RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRM3	YHR031C	PRI2	P20457	528 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	CNA1	P23287	553 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	KIP1	P28742	1111 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	LOS1	P33418	1100 aa	Predicted RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	PMT1	P33775	817 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	STO1	P34160	861 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	RCN1	P36054	211 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	ALG14	P38242	237 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	SDH8	P38345	138 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	FAA3	P39002	694 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	SER3	P40054	469 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	IRC24	P40580	263 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	ALA1	P40825	983 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	HUL4	P40985	892 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	YFH7	P43591	353 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	CNN1	P43618	361 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	MNN11	P46985	422 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	PCL10	P53124	433 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	ERP6	P53198	216 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	UFD2	P54860	961 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	RPM2	Q02773	1202 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	YPL109C	Q02981	657 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	SPC24	Q04477	213 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	OPI10	Q08202	246 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	NTG2	Q08214	380 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	DAS2	Q12084	232 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	VPS15	P22219	1454 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	PSK1	P31374	1356 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	INH1	P01097	85 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
RRM3	YHR031C	SFL1	P20134	766 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	UBC1	P21734	215 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	ZIP1	P31111	875 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	HXT3	P32466	567 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	PRP19	P32523	503 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	DOA4	P32571	926 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	YBL010C	P32788	280 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	SMC1	P32908	1225 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	POP2	P39008	433 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	EMP65	P40085	556 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	YJR061W	P40355	935 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	AGX1	P43567	385 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	SAP4	P53036	818 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	MRM2	P53123	320 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	PGA2	P53903	129 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	ORC4	P54791	529 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	RMI1	Q02685	241 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	ERO1	Q03103	563 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	IVY1	Q04934	453 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	COA4	Q05809	96 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	RGC1	Q06108	1083 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	DIS3	Q08162	1001 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	TIP41	Q12199	356 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	SIR4	P11978	1358 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	YMR084W	A2P2R3	262 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	COQ4	O13525	335 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	IPP1	P00817	287 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	CDC34	P14682	295 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	MRPL33	P20084	86 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	DPB2	P24482	689 aa	Predicted RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	KRE2	P27809	442 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	NIP1	P32497	812 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	TYE7	P33122	291 aa	Predicted RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	CUE2	P36075	443 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	YKL023W	P36103	277 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	KAP104	P38217	918 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	SPP381	P38282	291 aa	Predicted RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	YBR225W	P38321	900 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	SWC5	P38326	303 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	PCF11	P39081	626 aa	Predicted RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	AIM10	P39965	576 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	NOP16	P40007	231 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	UTP7	P40055	554 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	CCT5	P40413	562 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	YIL077C	P40508	320 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	ABM1	P47146	123 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	MAL11	P53048	616 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	KAP114	P53067	1004 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	YNR063W	P53749	607 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	CWC24	P53769	259 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	GTR1	Q00582	310 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	NAN1	Q02931	896 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	HER2	Q03557	464 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	USA1	Q03714	838 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	RPN9	Q04062	393 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	YPD1	Q07688	167 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	NSE1	Q07913	336 aa		3.13	□□□□□ -1.91
RRM3	YHR031C	PUS7	Q08647	676 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	TMA7	Q3E764	64 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	ARO1	P08566	1588 aa	Known RBP	3.13	□□□□□ -1.91
RRM3	YHR031C	CAN1	P04817	590 aa		3.12	□□□□□ -1.91
RRM3	YHR031C	GCD1	P09032	578 aa	Predicted RBP	3.12	□□□□□ -1.91
RRM3	YHR031C	GPA2	P10823	449 aa		3.12	□□□□□ -1.91
RRM3	YHR031C	CKI1	P20485	582 aa		3.12	□□□□□ -1.91
RRM3	YHR031C	NPR1	P22211	790 aa		3.12	□□□□□ -1.91
RRM3	YHR031C	CLB2	P24869	491 aa		3.12	□□□□□ -1.91
RRM3	YHR031C	RVS161	P25343	265 aa	Known RBP	3.12	□□□□□ -1.91
RRM3	YHR031C	URA1	P28272	314 aa	Predicted RBP	3.12	□□□□□ -1.91
RRM3	YHR031C	VMA6	P32366	345 aa	Known RBP	3.12	□□□□□ -1.91
RRM3	YHR031C	SRB4	P32569	687 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms