RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W BCK1Q01389 1478 aa4.3□□□□□ -1.72
SEN1YLR430W RVS161P25343 265 aaKnown RBP4.3□□□□□ -1.72
SEN1YLR430W YDR089WP38966 869 aa4.3□□□□□ -1.72
SEN1YLR430W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SEN1YLR430W YPL034WQ03083 165 aa4.3□□□□□ -1.72
SEN1YLR430W RPN4Q03465 531 aa4.3□□□□□ -1.72
SEN1YLR430W FEX1Q08913 375 aa4.3□□□□□ -1.72
SEN1YLR430W SSF2Q12153 453 aaPredicted RBP4.3□□□□□ -1.72
SEN1YLR430W AVL9Q12500 764 aa4.3□□□□□ -1.72
SEN1YLR430W CPR3P25719 182 aa4.3□□□□□ -1.72
SEN1YLR430W ACH1P32316 526 aa4.3□□□□□ -1.72
SEN1YLR430W STB6P36085 766 aa4.3□□□□□ -1.72
SEN1YLR430W UTP30P36144 274 aaKnown RBP4.3□□□□□ -1.72
SEN1YLR430W MEF2P39677 819 aa4.3□□□□□ -1.72
SEN1YLR430W RSC4Q02206 625 aa4.3□□□□□ -1.72
SEN1YLR430W YDR476CQ03362 224 aa4.3□□□□□ -1.72
SEN1YLR430W MRP2P10663 115 aaPredicted RBP4.3□□□□□ -1.72
SEN1YLR430W GBP2P25555 427 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SEN1YLR430W COQ8P27697 501 aa4.3□□□□□ -1.72
SEN1YLR430W CYM1P32898 989 aa4.3□□□□□ -1.72
SEN1YLR430W ARA1P38115 344 aa4.3□□□□□ -1.72
SEN1YLR430W UTP8P53276 713 aaKnown RBP4.3□□□□□ -1.72
SEN1YLR430W ALO1P54783 526 aaKnown RBP4.3□□□□□ -1.72
SEN1YLR430W RAP1P11938 827 aa4.3□□□□□ -1.72
SEN1YLR430W CLN3P13365 580 aa4.3□□□□□ -1.72
SEN1YLR430W KRR1P25586 316 aaPredicted RBP4.3□□□□□ -1.72
SEN1YLR430W CMK1P27466 446 aaKnown RBP4.3□□□□□ -1.72
SEN1YLR430W ITR1P30605 584 aa4.3□□□□□ -1.72
SEN1YLR430W RPT1P33299 467 aaKnown RBP4.3□□□□□ -1.72
SEN1YLR430W SET3P36124 751 aa4.3□□□□□ -1.72
SEN1YLR430W PFF1P38244 976 aa4.3□□□□□ -1.72
SEN1YLR430W ATG7P38862 630 aa4.3□□□□□ -1.72
SEN1YLR430W AIM2P39721 246 aa4.3□□□□□ -1.72
SEN1YLR430W MEP1P40260 492 aa4.3□□□□□ -1.72
SEN1YLR430W CST6P40535 587 aa4.3□□□□□ -1.72
SEN1YLR430W RIM21P48565 533 aa4.3□□□□□ -1.72
SEN1YLR430W YGR021WP53212 290 aa4.3□□□□□ -1.72
SEN1YLR430W CWC2Q12046 339 aaPredicted RBP4.3□□□□□ -1.72
SEN1YLR430W YHR213W-AQ8TGT4 77 aa4.3□□□□□ -1.72
SEN1YLR430W RPN13O13563 156 aa4.3□□□□□ -1.72
SEN1YLR430W RAM1P22007 431 aa4.3□□□□□ -1.72
SEN1YLR430W PMT2P31382 759 aa4.3□□□□□ -1.72
SEN1YLR430W NIC96P34077 839 aa4.3□□□□□ -1.72
SEN1YLR430W YHL008CP38750 627 aa4.3□□□□□ -1.72
SEN1YLR430W YJL181WP46987 611 aa4.3□□□□□ -1.72
SEN1YLR430W MET13P53128 600 aa4.3□□□□□ -1.72
SEN1YLR430W NMA2P53204 395 aa4.3□□□□□ -1.72
SEN1YLR430W MUK1Q02866 612 aa4.3□□□□□ -1.72
SEN1YLR430W RPN9Q04062 393 aaKnown RBP4.3□□□□□ -1.72
SEN1YLR430W HOP09932 586 aa4.29□□□□□ -1.72
SEN1YLR430W PEX3P28795 441 aa4.29□□□□□ -1.72
SEN1YLR430W SSE2P32590 693 aaKnown RBP4.29□□□□□ -1.72
SEN1YLR430W ECM2P38241 364 aaKnown RBP4.29□□□□□ -1.72
SEN1YLR430W POP7P38291 140 aa4.29□□□□□ -1.72
SEN1YLR430W PFK26P40433 827 aaKnown RBP4.29□□□□□ -1.72
SEN1YLR430W SPO77Q06134 477 aa4.29□□□□□ -1.72
SEN1YLR430W BRE4Q07660 1125 aa4.29□□□□□ -1.72
SEN1YLR430W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
SEN1YLR430W SNX3Q08826 162 aaKnown RBP4.29□□□□□ -1.72
SEN1YLR430W HMG2P12684 1045 aa4.29□□□□□ -1.72
SEN1YLR430W IRC6P43615 237 aa4.29□□□□□ -1.72
SEN1YLR430W RAD17P48581 401 aa4.29□□□□□ -1.72
SEN1YLR430W RMI1Q02685 241 aa4.29□□□□□ -1.72
SEN1YLR430W BNA7Q04066 261 aa4.29□□□□□ -1.72
SEN1YLR430W THP3Q12049 470 aaKnown RBP4.29□□□□□ -1.72
SEN1YLR430W RGR1P19263 1082 aa4.29□□□□□ -1.72
SEN1YLR430W VMA6P32366 345 aaKnown RBP4.29□□□□□ -1.72
SEN1YLR430W TAF14P35189 244 aa4.29□□□□□ -1.72
SEN1YLR430W SPC97P38863 823 aa4.29□□□□□ -1.72
SEN1YLR430W YGR125WP53273 1036 aa4.29□□□□□ -1.72
SEN1YLR430W VTA1Q06263 330 aa4.29□□□□□ -1.72
SEN1YLR430W GIC2Q06648 383 aa4.29□□□□□ -1.72
SEN1YLR430W PGA3Q12746 312 aaKnown RBP4.29□□□□□ -1.72
SEN1YLR430W CDC24P11433 854 aaPredicted RBP4.29□□□□□ -1.72
SEN1YLR430W HNM1P19807 563 aa4.29□□□□□ -1.72
SEN1YLR430W PWP2P25635 923 aaKnown RBP4.29□□□□□ -1.72
SEN1YLR430W RAD27P26793 382 aa4.29□□□□□ -1.72
SEN1YLR430W YBL028CP38202 106 aa4.29□□□□□ -1.72
SEN1YLR430W SDH8P38345 138 aa4.29□□□□□ -1.72
SEN1YLR430W YHR078WP38799 552 aa4.29□□□□□ -1.72
SEN1YLR430W ERP2P39704 215 aa4.29□□□□□ -1.72
SEN1YLR430W SSO2P39926 295 aa4.29□□□□□ -1.72
SEN1YLR430W STL1P39932 569 aa4.29□□□□□ -1.72
SEN1YLR430W COS4P43542 379 aa4.29□□□□□ -1.72
SEN1YLR430W COS5P47187 383 aa4.29□□□□□ -1.72
SEN1YLR430W COS1P53822 381 aa4.29□□□□□ -1.72
SEN1YLR430W SED5Q01590 340 aa4.29□□□□□ -1.72
SEN1YLR430W YMR187CQ03236 431 aa4.29□□□□□ -1.72
SEN1YLR430W SSP2Q08646 371 aa4.29□□□□□ -1.72
SEN1YLR430W YOR131CQ12486 218 aa4.29□□□□□ -1.72
SEN1YLR430W YOS9Q99220 542 aa4.29□□□□□ -1.72
SEN1YLR430W YJR098CP47139 656 aa4.29□□□□□ -1.72
SEN1YLR430W DAK1P54838 584 aaKnown RBP4.29□□□□□ -1.72
SEN1YLR430W YDL124WQ07551 312 aaKnown RBP4.29□□□□□ -1.72
SEN1YLR430W COS7Q07788 383 aa4.29□□□□□ -1.72
SEN1YLR430W TRE1Q08919 783 aa4.29□□□□□ -1.72
SEN1YLR430W ADF1Q2V2Q1 113 aa4.29□□□□□ -1.72
SEN1YLR430W BCH2P36122 765 aa4.28□□□□□ -1.72
SEN1YLR430W RTT105P40063 208 aa4.28□□□□□ -1.72
SEN1YLR430W CSC1Q06538 782 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms