RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W MSS1P32559 526 aaPredicted RBP3.12□□□□□ -1.91
PEP8YJL053W PET127P32606 800 aa3.12□□□□□ -1.91
PEP8YJL053W AKL1P38080 1108 aaKnown RBP3.12□□□□□ -1.91
PEP8YJL053W BEM4P39011 633 aa3.12□□□□□ -1.91
PEP8YJL053W NUG1P40010 520 aaKnown RBP3.12□□□□□ -1.91
PEP8YJL053W DUG1P43616 481 aaKnown RBP3.12□□□□□ -1.91
PEP8YJL053W ECM9Q02202 377 aa3.12□□□□□ -1.91
PEP8YJL053W ISA1Q07821 250 aaPredicted RBP3.12□□□□□ -1.91
PEP8YJL053W RPL7BQ12213 244 aaKnown RBP3.12□□□□□ -1.91
PEP8YJL053W TMA17Q12513 150 aa3.12□□□□□ -1.91
PEP8YJL053W APM4Q99186 491 aa3.12□□□□□ -1.91
PEP8YJL053W LEU2P04173 364 aaPredicted RBP3.11□□□□□ -1.91
PEP8YJL053W SWI6P09959 803 aa3.11□□□□□ -1.91
PEP8YJL053W AQY1P0CD91 305 aa3.11□□□□□ -1.91
PEP8YJL053W AEP2P22136 580 aa3.11□□□□□ -1.91
PEP8YJL053W PRP22P24384 1145 aaKnown RBP3.11□□□□□ -1.91
PEP8YJL053W IMG2P25642 146 aaPredicted RBP3.11□□□□□ -1.91
PEP8YJL053W OAF3P36023 863 aa3.11□□□□□ -1.91
PEP8YJL053W FLO5P38894 1075 aa3.11□□□□□ -1.91
PEP8YJL053W RNR4P49723 345 aaKnown RBP3.11□□□□□ -1.91
PEP8YJL053W PPN1Q04119 674 aa3.11□□□□□ -1.91
PEP8YJL053W VBA4Q04602 768 aaKnown RBP3.11□□□□□ -1.91
PEP8YJL053W IZH3Q07959 543 aa3.11□□□□□ -1.91
PEP8YJL053W VHS3Q08438 674 aa3.11□□□□□ -1.91
PEP8YJL053W HFI1Q12060 488 aa3.11□□□□□ -1.91
PEP8YJL053W RPS17AP02407 136 aaKnown RBP3.1□□□□□ -1.91
PEP8YJL053W RPS9BP05755 195 aaKnown RBP3.1□□□□□ -1.91
PEP8YJL053W RPS17BP14127 136 aaKnown RBP3.1□□□□□ -1.91
PEP8YJL053W KIN82P25341 720 aa3.1□□□□□ -1.91
PEP8YJL053W YKU70P32807 602 aa3.1□□□□□ -1.91
PEP8YJL053W YBR071WP38243 211 aa3.1□□□□□ -1.91
PEP8YJL053W DUN1P39009 513 aa3.1□□□□□ -1.91
PEP8YJL053W EMP65P40085 556 aa3.1□□□□□ -1.91
PEP8YJL053W YLR407WQ06070 228 aa3.1□□□□□ -1.91
PEP8YJL053W YTH1Q06102 208 aaPredicted RBP3.1□□□□□ -1.91
PEP8YJL053W SNA4Q07549 140 aa3.1□□□□□ -1.91
PEP8YJL053W YPR027CQ12079 277 aa3.1□□□□□ -1.91
PEP8YJL053W YMR084WA2P2R3 262 aa3.09□□□□□ -1.91
PEP8YJL053W KAR1P11927 433 aa3.09□□□□□ -1.91
PEP8YJL053W FRS1P15624 595 aaKnown RBP3.09□□□□□ -1.91
PEP8YJL053W TOM20P35180 183 aa3.09□□□□□ -1.91
PEP8YJL053W HXT6P39003 570 aaKnown RBP3.09□□□□□ -1.91
PEP8YJL053W HXT7P39004 570 aa3.09□□□□□ -1.91
PEP8YJL053W YMR124WP39523 943 aaKnown RBP3.09□□□□□ -1.91
PEP8YJL053W NOP15P53927 220 aaPredicted RBP3.09□□□□□ -1.91
PEP8YJL053W AAT1Q01802 451 aa3.09□□□□□ -1.91
PEP8YJL053W SKY1Q03656 742 aa3.09□□□□□ -1.91
PEP8YJL053W SRL1Q08673 210 aa3.09□□□□□ -1.91
PEP8YJL053W RPS21BQ3E754 87 aaKnown RBP3.09□□□□□ -1.91
PEP8YJL053W OPT1P40897 799 aa3.08□□□□□ -1.92
PEP8YJL053W PXA1P41909 870 aa3.08□□□□□ -1.92
PEP8YJL053W NIT2P47016 307 aa3.08□□□□□ -1.92
PEP8YJL053W PEX14P53112 341 aa3.08□□□□□ -1.92
PEP8YJL053W SPC105P53148 917 aa3.08□□□□□ -1.92
PEP8YJL053W SPO1P53541 631 aa3.08□□□□□ -1.92
PEP8YJL053W NSE5Q03718 556 aa3.08□□□□□ -1.92
PEP8YJL053W YDL073WQ07454 984 aa3.08□□□□□ -1.92
PEP8YJL053W CPA2P03965 1118 aaKnown RBP3.07□□□□□ -1.92
PEP8YJL053W GLN4P13188 809 aaKnown RBP3.07□□□□□ -1.92
PEP8YJL053W YPT7P32939 208 aa3.07□□□□□ -1.92
PEP8YJL053W PEA2P40091 420 aa3.07□□□□□ -1.92
PEP8YJL053W GPP2P40106 250 aaKnown RBP3.07□□□□□ -1.92
PEP8YJL053W YIL024CP40543 189 aa3.07□□□□□ -1.92
PEP8YJL053W VID28P40547 921 aa3.07□□□□□ -1.92
PEP8YJL053W BIT61P47041 543 aa3.07□□□□□ -1.92
PEP8YJL053W YJR120WP47157 116 aa3.07□□□□□ -1.92
PEP8YJL053W SLD3P53135 668 aa3.07□□□□□ -1.92
PEP8YJL053W FOL1P53848 824 aa3.07□□□□□ -1.92
PEP8YJL053W COG6P53959 839 aa3.07□□□□□ -1.92
PEP8YJL053W RCR2Q03446 210 aaKnown RBP3.07□□□□□ -1.92
PEP8YJL053W PEX15Q08215 383 aa3.07□□□□□ -1.92
PEP8YJL053W RPS21AP0C0V8 87 aaKnown RBP3.06□□□□□ -1.92
PEP8YJL053W COX11P19516 300 aaKnown RBP3.06□□□□□ -1.92
PEP8YJL053W DGR2P32330 852 aa3.06□□□□□ -1.92
PEP8YJL053W SEC3P33332 1336 aaKnown RBP3.06□□□□□ -1.92
PEP8YJL053W GRX7P38068 203 aa3.06□□□□□ -1.92
PEP8YJL053W EXO1P39875 702 aa3.06□□□□□ -1.92
PEP8YJL053W IES1P43579 692 aa3.06□□□□□ -1.92
PEP8YJL053W TAF4P50105 388 aa3.06□□□□□ -1.92
PEP8YJL053W HOL1P53389 586 aa3.06□□□□□ -1.92
PEP8YJL053W YPS7Q06325 596 aa3.06□□□□□ -1.92
PEP8YJL053W BSP1Q06604 576 aa3.06□□□□□ -1.92
PEP8YJL053W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
PEP8YJL053W YMR085WP0CF18 432 aa3.05□□□□□ -1.92
PEP8YJL053W ACO1P19414 778 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
PEP8YJL053W IME1P21190 360 aa3.05□□□□□ -1.92
PEP8YJL053W ATO2P32907 282 aa3.05□□□□□ -1.92
PEP8YJL053W TFC4P33339 1025 aa3.05□□□□□ -1.92
PEP8YJL053W FAT1P38225 669 aa3.05□□□□□ -1.92
PEP8YJL053W SRP68P38687 599 aaKnown RBP3.05□□□□□ -1.92
PEP8YJL053W BST1P43571 1029 aa3.05□□□□□ -1.92
PEP8YJL053W YIP4P53093 235 aa3.05□□□□□ -1.92
PEP8YJL053W COQ6P53318 479 aa3.05□□□□□ -1.92
PEP8YJL053W MFM1Q02783 413 aa3.05□□□□□ -1.92
PEP8YJL053W PHM6Q05637 104 aa3.05□□□□□ -1.92
PEP8YJL053W STP4Q07351 490 aa3.05□□□□□ -1.92
PEP8YJL053W TMA7Q3E764 64 aaKnown RBP3.05□□□□□ -1.92
PEP8YJL053W PHO2P07269 559 aa3.04□□□□□ -1.92
PEP8YJL053W WHI2P12611 486 aa3.04□□□□□ -1.92
PEP8YJL053W DAL3P32459 195 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 136.4 ms