RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C STP4Q07351 490 aa3.34□□□□□ -1.87
TPM2YIL138C YLR001CQ07895 862 aa3.34□□□□□ -1.87
TPM2YIL138C CRC1Q12289 327 aa3.34□□□□□ -1.87
TPM2YIL138C RDL1Q12305 139 aaKnown RBP3.34□□□□□ -1.87
TPM2YIL138C RPS17AP02407 136 aaKnown RBP3.33□□□□□ -1.88
TPM2YIL138C RPS17BP14127 136 aaKnown RBP3.33□□□□□ -1.88
TPM2YIL138C CAP1P28495 268 aaKnown RBP3.33□□□□□ -1.88
TPM2YIL138C CRG1P38892 291 aaRIP-Chip data3.33□□□□□ -1.88not detected
TPM2YIL138C YEL025CP39991 1188 aa3.33□□□□□ -1.88
TPM2YIL138C FTR1P40088 404 aa3.33□□□□□ -1.88
TPM2YIL138C YFL015CP43578 164 aa3.33□□□□□ -1.88
TPM2YIL138C RET2P43621 546 aa3.33□□□□□ -1.88
TPM2YIL138C TAF4P50105 388 aa3.33□□□□□ -1.88
TPM2YIL138C SPN1Q06505 410 aaPredicted RBP3.33□□□□□ -1.88
TPM2YIL138C ADR1P07248 1323 aa3.33□□□□□ -1.88
TPM2YIL138C YPR089WO13585 888 aa3.32□□□□□ -1.88
TPM2YIL138C DNM1P54861 757 aa3.32□□□□□ -1.88
TPM2YIL138C TIM50Q02776 476 aa3.32□□□□□ -1.88
TPM2YIL138C MRPL1Q04599 285 aa3.32□□□□□ -1.88
TPM2YIL138C YLR111WQ12528 110 aa3.32□□□□□ -1.88
TPM2YIL138C RPL8AP17076 256 aaKnown RBP3.31□□□□□ -1.88
TPM2YIL138C YAP1P19880 650 aaKnown RBP3.31□□□□□ -1.88
TPM2YIL138C RNR3P21672 869 aaKnown RBP3.31□□□□□ -1.88
TPM2YIL138C CCL1P37366 393 aa3.31□□□□□ -1.88
TPM2YIL138C TDA3P38758 523 aa3.31□□□□□ -1.88
TPM2YIL138C DUN1P39009 513 aa3.31□□□□□ -1.88
TPM2YIL138C CCT4P39078 528 aaKnown RBP3.31□□□□□ -1.88
TPM2YIL138C TDA10P42938 290 aa3.31□□□□□ -1.88
TPM2YIL138C HLJ1P48353 224 aa3.31□□□□□ -1.88
TPM2YIL138C SAP4P53036 818 aa3.31□□□□□ -1.88
TPM2YIL138C NOP15P53927 220 aaPredicted RBP3.31□□□□□ -1.88
TPM2YIL138C AIM41Q12032 185 aa3.31□□□□□ -1.88
TPM2YIL138C SEC3P33332 1336 aaKnown RBP3.3□□□□□ -1.88
TPM2YIL138C MGM1P32266 881 aa3.3□□□□□ -1.88
TPM2YIL138C CDS1P38221 457 aa3.3□□□□□ -1.88
TPM2YIL138C IES1P43579 692 aa3.3□□□□□ -1.88
TPM2YIL138C SDA1P53313 767 aaKnown RBP3.3□□□□□ -1.88
TPM2YIL138C YNL193WP53870 558 aa3.3□□□□□ -1.88
TPM2YIL138C WAR1Q03631 944 aa3.3□□□□□ -1.88
TPM2YIL138C USA1Q03714 838 aa3.3□□□□□ -1.88
TPM2YIL138C NUP145P49687 1317 aa3.29□□□□□ -1.88
TPM2YIL138C YMR124WP39523 943 aaKnown RBP3.29□□□□□ -1.88
TPM2YIL138C MGS1P40151 587 aa3.29□□□□□ -1.88
TPM2YIL138C YIL092WP40497 633 aa3.29□□□□□ -1.88
TPM2YIL138C PRM2P40534 656 aa3.29□□□□□ -1.88
TPM2YIL138C YOR111WQ99210 232 aa3.29□□□□□ -1.88
TPM2YIL138C TUF1P02992 437 aaKnown RBP3.28□□□□□ -1.88
TPM2YIL138C GCS1P35197 352 aa3.28□□□□□ -1.88
TPM2YIL138C YPT10P38146 199 aa3.28□□□□□ -1.88
TPM2YIL138C CFD1P40558 293 aa3.28□□□□□ -1.88
TPM2YIL138C TPO3Q06451 622 aa3.28□□□□□ -1.88
TPM2YIL138C ARR3Q06598 404 aa3.28□□□□□ -1.88
TPM2YIL138C BI2P03873 423 aa3.27□□□□□ -1.89
TPM2YIL138C CKB2P38930 258 aa3.27□□□□□ -1.89
TPM2YIL138C YAT2P40017 923 aa3.27□□□□□ -1.89
TPM2YIL138C LRO1P40345 661 aa3.27□□□□□ -1.89
TPM2YIL138C YIL024CP40543 189 aa3.27□□□□□ -1.89
TPM2YIL138C SAE2P46946 345 aa3.27□□□□□ -1.89
TPM2YIL138C YNR029CP53729 429 aaKnown RBP3.27□□□□□ -1.89
TPM2YIL138C YCG1Q06680 1035 aa3.27□□□□□ -1.89
TPM2YIL138C THI73Q07904 523 aa3.27□□□□□ -1.89
TPM2YIL138C HER1Q12276 1246 aa3.27□□□□□ -1.89
TPM2YIL138C AAC1P04710 309 aa3.26□□□□□ -1.89
TPM2YIL138C YMR085WP0CF18 432 aa3.26□□□□□ -1.89
TPM2YIL138C YER190C-BP0CX94 160 aa3.26□□□□□ -1.89
TPM2YIL138C YEL077W-AP0CX95 160 aa3.26□□□□□ -1.89
TPM2YIL138C YGR296C-BP0CX96 160 aa3.26□□□□□ -1.89
TPM2YIL138C YPL283W-BP0CX97 160 aa3.26□□□□□ -1.89
TPM2YIL138C YPR204C-AP0CX98 160 aa3.26□□□□□ -1.89
TPM2YIL138C SEC65P29478 273 aa3.26□□□□□ -1.89
TPM2YIL138C MAF1P41910 395 aa3.26□□□□□ -1.89
TPM2YIL138C PMT3P47190 753 aa3.26□□□□□ -1.89
TPM2YIL138C ENP2P48234 707 aaKnown RBP3.26□□□□□ -1.89
TPM2YIL138C YGL081WP53156 320 aa3.26□□□□□ -1.89
TPM2YIL138C COP1P53622 1201 aaKnown RBP3.26□□□□□ -1.89
TPM2YIL138C YPL071CQ02864 156 aa3.26□□□□□ -1.89
TPM2YIL138C BUD7Q08754 746 aa3.26□□□□□ -1.89
TPM2YIL138C ACO1P19414 778 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
TPM2YIL138C OAF1P39720 1047 aaPredicted RBP3.25□□□□□ -1.89
TPM2YIL138C YEN1P40028 759 aa3.25□□□□□ -1.89
TPM2YIL138C IRC7P43623 340 aa3.25□□□□□ -1.89
TPM2YIL138C YGR237CP50089 785 aa3.25□□□□□ -1.89
TPM2YIL138C YNL058CP53947 316 aa3.25□□□□□ -1.89
TPM2YIL138C HRD3Q05787 833 aa3.25□□□□□ -1.89
TPM2YIL138C PCL8Q08966 492 aa3.25□□□□□ -1.89
TPM2YIL138C YJU2P28320 278 aaPredicted RBP3.24□□□□□ -1.89
TPM2YIL138C MTC7P32633 139 aa3.24□□□□□ -1.89
TPM2YIL138C EHT1P38295 451 aa3.24□□□□□ -1.89
TPM2YIL138C YHR033WP38690 423 aa3.24□□□□□ -1.89
TPM2YIL138C YJL193WP39542 402 aa3.24□□□□□ -1.89
TPM2YIL138C UME1Q03010 460 aa3.24□□□□□ -1.89
TPM2YIL138C SRL1Q08673 210 aa3.24□□□□□ -1.89
TPM2YIL138C AHA1Q12449 350 aaKnown RBP3.24□□□□□ -1.89
TPM2YIL138C HMG2P12684 1045 aa3.23□□□□□ -1.89
TPM2YIL138C GLN4P13188 809 aaKnown RBP3.23□□□□□ -1.89
TPM2YIL138C VPS33P20795 691 aa3.23□□□□□ -1.89
TPM2YIL138C MF(ALPHA)2P32435 120 aa3.23□□□□□ -1.89
TPM2YIL138C PRP19P32523 503 aaKnown RBP3.23□□□□□ -1.89
TPM2YIL138C ATO2P32907 282 aa3.23□□□□□ -1.89
TPM2YIL138C TYS1P36421 394 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms