RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C SAP4P53036 818 aa4.54□□□□□ -1.68
VPS20YMR077C TIM50Q02776 476 aa4.54□□□□□ -1.68
VPS20YMR077C YLR111WQ12528 110 aa4.54□□□□□ -1.68
VPS20YMR077C SEC3P33332 1336 aaKnown RBP4.53□□□□□ -1.68
VPS20YMR077C MGM1P32266 881 aa4.53□□□□□ -1.68
VPS20YMR077C TDA3P38758 523 aa4.53□□□□□ -1.68
VPS20YMR077C TDA10P42938 290 aa4.53□□□□□ -1.68
VPS20YMR077C NOP15P53927 220 aaPredicted RBP4.53□□□□□ -1.68
VPS20YMR077C AIM41Q12032 185 aa4.53□□□□□ -1.68
VPS20YMR077C GCS1P35197 352 aa4.52□□□□□ -1.69
VPS20YMR077C CCL1P37366 393 aa4.52□□□□□ -1.69
VPS20YMR077C CDS1P38221 457 aa4.52□□□□□ -1.69
VPS20YMR077C DUN1P39009 513 aa4.52□□□□□ -1.69
VPS20YMR077C WAR1Q03631 944 aa4.52□□□□□ -1.69
VPS20YMR077C YMR124WP39523 943 aaKnown RBP4.51□□□□□ -1.69
VPS20YMR077C YIL092WP40497 633 aa4.51□□□□□ -1.69
VPS20YMR077C PRM2P40534 656 aa4.51□□□□□ -1.69
VPS20YMR077C OSW7P43611 510 aa4.51□□□□□ -1.69
VPS20YMR077C YNL193WP53870 558 aa4.51□□□□□ -1.69
VPS20YMR077C USA1Q03714 838 aa4.51□□□□□ -1.69
VPS20YMR077C OCA5P38738 679 aa4.5□□□□□ -1.69
VPS20YMR077C MGS1P40151 587 aa4.5□□□□□ -1.69
VPS20YMR077C YIL024CP40543 189 aa4.5□□□□□ -1.69
VPS20YMR077C CFD1P40558 293 aa4.5□□□□□ -1.69
VPS20YMR077C IES1P43579 692 aa4.5□□□□□ -1.69
VPS20YMR077C TPO3Q06451 622 aa4.5□□□□□ -1.69
VPS20YMR077C HER1Q12276 1246 aa4.5□□□□□ -1.69
VPS20YMR077C YOR111WQ99210 232 aa4.5□□□□□ -1.69
VPS20YMR077C BI2P03873 423 aa4.49□□□□□ -1.69
VPS20YMR077C YMR085WP0CF18 432 aa4.49□□□□□ -1.69
VPS20YMR077C YPT10P38146 199 aa4.49□□□□□ -1.69
VPS20YMR077C ARR3Q06598 404 aa4.49□□□□□ -1.69
VPS20YMR077C TUF1P02992 437 aaKnown RBP4.48□□□□□ -1.69
VPS20YMR077C YAT2P40017 923 aa4.48□□□□□ -1.69
VPS20YMR077C LRO1P40345 661 aa4.48□□□□□ -1.69
VPS20YMR077C MAF1P41910 395 aa4.48□□□□□ -1.69
VPS20YMR077C SAE2P46946 345 aa4.48□□□□□ -1.69
VPS20YMR077C TFB2Q02939 513 aa4.48□□□□□ -1.69
VPS20YMR077C YER190C-BP0CX94 160 aa4.47□□□□□ -1.69
VPS20YMR077C YEL077W-AP0CX95 160 aa4.47□□□□□ -1.69
VPS20YMR077C YGR296C-BP0CX96 160 aa4.47□□□□□ -1.69
VPS20YMR077C YPL283W-BP0CX97 160 aa4.47□□□□□ -1.69
VPS20YMR077C YPR204C-AP0CX98 160 aa4.47□□□□□ -1.69
VPS20YMR077C CKB2P38930 258 aa4.47□□□□□ -1.69
VPS20YMR077C IRC7P43623 340 aa4.47□□□□□ -1.69
VPS20YMR077C YPL071CQ02864 156 aa4.47□□□□□ -1.69
VPS20YMR077C YCG1Q06680 1035 aa4.47□□□□□ -1.69
VPS20YMR077C BUD7Q08754 746 aa4.47□□□□□ -1.69
VPS20YMR077C AAC1P04710 309 aa4.46□□□□□ -1.7
VPS20YMR077C OAF1P39720 1047 aaPredicted RBP4.46□□□□□ -1.7
VPS20YMR077C COP1P53622 1201 aaKnown RBP4.46□□□□□ -1.7
VPS20YMR077C GIS2P53849 153 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
VPS20YMR077C SEC65P29478 273 aa4.45□□□□□ -1.7
VPS20YMR077C ENP2P48234 707 aaKnown RBP4.45□□□□□ -1.7
VPS20YMR077C YNL058CP53947 316 aa4.45□□□□□ -1.7
VPS20YMR077C HRD3Q05787 833 aa4.45□□□□□ -1.7
VPS20YMR077C SRL1Q08673 210 aa4.45□□□□□ -1.7
VPS20YMR077C ACO1P19414 778 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
VPS20YMR077C YJU2P28320 278 aaPredicted RBP4.44□□□□□ -1.7
VPS20YMR077C YJL193WP39542 402 aa4.44□□□□□ -1.7
VPS20YMR077C SDA1P53313 767 aaKnown RBP4.44□□□□□ -1.7
VPS20YMR077C PCL8Q08966 492 aa4.44□□□□□ -1.7
VPS20YMR077C AIM44Q99299 758 aa4.44□□□□□ -1.7
VPS20YMR077C ATO2P32907 282 aa4.43□□□□□ -1.7
VPS20YMR077C EHT1P38295 451 aa4.43□□□□□ -1.7
VPS20YMR077C YHR033WP38690 423 aa4.43□□□□□ -1.7
VPS20YMR077C AHA1Q12449 350 aaKnown RBP4.43□□□□□ -1.7
VPS20YMR077C GLN4P13188 809 aaKnown RBP4.42□□□□□ -1.7
VPS20YMR077C VPS33P20795 691 aa4.42□□□□□ -1.7
VPS20YMR077C MTC7P32633 139 aa4.42□□□□□ -1.7
VPS20YMR077C YGR153WP48238 217 aa4.42□□□□□ -1.7
VPS20YMR077C YDL183CP48569 320 aa4.42□□□□□ -1.7
VPS20YMR077C CRT10Q08226 957 aa4.42□□□□□ -1.7
VPS20YMR077C YCP4P25349 247 aaKnown RBP4.41□□□□□ -1.7
VPS20YMR077C COQ3P27680 312 aa4.41□□□□□ -1.7
VPS20YMR077C MF(ALPHA)2P32435 120 aa4.41□□□□□ -1.7
VPS20YMR077C YJR096WP47137 282 aa4.41□□□□□ -1.7
VPS20YMR077C RPS21BQ3E754 87 aaKnown RBP4.41□□□□□ -1.7
VPS20YMR077C CET1O13297 549 aaPredicted RBP4.4□□□□□ -1.71
VPS20YMR077C YEL076C-AP0CX16 216 aa4.4□□□□□ -1.71
VPS20YMR077C YLR464WP0CX17 216 aa4.4□□□□□ -1.71
VPS20YMR077C HMG2P12684 1045 aa4.4□□□□□ -1.71
VPS20YMR077C AIM17P23180 465 aaKnown RBP4.4□□□□□ -1.71
VPS20YMR077C FLO5P38894 1075 aa4.4□□□□□ -1.71
VPS20YMR077C HXT6P39003 570 aaKnown RBP4.4□□□□□ -1.71
VPS20YMR077C HXT7P39004 570 aa4.4□□□□□ -1.71
VPS20YMR077C YEL076CP39971 216 aa4.4□□□□□ -1.71
VPS20YMR077C RPL15BP54780 204 aaPredicted RBP4.4□□□□□ -1.71
VPS20YMR077C SNA4Q07549 140 aa4.4□□□□□ -1.71
VPS20YMR077C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
VPS20YMR077C APM4Q99186 491 aa4.4□□□□□ -1.71
VPS20YMR077C SFP1P32432 683 aa4.39□□□□□ -1.71
VPS20YMR077C OAF3P36023 863 aa4.39□□□□□ -1.71
VPS20YMR077C MDV1P47025 714 aa4.39□□□□□ -1.71
VPS20YMR077C LYS20P48570 428 aaKnown RBP4.39□□□□□ -1.71
VPS20YMR077C CYK3Q07533 885 aa4.39□□□□□ -1.71
VPS20YMR077C HFI1Q12060 488 aa4.39□□□□□ -1.71
VPS20YMR077C YPT1P01123 206 aaKnown RBP4.38□□□□□ -1.71
VPS20YMR077C YPK1P12688 680 aaKnown RBP4.38□□□□□ -1.71
VPS20YMR077C PRP19P32523 503 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms