RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C ASI2P53895 289 aa5.01□□□□□ -1.61
CAF4YKR036C MTG1Q03151 367 aaPredicted RBP5.01□□□□□ -1.61
CAF4YKR036C COQ9Q05779 260 aa5.01□□□□□ -1.61
CAF4YKR036C SYO1Q07395 620 aa5.01□□□□□ -1.61
CAF4YKR036C MSC6Q08818 692 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C NCR1Q12200 1170 aa5.01□□□□□ -1.61
CAF4YKR036C MNL2Q12205 849 aa5.01□□□□□ -1.61
CAF4YKR036C HEM15P16622 393 aa5□□□□□ -1.61
CAF4YKR036C SEC2P17065 759 aa5□□□□□ -1.61
CAF4YKR036C RRT12P25381 491 aa5□□□□□ -1.61
CAF4YKR036C RPC53P25441 422 aa5□□□□□ -1.61
CAF4YKR036C RPS5P26783 225 aaKnown RBP5□□□□□ -1.61
CAF4YKR036C MCM5P29496 775 aaKnown RBP5□□□□□ -1.61
CAF4YKR036C SUV3P32580 737 aa5□□□□□ -1.61
CAF4YKR036C PBP2P38151 413 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
CAF4YKR036C UBP9P39967 754 aa5□□□□□ -1.61
CAF4YKR036C SDS3P40505 327 aa5□□□□□ -1.61
CAF4YKR036C MAM33P40513 266 aa5□□□□□ -1.61
CAF4YKR036C RLP7P40693 322 aaKnown RBP5□□□□□ -1.61
CAF4YKR036C THI6P41835 540 aa5□□□□□ -1.61
CAF4YKR036C PSP1P50896 841 aaKnown RBP5□□□□□ -1.61
CAF4YKR036C YNL115CP53925 644 aa5□□□□□ -1.61
CAF4YKR036C RPL22BP56628 122 aaKnown RBP5□□□□□ -1.61
CAF4YKR036C SED5Q01590 340 aa5□□□□□ -1.61
CAF4YKR036C SYH1Q02875 849 aaKnown RBP5□□□□□ -1.61
CAF4YKR036C COX20Q04935 205 aa5□□□□□ -1.61
CAF4YKR036C YEH2Q07950 538 aa5□□□□□ -1.61
CAF4YKR036C SNX3Q08826 162 aaKnown RBP5□□□□□ -1.61
CAF4YKR036C YPL216WQ08964 1102 aa5□□□□□ -1.61
CAF4YKR036C AHC1Q12433 566 aa5□□□□□ -1.61
CAF4YKR036C LSO2Q3E772 92 aaKnown RBP5□□□□□ -1.61
CAF4YKR036C VCX1Q99385 411 aa5□□□□□ -1.61
CAF4YKR036C YPR117WQ06116 2489 aa5□□□□□ -1.61
CAF4YKR036C SAM1P10659 382 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C HMG1P12683 1054 aa4.99□□□□□ -1.61
CAF4YKR036C HSP60P19882 572 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C ACE2P21192 770 aa4.99□□□□□ -1.61
CAF4YKR036C GBP2P25555 427 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
CAF4YKR036C GPI10P30777 616 aa4.99□□□□□ -1.61
CAF4YKR036C PEP7P32609 515 aa4.99□□□□□ -1.61
CAF4YKR036C XRS2P33301 854 aa4.99□□□□□ -1.61
CAF4YKR036C KTR2P33550 425 aa4.99□□□□□ -1.61
CAF4YKR036C BCH2P36122 765 aa4.99□□□□□ -1.61
CAF4YKR036C PDX3P38075 228 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C APD1P38281 316 aa4.99□□□□□ -1.61
CAF4YKR036C TIF5P38431 405 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C VPS29P38759 282 aa4.99□□□□□ -1.61
CAF4YKR036C SSP1P38871 571 aa4.99□□□□□ -1.61
CAF4YKR036C PRK1P40494 810 aa4.99□□□□□ -1.61
CAF4YKR036C ULP2P40537 1034 aaPredicted RBP4.99□□□□□ -1.61
CAF4YKR036C SKP2P42843 763 aa4.99□□□□□ -1.61
CAF4YKR036C RTC4P53850 401 aa4.99□□□□□ -1.61
CAF4YKR036C DAK1P54838 584 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C RPS15Q01855 142 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C GDE1Q02979 1223 aa4.99□□□□□ -1.61
CAF4YKR036C SLD5Q03406 294 aa4.99□□□□□ -1.61
CAF4YKR036C TFC6Q06339 672 aa4.99□□□□□ -1.61
CAF4YKR036C ADY3Q07732 790 aa4.99□□□□□ -1.61
CAF4YKR036C TMA46Q12000 345 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C NTO1Q12311 748 aa4.99□□□□□ -1.61
CAF4YKR036C APM4Q99186 491 aa4.99□□□□□ -1.61
CAF4YKR036C YLR462WO13556 202 aa4.99□□□□□ -1.61
CAF4YKR036C CHO2P05374 869 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C TUB1P09733 447 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C HMG2P12684 1045 aa4.99□□□□□ -1.61
CAF4YKR036C CAD1P24813 409 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C NPP1P25353 742 aa4.99□□□□□ -1.61
CAF4YKR036C PAT1P25644 796 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C DGR2P32330 852 aa4.99□□□□□ -1.61
CAF4YKR036C TGL1P34163 548 aa4.99□□□□□ -1.61
CAF4YKR036C SIP2P34164 415 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C NTR2P36118 322 aaPredicted RBP4.99□□□□□ -1.61
CAF4YKR036C GIP1P38229 639 aa4.99□□□□□ -1.61
CAF4YKR036C PHO88P38264 188 aaPredicted RBP4.99□□□□□ -1.61
CAF4YKR036C YHL049CP38722 271 aa4.99□□□□□ -1.61
CAF4YKR036C APE4P38821 490 aa4.99□□□□□ -1.61
CAF4YKR036C YEL075CP39972 122 aa4.99□□□□□ -1.61
CAF4YKR036C YER189WP40104 122 aa4.99□□□□□ -1.61
CAF4YKR036C YFL064CP43540 174 aa4.99□□□□□ -1.61
CAF4YKR036C FMP32P43557 207 aa4.99□□□□□ -1.61
CAF4YKR036C FAR7P43592 221 aa4.99□□□□□ -1.61
CAF4YKR036C IRC5P43610 853 aa4.99□□□□□ -1.61
CAF4YKR036C MET12P46151 657 aa4.99□□□□□ -1.61
CAF4YKR036C SNX4P47057 423 aa4.99□□□□□ -1.61
CAF4YKR036C BIR1P47134 954 aa4.99□□□□□ -1.61
CAF4YKR036C IMD3P50095 523 aaKnown RBP4.99□□□□□ -1.61
CAF4YKR036C UBA2P52488 636 aa4.99□□□□□ -1.61
CAF4YKR036C NMA2P53204 395 aa4.99□□□□□ -1.61
CAF4YKR036C ABZ2Q03266 374 aa4.99□□□□□ -1.61
CAF4YKR036C YDR278CQ05612 105 aa4.99□□□□□ -1.61
CAF4YKR036C PEX15Q08215 383 aa4.99□□□□□ -1.61
CAF4YKR036C RCN2Q12044 265 aa4.99□□□□□ -1.61
CAF4YKR036C ATG29Q12092 213 aa4.99□□□□□ -1.61
CAF4YKR036C EMP46Q12396 444 aa4.99□□□□□ -1.61
CAF4YKR036C CEX1Q12453 761 aa4.99□□□□□ -1.61
CAF4YKR036C YBL111CQ3E7Y5 667 aa4.99□□□□□ -1.61
CAF4YKR036C FOB1O13329 566 aa4.98□□□□□ -1.61
CAF4YKR036C MF(ALPHA)1P01149 165 aa4.98□□□□□ -1.61
CAF4YKR036C HIP1P06775 603 aa4.98□□□□□ -1.61
CAF4YKR036C MIP1P15801 1254 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms