RNA–Protein interactions for RNA: YML116W

ATR1, Transcript of Multidrug efflux pump of the major facilitator superfamily, yeast

Gene ATR1, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATR1	YML116W	RPS0B	P46654	252 aa	Known RBP	5.8	□□□□□ -1.48
ATR1	YML116W	ERO1	Q03103	563 aa		5.8	□□□□□ -1.48
ATR1	YML116W	TAF11	Q04226	346 aa		5.8	□□□□□ -1.48
ATR1	YML116W	YLR407W	Q06070	228 aa		5.8	□□□□□ -1.48
ATR1	YML116W	RRG1	Q12167	365 aa	Predicted RBP	5.8	□□□□□ -1.48
ATR1	YML116W	RPO41	P13433	1351 aa	Known RBP	5.79	□□□□□ -1.48
ATR1	YML116W	AUS1	Q08409	1394 aa		5.79	□□□□□ -1.48
ATR1	YML116W	RPS9A	O13516	197 aa	Known RBP	5.79	□□□□□ -1.48
ATR1	YML116W	FUR1	P18562	216 aa	Known RBP	5.79	□□□□□ -1.48
ATR1	YML116W	YKL050C	P35736	922 aa		5.79	□□□□□ -1.48
ATR1	YML116W	SDS22	P36047	338 aa		5.79	□□□□□ -1.48
ATR1	YML116W	TPA1	P40032	644 aa	Known RBP	5.79	□□□□□ -1.48
ATR1	YML116W	RIC1	P40395	1056 aa		5.79	□□□□□ -1.48
ATR1	YML116W	BFA1	P47113	574 aa		5.79	□□□□□ -1.48
ATR1	YML116W	MRPL19	P53875	158 aa		5.79	□□□□□ -1.48
ATR1	YML116W	GSF2	Q04697	403 aa	Known RBP	5.79	□□□□□ -1.48
ATR1	YML116W	HAL9	Q12180	1030 aa		5.79	□□□□□ -1.48
ATR1	YML116W	SCM3	Q12334	223 aa		5.79	□□□□□ -1.48
ATR1	YML116W	MHP1	P43638	1398 aa		5.78	□□□□□ -1.48
ATR1	YML116W	UBC1	P21734	215 aa	Known RBP	5.78	□□□□□ -1.48
ATR1	YML116W	PGS1	P25578	521 aa		5.78	□□□□□ -1.48
ATR1	YML116W	CMK1	P27466	446 aa	Known RBP	5.78	□□□□□ -1.48
ATR1	YML116W	YBR138C	P38277	524 aa		5.78	□□□□□ -1.48
ATR1	YML116W	BEM4	P39011	633 aa		5.78	□□□□□ -1.48
ATR1	YML116W	MSC2	Q03455	724 aa		5.78	□□□□□ -1.48
ATR1	YML116W	PDS5	Q04264	1277 aa		5.78	□□□□□ -1.48
ATR1	YML116W	YLR287C	Q05881	355 aa		5.78	□□□□□ -1.48
ATR1	YML116W	THI21	Q08975	551 aa		5.78	□□□□□ -1.48
ATR1	YML116W	SIR4	P11978	1358 aa		5.78	□□□□□ -1.48
ATR1	YML116W	YEL076C-A	P0CX16	216 aa		5.77	□□□□□ -1.48
ATR1	YML116W	YLR464W	P0CX17	216 aa		5.77	□□□□□ -1.48
ATR1	YML116W	CBP3	P21560	335 aa		5.77	□□□□□ -1.48
ATR1	YML116W	RAD16	P31244	790 aa		5.77	□□□□□ -1.48
ATR1	YML116W	NOP4	P37838	685 aa	Known RBP	5.77	□□□□□ -1.48
ATR1	YML116W	SRP68	P38687	599 aa	Known RBP	5.77	□□□□□ -1.48
ATR1	YML116W	YEL076C	P39971	216 aa		5.77	□□□□□ -1.48
ATR1	YML116W	CBK1	P53894	756 aa		5.77	□□□□□ -1.48
ATR1	YML116W	YKR011C	Q02209	353 aa		5.77	□□□□□ -1.48
ATR1	YML116W	YPL277C	Q08989	487 aa		5.77	□□□□□ -1.48
ATR1	YML116W	TAH18	Q12181	623 aa		5.77	□□□□□ -1.48
ATR1	YML116W	RPS17A	P02407	136 aa	Known RBP	5.77	□□□□□ -1.49
ATR1	YML116W	VAS1	P07806	1104 aa	Known RBP	5.77	□□□□□ -1.49
ATR1	YML116W	CDC16	P09798	840 aa		5.77	□□□□□ -1.49
ATR1	YML116W	NAT1	P12945	854 aa	Known RBP	5.77	□□□□□ -1.49
ATR1	YML116W	RPS17B	P14127	136 aa	Known RBP	5.77	□□□□□ -1.49
ATR1	YML116W	MCM3	P24279	971 aa	Known RBP	5.77	□□□□□ -1.49
ATR1	YML116W	SET3	P36124	751 aa		5.77	□□□□□ -1.49
ATR1	YML116W	POA1	P38218	177 aa		5.77	□□□□□ -1.49
ATR1	YML116W	STT3	P39007	718 aa	Known RBP	5.77	□□□□□ -1.49
ATR1	YML116W	IRC6	P43615	237 aa		5.77	□□□□□ -1.49
ATR1	YML116W	MPP10	P47083	593 aa	Known RBP	5.77	□□□□□ -1.49
ATR1	YML116W	NSE5	Q03718	556 aa		5.77	□□□□□ -1.49
ATR1	YML116W	SYF1	Q04048	859 aa	Predicted RBP	5.77	□□□□□ -1.49
ATR1	YML116W	SIZ1	Q04195	904 aa		5.77	□□□□□ -1.49
ATR1	YML116W	YPS7	Q06325	596 aa		5.77	□□□□□ -1.49
ATR1	YML116W	MED7	Q08278	222 aa		5.77	□□□□□ -1.49
ATR1	YML116W	PHO5	P00635	467 aa		5.76	□□□□□ -1.49
ATR1	YML116W	SWI4	P25302	1093 aa	Known RBP	5.76	□□□□□ -1.49
ATR1	YML116W	RPC82	P32349	654 aa		5.76	□□□□□ -1.49
ATR1	YML116W	PEX5	P35056	612 aa		5.76	□□□□□ -1.49
ATR1	YML116W	TOS1	P38288	455 aa		5.76	□□□□□ -1.49
ATR1	YML116W	YER010C	P40011	234 aa		5.76	□□□□□ -1.49
ATR1	YML116W	PSF2	P40359	213 aa		5.76	□□□□□ -1.49
ATR1	YML116W	LYS14	P40971	790 aa		5.76	□□□□□ -1.49
ATR1	YML116W	ORC3	P54790	616 aa		5.76	□□□□□ -1.49
ATR1	YML116W	RSM24	Q03976	319 aa		5.76	□□□□□ -1.49
ATR1	YML116W	SNO4	Q04902	237 aa		5.76	□□□□□ -1.49
ATR1	YML116W	HSP33	Q08914	237 aa	Known RBP	5.76	□□□□□ -1.49
ATR1	YML116W	HSP32	Q08992	237 aa		5.76	□□□□□ -1.49
ATR1	YML116W	UTP10	P42945	1769 aa	Known RBP	5.75	□□□□□ -1.49
ATR1	YML116W	SEM1	O94742	89 aa		5.75	□□□□□ -1.49
ATR1	YML116W	KIN2	P13186	1147 aa	Known RBP	5.75	□□□□□ -1.49
ATR1	YML116W	CLB4	P24871	460 aa		5.75	□□□□□ -1.49
ATR1	YML116W	VPH1	P32563	840 aa	Known RBP	5.75	□□□□□ -1.49
ATR1	YML116W	SRP101	P32916	621 aa		5.75	□□□□□ -1.49
ATR1	YML116W	RPT3	P33298	428 aa	Known RBP	5.75	□□□□□ -1.49
ATR1	YML116W	PXA2	P34230	853 aa		5.75	□□□□□ -1.49
ATR1	YML116W	MAD2	P40958	196 aa		5.75	□□□□□ -1.49
ATR1	YML116W	EAF6	P47128	113 aa		5.75	□□□□□ -1.49
ATR1	YML116W	YGR016W	P53209	190 aa		5.75	□□□□□ -1.49
ATR1	YML116W	MFB1	Q04922	465 aa		5.75	□□□□□ -1.49
ATR1	YML116W	CDA1	Q06702	301 aa		5.75	□□□□□ -1.49
ATR1	YML116W	DBP10	Q12389	995 aa	Known RBP	5.75	□□□□□ -1.49
ATR1	YML116W	CMP2	P14747	604 aa		5.74	□□□□□ -1.49
ATR1	YML116W	IMG2	P25642	146 aa	Predicted RBP	5.74	□□□□□ -1.49
ATR1	YML116W	DGR2	P32330	852 aa		5.74	□□□□□ -1.49
ATR1	YML116W	DPH2	P32461	534 aa		5.74	□□□□□ -1.49
ATR1	YML116W	TYE7	P33122	291 aa	Predicted RBP	5.74	□□□□□ -1.49
ATR1	YML116W	AKL1	P38080	1108 aa	Known RBP	5.74	□□□□□ -1.49
ATR1	YML116W	PES4	P39684	611 aa		5.74	□□□□□ -1.49
ATR1	YML116W	CTF18	P49956	741 aa		5.74	□□□□□ -1.49
ATR1	YML116W	YGR250C	P53316	781 aa	Known RBP	5.74	□□□□□ -1.49
ATR1	YML116W	RCF1	Q03713	159 aa		5.74	□□□□□ -1.49
ATR1	YML116W	SSL1	Q04673	461 aa	Predicted RBP	5.74	□□□□□ -1.49
ATR1	YML116W	UTP21	Q06078	939 aa	Predicted RBP	5.74	□□□□□ -1.49
ATR1	YML116W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
ATR1	YML116W	RVB2	Q12464	471 aa	Known RBP	5.74	□□□□□ -1.49
ATR1	YML116W	SPT7	P35177	1332 aa		5.74	□□□□□ -1.49
ATR1	YML116W	HSP82	P02829	709 aa	Known RBP	5.74	□□□□□ -1.49
ATR1	YML116W	POL3	P15436	1097 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms