RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO2, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO2	YMR183C	BEM4	P39011	633 aa		4.28	□□□□□ -1.72
SSO2	YMR183C	VPS8	P39702	1274 aa		4.28	□□□□□ -1.72
SSO2	YMR183C	RPS0B	P46654	252 aa	Known RBP	4.28	□□□□□ -1.72
SSO2	YMR183C	APM1	Q00776	475 aa	Predicted RBP	4.28	□□□□□ -1.72
SSO2	YMR183C	YLR352W	Q06479	807 aa		4.28	□□□□□ -1.72
SSO2	YMR183C	PSK2	Q08217	1101 aa		4.28	□□□□□ -1.72
SSO2	YMR183C	BNR1	P40450	1375 aa		4.27	□□□□□ -1.73
SSO2	YMR183C	RPN13	O13563	156 aa		4.27	□□□□□ -1.73
SSO2	YMR183C	ABF1	P14164	731 aa		4.27	□□□□□ -1.73
SSO2	YMR183C	ADY2	P25613	283 aa		4.27	□□□□□ -1.73
SSO2	YMR183C	NUP120	P35729	1037 aa		4.27	□□□□□ -1.73
SSO2	YMR183C	YKL050C	P35736	922 aa		4.27	□□□□□ -1.73
SSO2	YMR183C	CCT5	P40413	562 aa	Known RBP	4.27	□□□□□ -1.73
SSO2	YMR183C	CNM67	P53865	581 aa	Known RBP	4.27	□□□□□ -1.73
SSO2	YMR183C	PTA1	Q01329	785 aa	Predicted RBP	4.27	□□□□□ -1.73
SSO2	YMR183C	ERO1	Q03103	563 aa		4.27	□□□□□ -1.73
SSO2	YMR183C	YHM2	Q04013	314 aa		4.27	□□□□□ -1.73
SSO2	YMR183C	ARO10	Q06408	635 aa		4.27	□□□□□ -1.73
SSO2	YMR183C	CHS5	Q12114	671 aa	Known RBP	4.27	□□□□□ -1.73
SSO2	YMR183C	POM34	Q12445	299 aa		4.27	□□□□□ -1.73
SSO2	YMR183C	ERG20	P08524	352 aa	Known RBP	4.26	□□□□□ -1.73
SSO2	YMR183C	DAL5	P15365	543 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	SPO11	P23179	398 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	FUB1	P25659	250 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	PET127	P32606	800 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	YPT7	P32939	208 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	SER1	P33330	395 aa	Known RBP	4.26	□□□□□ -1.73
SSO2	YMR183C	PXA2	P34230	853 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	PEX5	P35056	612 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	SET3	P36124	751 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	YKR075C	P36155	307 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	YEL020C	P39994	560 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	FAF1	P40546	346 aa	Predicted RBP	4.26	□□□□□ -1.73
SSO2	YMR183C	IMO32	P53219	342 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	SDH5	Q08230	162 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	VHS3	Q08438	674 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	ENT1	Q12518	454 aa		4.26	□□□□□ -1.73
SSO2	YMR183C	MON2	P48563	1636 aa	Predicted RBP	4.25	□□□□□ -1.73
SSO2	YMR183C	RPS21A	P0C0V8	87 aa	Known RBP	4.25	□□□□□ -1.73
SSO2	YMR183C	MRP7	P12687	371 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	FRS1	P15624	595 aa	Known RBP	4.25	□□□□□ -1.73
SSO2	YMR183C	SAN1	P22470	610 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	FEN2	P25621	512 aa	Known RBP	4.25	□□□□□ -1.73
SSO2	YMR183C	MSH1	P25846	959 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	PET309	P32522	965 aa	Predicted RBP	4.25	□□□□□ -1.73
SSO2	YMR183C	FLO10	P36170	1169 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	APE4	P38821	490 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	RAD26	P40352	1085 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	BFA1	P47113	574 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	SGM1	P47166	707 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	RNR4	P49723	345 aa	Known RBP	4.25	□□□□□ -1.73
SSO2	YMR183C	YGR151C	P53287	111 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	CEG1	Q01159	459 aa	Predicted RBP	4.25	□□□□□ -1.73
SSO2	YMR183C	RCF1	Q03713	159 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	VPS36	Q06696	566 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	VPS5	Q92331	675 aa		4.25	□□□□□ -1.73
SSO2	YMR183C	FUR1	P18562	216 aa	Known RBP	4.24	□□□□□ -1.73
SSO2	YMR183C	KIN82	P25341	720 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	IMG2	P25642	146 aa	Predicted RBP	4.24	□□□□□ -1.73
SSO2	YMR183C	CDC60	P26637	1090 aa	Known RBP	4.24	□□□□□ -1.73
SSO2	YMR183C	VMA8	P32610	256 aa	Known RBP	4.24	□□□□□ -1.73
SSO2	YMR183C	PEX2	P32800	271 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	GMH1	P36125	273 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	PPE1	P38796	400 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	SAW1	P39735	261 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	YIL077C	P40508	320 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	BIT61	P47041	543 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	MPS3	P47069	682 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	ASK10	P48361	1146 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	TEP1	P53916	434 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	MOT3	P54785	490 aa	Known RBP	4.24	□□□□□ -1.73
SSO2	YMR183C	EIS1	Q05050	843 aa	Known RBP	4.24	□□□□□ -1.73
SSO2	YMR183C	CIA1	Q05583	330 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	YDL086W	Q07505	273 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	BMS1	Q08965	1183 aa	Known RBP	4.24	□□□□□ -1.73
SSO2	YMR183C	NUR1	Q12066	484 aa		4.24	□□□□□ -1.73
SSO2	YMR183C	SPT7	P35177	1332 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	SEC15	P22224	910 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	PGS1	P25578	521 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	VPH1	P32563	840 aa	Known RBP	4.23	□□□□□ -1.73
SSO2	YMR183C	OAF3	P36023	863 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	MUD2	P36084	527 aa	Known RBP	4.23	□□□□□ -1.73
SSO2	YMR183C	CTP1	P38152	299 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	RKM3	P38222	552 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	HXT6	P39003	570 aa	Known RBP	4.23	□□□□□ -1.73
SSO2	YMR183C	HXT7	P39004	570 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	KAP123	P40069	1113 aa	Known RBP	4.23	□□□□□ -1.73
SSO2	YMR183C	YFR016C	P43597	1233 aa	Known RBP	4.23	□□□□□ -1.73
SSO2	YMR183C	RFX1	P48743	811 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	HOL1	P53389	586 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	YMR210W	Q03649	449 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	HLR1	Q04429	423 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	VBA4	Q04602	768 aa	Known RBP	4.23	□□□□□ -1.73
SSO2	YMR183C	COQ11	Q05892	277 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	YLR407W	Q06070	228 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	SPN1	Q06505	410 aa	Predicted RBP	4.23	□□□□□ -1.73
SSO2	YMR183C	YFT2	Q06676	274 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	HFI1	Q12060	488 aa		4.23	□□□□□ -1.73
SSO2	YMR183C	RPS21B	Q3E754	87 aa	Known RBP	4.23	□□□□□ -1.73
SSO2	YMR183C	APM4	Q99186	491 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms