RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	LIP5	P32875	414 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	DHR2	P36009	735 aa	Predicted RBP	1.65	□□□□□ -2.15
SMC4	YLR086W	BCD1	P38772	366 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	DUN1	P39009	513 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	NOP16	P40007	231 aa	Known RBP	1.65	□□□□□ -2.15
SMC4	YLR086W	POL31	P46957	487 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	SRB7	P47822	140 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	SPC98	P53540	846 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	ARC35	P53731	342 aa	Known RBP	1.65	□□□□□ -2.15
SMC4	YLR086W	RPS15	Q01855	142 aa	Known RBP	1.65	□□□□□ -2.15
SMC4	YLR086W	ENT2	Q05785	613 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	ISA1	Q07821	250 aa	Predicted RBP	1.65	□□□□□ -2.15
SMC4	YLR086W	FRE5	Q08908	694 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	AIM41	Q12032	185 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	SEM1	O94742	89 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	URA3	P03962	267 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	MIS1	P09440	975 aa	Known RBP	1.65	□□□□□ -2.15
SMC4	YLR086W	YCR015C	P25616	317 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	FEN2	P25621	512 aa	Known RBP	1.65	□□□□□ -2.15
SMC4	YLR086W	CTS1	P29029	562 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	CHS7	P38843	316 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	CRG1	P38892	291 aa	RIP-Chip data	1.65	□□□□□ -2.15	not detected
SMC4	YLR086W	TAF1	P46677	1066 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	MUP1	P50276	574 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	MTL1	P53214	551 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	RCO1	Q04779	684 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	BLS1	Q06071	122 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	VAM6	Q07468	1049 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	BUD21	Q08492	214 aa	Predicted RBP	1.65	□□□□□ -2.15
SMC4	YLR086W	TAF3	Q12297	353 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	YKL033W-A	Q86ZR7	236 aa		1.65	□□□□□ -2.15
SMC4	YLR086W	TOP2	P06786	1428 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	PSY4	P38193	441 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	EXO84	P38261	753 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	REV7	P38927	245 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	YJL193W	P39542	402 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	UBP5	P39944	805 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	EAF5	P39995	279 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	SCS2	P40075	244 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	KHA1	P40309	873 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	GCV2	P49095	1034 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	GTF1	P53260	183 aa	Predicted RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	SNF12	P53628	566 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	SMX3	P54999	86 aa	Predicted RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	YCG1	Q06680	1035 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	SSP2	Q08646	371 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	CHS5	Q12114	671 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	CPA2	P03965	1118 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	GAS1	P22146	559 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	RER1	P25560	188 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	YCR061W	P25639	631 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	MSH1	P25846	959 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	TRM2	P33753	639 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	NOP4	P37838	685 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	APM3	P38153	483 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	UBS1	P38290	277 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	1.64	□□□□□ -2.15	not detected
SMC4	YLR086W	KAP123	P40069	1113 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	PUG1	P40100	303 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	SIP4	P46954	829 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	ESF2	P53743	316 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	DAK1	P54838	584 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	MRPL13	Q02204	264 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	TRS31	Q03337	283 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	HOS1	Q12214	470 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	LEU2	P04173	364 aa	Predicted RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	YEF3	P16521	1044 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	TOD6	P34219	525 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	SDH8	P38345	138 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	RIC1	P40395	1056 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	MAD3	P47074	515 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	BNA1	P47096	177 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	YGR054W	P53235	642 aa	Known RBP	1.64	□□□□□ -2.15
SMC4	YLR086W	BAG7	Q12128	409 aa		1.64	□□□□□ -2.15
SMC4	YLR086W	PHO5	P00635	467 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	RPL19A	P0CX82	189 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	RPL19B	P0CX83	189 aa	Predicted RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	ABF1	P14164	731 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	ARG1	P22768	420 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	COS111	P38308	924 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	YHL017W	P38745	532 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	YSH1	Q06224	779 aa	Predicted RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	SDH5	Q08230	162 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	NUR1	Q12066	484 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	YOL087C	Q99247	1116 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	CHO2	P05374	869 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	NCP1	P16603	691 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	THR1	P17423	357 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	HCM1	P25364	564 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	YKL222C	P35995	705 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	1.63	□□□□□ -2.15	not detected
SMC4	YLR086W	YEL025C	P39991	1188 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	FKH2	P41813	862 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	ARC1	P46672	376 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	COS12	P53053	380 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	INA17	Q02888	182 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	CSR1	Q06705	408 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	ZRT2	Q12436	422 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	STH1	P32597	1359 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	AAC1	P04710	309 aa		1.63	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 76.2 ms