ -1.56
CUS1YMR240C KIN4Q01919 800 aa5.29□□□□□ -1.56
CUS1YMR240C YML131WQ03102 365 aa5.29□□□□□ -1.56
CUS1YMR240C YSH1Q06224 779 aaPredicted RBP5.29□□□□□ -1.56
CUS1YMR240C MIS1P09440 975 aaKnown RBP5.28□□□□□ -1.56
CUS1YMR240C FUB1P25659 250 aa5.28□□□□□ -1.56
CUS1YMR240C DHR2P36009 735 aaPredicted RBP5.28□□□□□ -1.56
CUS1YMR240C SSL2Q00578 843 aa5.28□□□□□ -1.56
CUS1YMR240C SVL3Q03088 825 aaKnown RBP5.28□□□□□ -1.56
CUS1YMR240C TRS130Q03660 1102 aa5.28□□□□□ -1.56
CUS1YMR240C ENT2Q05785 613 aa5.28□□□□□ -1.56
CUS1YMR240C YDL086WQ07505 273 aa5.28□□□□□ -1.56
CUS1YMR240C PCK1P10963 549 aa5.27□□□□□ -1.57
CUS1YMR240C GFA1P14742 717 aaKnown RBP5.27□□□□□ -1.57
CUS1YMR240C POL3P15436 1097 aa5.27□□□□□ -1.57
CUS1YMR240C YCL049CP25577 312 aa5.27□□□□□ -1.57
CUS1YMR240C SSH4P32343 579 aa5.27□□□□□ -1.57
CUS1YMR240C XRS2P33301 854 aa5.27□□□□□ -1.57
CUS1YMR240C YHL017WP38745 532 aa5.27□□□□□ -1.57
CUS1YMR240C GIP4P39732 760 aa5.27□□□□□ -1.57
CUS1YMR240C VFA1P40080 203 aa5.27□□□□□ -1.57
CUS1YMR240C PUG1P40100 303 aa5.27□□□□□ -1.57
CUS1YMR240C AIM21P40563 679 aa5.27□□□□□ -1.57
CUS1YMR240C POL31P46957 487 aa5.27□□□□□ -1.57
CUS1YMR240C YGR151CP53287 111 aa5.27□□□□□ -1.57
CUS1YMR240C TRS31Q03337 283 aa5.27□□□□□ -1.57
CUS1YMR240C USV1Q12132 391 aa5.27□□□□□ -1.57
CUS1YMR240C MTF2P10849 440 aa5.26□□□□□ -1.57
CUS1YMR240C DSS4P32601 143 aa5.26□□□□□ -1.57
CUS1YMR240C BEM3P32873 1128 aa5.26□□□□□ -1.57
CUS1YMR240C MRPL7P36519 292 aa5.26□□□□□ -1.57
CUS1YMR240C PSY4P38193 441 aa5.26□□□□□ -1.57
CUS1YMR240C FAF1P40546 346 aaPredicted RBP5.26□□□□□ -1.57
CUS1YMR240C IML2P47031 731 aa5.26□□□□□ -1.57
CUS1YMR240C ARC35P53731 342 aaKnown RBP5.26□□□□□ -1.57
CUS1YMR240C GTR1Q00582 310 aa5.26□□□□□ -1.57
CUS1YMR240C MRPL13Q02204 264 aa5.26□□□□□ -1.57
CUS1YMR240C EFR3Q03653 782 aaKnown RBP5.26□□□□□ -1.57
CUS1YMR240C SSM4P40318 1319 aa5.26□□□□□ -1.57
CUS1YMR240C CAP1P28495 268 aaKnown RBP5.25□□□□□ -1.57
CUS1YMR240C ELF1P36053 145 aa5.25□□□□□ -1.57
CUS1YMR240C SET3P36124 751 aa5.25□□□□□ -1.57
CUS1YMR240C YHR097CP38809 366 aaKnown RBP5.25□□□□□ -1.57
CUS1YMR240C ARG2P40360 574 aa5.25□□□□□ -1.57
CUS1YMR240C IMA1P53051 589 aa5.25□□□□□ -1.57
CUS1YMR240C SMX3P54999 86 aaPredicted RBP5.25□□□□□ -1.57
CUS1YMR240C VPS64Q03944 604 aa5.25□□□□□ -1.57
CUS1YMR240C ARA2Q04212 335 aa5.25□□□□□ -1.57
CUS1YMR240C BIK1P11709 440 aa5.24□□□□□ -1.57
CUS1YMR240C NCP1P16603 691 aaKnown RBP5.24□□□□□ -1.57
CUS1YMR240C VPS34P22543 875 aa5.24□□□□□ -1.57
CUS1YMR240C CLB4P24871 460 aa5.24□□□□□ -1.57
CUS1YMR240C APL3P38065 1025 aa5.24□□□□□ -1.57
CUS1YMR240C YBR138CP38277 524 aa5.24□□□□□ -1.57
CUS1YMR240C NPR3P38742 1146 aa5.24□□□□□ -1.57
CUS1YMR240C PCL5P38794 229 aa5.24□□□□□ -1.57
CUS1YMR240C VID27P40157 782 aa5.24□□□□□ -1.57
CUS1YMR240C NDC80P40460 691 aa5.24□□□□□ -1.57
CUS1YMR240C CAB2P40506 365 aa5.24□□□□□ -1.57
CUS1YMR240C COS12P53053 380 aa5.24□□□□□ -1.57
CUS1YMR240C DIP5P53388 608 aa5.24□□□□□ -1.57
CUS1YMR240C SUN4P53616 420 aa5.24□□□□□ -1.57
CUS1YMR240C SNF12P53628 566 aa5.24□□□□□ -1.57
CUS1YMR240C UFO1Q04511 668 aa5.24□□□□□ -1.57
CUS1YMR240C SSP2Q08646 371 aa5.24□□□□□ -1.57
CUS1YMR240C BMS1Q08965 1183 aaKnown RBP5.24□□□□□ -1.57
CUS1YMR240C RKI1Q12189 258 aa5.24□□□□□ -1.57
CUS1YMR240C CTT1P06115 562 aa5.23□□□□□ -1.57
CUS1YMR240C ADE3P07245 946 aaKnown RBP5.23□□□□□ -1.57
CUS1YMR240C NUC1P08466 329 aa5.23□□□□□ -1.57
CUS1YMR240C UBC1P21734 215 aaKnown RBP5.23□□□□□ -1.57
CUS1YMR240C RIT1P23796 513 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 134.2 ms