RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeastyeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIC1YLR039C MCM10P32354 571 aa2.41□□□□□ -2.02
RIC1YLR039C SSP120P39931 234 aaKnown RBP2.41□□□□□ -2.02
RIC1YLR039C KHA1P40309 873 aa2.41□□□□□ -2.02
RIC1YLR039C YGR054WP53235 642 aaKnown RBP2.41□□□□□ -2.02
RIC1YLR039C FHN1P53279 174 aa2.41□□□□□ -2.02
RIC1YLR039C FDC1Q03034 503 aa2.41□□□□□ -2.02
RIC1YLR039C ADY4Q05955 493 aa2.41□□□□□ -2.02
RIC1YLR039C AAD4Q07747 329 aa2.41□□□□□ -2.02
RIC1YLR039C PCD1Q12524 340 aa2.41□□□□□ -2.02
RIC1YLR039C SIR3P06701 978 aa2.4□□□□□ -2.03
RIC1YLR039C ALG7P07286 448 aa2.4□□□□□ -2.03
RIC1YLR039C THR1P17423 357 aaKnown RBP2.4□□□□□ -2.03
RIC1YLR039C RIT1P23796 513 aa2.4□□□□□ -2.03
RIC1YLR039C RPS7AP26786 190 aaKnown RBP2.4□□□□□ -2.03
RIC1YLR039C DPB3P27344 201 aa2.4□□□□□ -2.03
RIC1YLR039C CTS1P29029 562 aa2.4□□□□□ -2.03
RIC1YLR039C PRE2P30656 287 aaKnown RBP2.4□□□□□ -2.03
RIC1YLR039C SSH4P32343 579 aa2.4□□□□□ -2.03
RIC1YLR039C PPS1P38148 807 aa2.4□□□□□ -2.03
RIC1YLR039C PSY4P38193 441 aa2.4□□□□□ -2.03
RIC1YLR039C TRM8Q12009 286 aa2.4□□□□□ -2.03
RIC1YLR039C NTO1Q12311 748 aa2.4□□□□□ -2.03
RIC1YLR039C YKL033W-AQ86ZR7 236 aa2.4□□□□□ -2.03
RIC1YLR039C YOL087CQ99247 1116 aa2.4□□□□□ -2.03
RIC1YLR039C SNF1P06782 633 aaKnown RBP2.4□□□□□ -2.03
RIC1YLR039C CLB4P24871 460 aa2.4□□□□□ -2.03
RIC1YLR039C YCL049CP25577 312 aa2.4□□□□□ -2.03
RIC1YLR039C ELM1P32801 640 aa2.4□□□□□ -2.03
RIC1YLR039C ELF1P36053 145 aa2.4□□□□□ -2.03
RIC1YLR039C MRPL7P36519 292 aa2.4□□□□□ -2.03
RIC1YLR039C UBS1P38290 277 aa2.4□□□□□ -2.03
RIC1YLR039C LRO1P40345 661 aa2.4□□□□□ -2.03
RIC1YLR039C MEP3P53390 489 aa2.4□□□□□ -2.03
RIC1YLR039C KIN4Q01919 800 aa2.4□□□□□ -2.03
RIC1YLR039C TRI1Q05024 226 aa2.4□□□□□ -2.03
RIC1YLR039C HOF1Q05080 669 aa2.4□□□□□ -2.03
RIC1YLR039C ENT2Q05785 613 aa2.4□□□□□ -2.03
RIC1YLR039C IWR1Q07532 353 aaPredicted RBP2.4□□□□□ -2.03
RIC1YLR039C USV1Q12132 391 aa2.4□□□□□ -2.03
RIC1YLR039C GUK1P15454 187 aaKnown RBP2.39□□□□□ -2.03
RIC1YLR039C HCM1P25364 564 aa2.39□□□□□ -2.03
RIC1YLR039C DEF1P35732 738 aaKnown RBP2.39□□□□□ -2.03
RIC1YLR039C YLF2P38746 405 aa2.39□□□□□ -2.03
RIC1YLR039C PIG2P40187 538 aa2.39□□□□□ -2.03
RIC1YLR039C TAF1P46677 1066 aa2.39□□□□□ -2.03
RIC1YLR039C COS12P53053 380 aa2.39□□□□□ -2.03
RIC1YLR039C TRS31Q03337 283 aa2.39□□□□□ -2.03
RIC1YLR039C IZH3Q07959 543 aa2.39□□□□□ -2.03
RIC1YLR039C AIM41Q12032 185 aa2.39□□□□□ -2.03
RIC1YLR039C NUC1P08466 329 aa2.39□□□□□ -2.03
RIC1YLR039C MTF2P10849 440 aa2.39□□□□□ -2.03
RIC1YLR039C TAF5P38129 798 aa2.39□□□□□ -2.03
RIC1YLR039C SUL1P38359 859 aa2.39□□□□□ -2.03
RIC1YLR039C AXL2P38928 823 aa2.39□□□□□ -2.03
RIC1YLR039C SMK1P41808 388 aa2.39□□□□□ -2.03
RIC1YLR039C IML2P47031 731 aa2.39□□□□□ -2.03
RIC1YLR039C YMR206WQ03695 313 aa2.39□□□□□ -2.03
RIC1YLR039C NEW1Q08972 1196 aaKnown RBP2.39□□□□□ -2.03
RIC1YLR039C YDR056CQ12025 205 aa2.39□□□□□ -2.03
RIC1YLR039C PRP28P23394 588 aa2.39□□□□□ -2.03
RIC1YLR039C FMP52P40008 231 aa2.39□□□□□ -2.03
RIC1YLR039C SNF12P53628 566 aa2.39□□□□□ -2.03
RIC1YLR039C VPS33P20795 691 aa2.38□□□□□ -2.03
RIC1YLR039C ARP2P32381 391 aaKnown RBP2.38□□□□□ -2.03
RIC1YLR039C CTP1P38152 299 aa2.38□□□□□ -2.03
RIC1YLR039C ARB1P40024 610 aaKnown RBP2.38□□□□□ -2.03
RIC1YLR039C VFA1P40080 203 aa2.38□□□□□ -2.03
RIC1YLR039C NMA2P53204 395 aa2.38□□□□□ -2.03
RIC1YLR039C TAM41P53230 385 aa2.38□□□□□ -2.03
RIC1YLR039C MRPL13Q02204 264 aa2.38□□□□□ -2.03
RIC1YLR039C RNT1Q02555 471 aa2.38□□□□□ -2.03
RIC1YLR039C MUK1Q02866 612 aa2.38□□□□□ -2.03
RIC1YLR039C TMA64Q04600 565 aaKnown RBP2.38□□□□□ -2.03
RIC1YLR039C YOL073CQ08232 322 aa2.38□□□□□ -2.03
RIC1YLR039C SSM4P40318 1319 aa2.38□□□□□ -2.03
RIC1YLR039C PPR1P07272 904 aaPredicted RBP2.38□□□□□ -2.03
RIC1YLR039C UBC1P21734 215 aaKnown RBP2.38□□□□□ -2.03
RIC1YLR039C FUB1P25659 250 aa2.38□□□□□ -2.03
RIC1YLR039C PPE1P38796 400 aa2.38□□□□□ -2.03
RIC1YLR039C REV7P38927 245 aa2.38□□□□□ -2.03
RIC1YLR039C NAB3P38996 802 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
RIC1YLR039C PSF2P40359 213 aa2.38□□□□□ -2.03
RIC1YLR039C MNT3P40549 630 aa2.38□□□□□ -2.03
RIC1YLR039C EFR3Q03653 782 aaKnown RBP2.38□□□□□ -2.03
RIC1YLR039C CRD1Q07560 283 aa2.38□□□□□ -2.03
RIC1YLR039C AIM39Q08223 395 aa2.38□□□□□ -2.03
RIC1YLR039C SUL2Q12325 893 aa2.38□□□□□ -2.03
RIC1YLR039C YJL193WP39542 402 aa2.37□□□□□ -2.03
RIC1YLR039C ERP2P39704 215 aa2.37□□□□□ -2.03
RIC1YLR039C DPH1P40487 425 aaKnown RBP2.37□□□□□ -2.03
RIC1YLR039C TEL2P53038 688 aa2.37□□□□□ -2.03
RIC1YLR039C YGR151CP53287 111 aa2.37□□□□□ -2.03
RIC1YLR039C DIP5P53388 608 aa2.37□□□□□ -2.03
RIC1YLR039C VID22Q05934 901 aa2.37□□□□□ -2.03
RIC1YLR039C STP3Q05937 343 aa2.37□□□□□ -2.03
RIC1YLR039C COG4Q06096 861 aa2.37□□□□□ -2.03
RIC1YLR039C YDL086WQ07505 273 aa2.37□□□□□ -2.03
RIC1YLR039C KOG1P38873 1557 aa2.37□□□□□ -2.03
RIC1YLR039C MIS1P09440 975 aaKnown RBP2.37□□□□□ -2.03
RIC1YLR039C BET2P20133 325 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms