RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W AIM41Q12032 185 aa2.12□□□□□ -2.07
LCD1YDR499W TGS1Q12052 315 aa2.12□□□□□ -2.07
LCD1YDR499W YAP1P19880 650 aaKnown RBP2.11□□□□□ -2.07
LCD1YDR499W HOP1P20050 605 aa2.11□□□□□ -2.07
LCD1YDR499W LOT5P34234 306 aa2.11□□□□□ -2.07
LCD1YDR499W FAT1P38225 669 aa2.11□□□□□ -2.07
LCD1YDR499W JHD1P40034 492 aa2.11□□□□□ -2.07
LCD1YDR499W VID28P40547 921 aa2.11□□□□□ -2.07
LCD1YDR499W MNT3P40549 630 aa2.11□□□□□ -2.07
LCD1YDR499W OPT1P40897 799 aa2.11□□□□□ -2.07
LCD1YDR499W WAR1Q03631 944 aa2.11□□□□□ -2.07
LCD1YDR499W NSE5Q03718 556 aa2.11□□□□□ -2.07
LCD1YDR499W BSP1Q06604 576 aa2.11□□□□□ -2.07
LCD1YDR499W NOP14Q99207 810 aaKnown RBP2.11□□□□□ -2.07
LCD1YDR499W HXT6P39003 570 aaKnown RBP2.11□□□□□ -2.07
LCD1YDR499W HXT7P39004 570 aa2.11□□□□□ -2.07
LCD1YDR499W IDP3P53982 420 aaKnown RBP2.11□□□□□ -2.07
LCD1YDR499W ECM9Q02202 377 aa2.11□□□□□ -2.07
LCD1YDR499W PCL8Q08966 492 aa2.11□□□□□ -2.07
LCD1YDR499W CRC1Q12289 327 aa2.11□□□□□ -2.07
LCD1YDR499W YLR111WQ12528 110 aa2.11□□□□□ -2.07
LCD1YDR499W YMR085WP0CF18 432 aa2.1□□□□□ -2.07
LCD1YDR499W CAP1P28495 268 aaKnown RBP2.1□□□□□ -2.07
LCD1YDR499W MTC7P32633 139 aa2.1□□□□□ -2.07
LCD1YDR499W OAF3P36023 863 aa2.1□□□□□ -2.07
LCD1YDR499W TYS1P36421 394 aaKnown RBP2.1□□□□□ -2.07
LCD1YDR499W CCL1P37366 393 aa2.1□□□□□ -2.07
LCD1YDR499W YPT10P38146 199 aa2.1□□□□□ -2.07
LCD1YDR499W BRN1P38170 754 aa2.1□□□□□ -2.07
LCD1YDR499W LRO1P40345 661 aa2.1□□□□□ -2.07
LCD1YDR499W PCI8P40512 444 aa2.1□□□□□ -2.07
LCD1YDR499W ARR3Q06598 404 aa2.1□□□□□ -2.07
LCD1YDR499W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
LCD1YDR499W RDL1Q12305 139 aaKnown RBP2.1□□□□□ -2.07
LCD1YDR499W ADR1P07248 1323 aa2.1□□□□□ -2.07
LCD1YDR499W RPS21AP0C0V8 87 aaKnown RBP2.1□□□□□ -2.07
LCD1YDR499W CDC26P14724 124 aa2.1□□□□□ -2.07
LCD1YDR499W GSY2P27472 705 aa2.1□□□□□ -2.07
LCD1YDR499W PPG1P32838 368 aa2.1□□□□□ -2.07
LCD1YDR499W RGT1P32862 1170 aa2.1□□□□□ -2.07
LCD1YDR499W ASK1P35734 292 aa2.1□□□□□ -2.07
LCD1YDR499W HLJ1P48353 224 aa2.1□□□□□ -2.07
LCD1YDR499W YDL183CP48569 320 aa2.1□□□□□ -2.07
LCD1YDR499W YPL071CQ02864 156 aa2.1□□□□□ -2.07
LCD1YDR499W TPO3Q06451 622 aa2.1□□□□□ -2.07
LCD1YDR499W HER1Q12276 1246 aa2.1□□□□□ -2.07
LCD1YDR499W HMG2P12684 1045 aa2.09□□□□□ -2.07
LCD1YDR499W ALG12P53730 551 aa2.09□□□□□ -2.07
LCD1YDR499W PXL1P36166 706 aa2.09□□□□□ -2.08
LCD1YDR499W SPC97P38863 823 aa2.09□□□□□ -2.08
LCD1YDR499W SAE2P46946 345 aa2.09□□□□□ -2.08
LCD1YDR499W DNM1P54861 757 aa2.09□□□□□ -2.08
LCD1YDR499W MTQ2Q03920 221 aaPredicted RBP2.09□□□□□ -2.08
LCD1YDR499W THI73Q07904 523 aa2.09□□□□□ -2.08
LCD1YDR499W HFI1Q12060 488 aa2.09□□□□□ -2.08
LCD1YDR499W AHA1Q12449 350 aaKnown RBP2.09□□□□□ -2.08
LCD1YDR499W PCK1P10963 549 aa2.08□□□□□ -2.08
LCD1YDR499W YPK1P12688 680 aaKnown RBP2.08□□□□□ -2.08
LCD1YDR499W MNN1P39106 762 aa2.08□□□□□ -2.08
LCD1YDR499W YJL193WP39542 402 aa2.08□□□□□ -2.08
LCD1YDR499W YIL024CP40543 189 aa2.08□□□□□ -2.08
LCD1YDR499W TDA10P42938 290 aa2.08□□□□□ -2.08
LCD1YDR499W PTA1Q01329 785 aaPredicted RBP2.08□□□□□ -2.08
LCD1YDR499W USA1Q03714 838 aa2.08□□□□□ -2.08
LCD1YDR499W YTA7P40340 1379 aa2.08□□□□□ -2.08
LCD1YDR499W YPR089WO13585 888 aa2.07□□□□□ -2.08
LCD1YDR499W DGR2P32330 852 aa2.07□□□□□ -2.08
LCD1YDR499W MF(ALPHA)2P32435 120 aa2.07□□□□□ -2.08
LCD1YDR499W RMA1P36001 430 aaKnown RBP2.07□□□□□ -2.08
LCD1YDR499W RRP14P36080 434 aaKnown RBP2.07□□□□□ -2.08
LCD1YDR499W YIL092WP40497 633 aa2.07□□□□□ -2.08
LCD1YDR499W GZF3P42944 551 aaKnown RBP2.07□□□□□ -2.08
LCD1YDR499W RNH70P53331 553 aa2.07□□□□□ -2.08
LCD1YDR499W SQS1P53866 767 aaKnown RBP2.07□□□□□ -2.08
LCD1YDR499W ENT2Q05785 613 aa2.07□□□□□ -2.08
LCD1YDR499W BI2P03873 423 aa2.07□□□□□ -2.08
LCD1YDR499W ACO1P19414 778 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
LCD1YDR499W VPS33P20795 691 aa2.07□□□□□ -2.08
LCD1YDR499W FLO5P38894 1075 aa2.07□□□□□ -2.08
LCD1YDR499W LSC1P53598 329 aaKnown RBP2.07□□□□□ -2.08
LCD1YDR499W HRD3Q05787 833 aa2.07□□□□□ -2.08
LCD1YDR499W SPN1Q06505 410 aaPredicted RBP2.07□□□□□ -2.08
LCD1YDR499W BET2P20133 325 aa2.06□□□□□ -2.08
LCD1YDR499W YJU2P28320 278 aaPredicted RBP2.06□□□□□ -2.08
LCD1YDR499W YMR124WP39523 943 aaKnown RBP2.06□□□□□ -2.08
LCD1YDR499W OAF1P39720 1047 aaPredicted RBP2.06□□□□□ -2.08
LCD1YDR499W FPR4Q06205 392 aaPredicted RBP2.06□□□□□ -2.08
LCD1YDR499W CYK3Q07533 885 aa2.06□□□□□ -2.08
LCD1YDR499W AAC1P04710 309 aa2.06□□□□□ -2.08
LCD1YDR499W HXT4P32467 576 aa2.06□□□□□ -2.08
LCD1YDR499W DSS4P32601 143 aa2.06□□□□□ -2.08
LCD1YDR499W MAF1P41910 395 aa2.06□□□□□ -2.08
LCD1YDR499W MNN11P46985 422 aaKnown RBP2.06□□□□□ -2.08
LCD1YDR499W NEW1Q08972 1196 aaKnown RBP2.06□□□□□ -2.08
LCD1YDR499W YTM1Q12024 460 aaPredicted RBP2.06□□□□□ -2.08
LCD1YDR499W APM4Q99186 491 aa2.06□□□□□ -2.08
LCD1YDR499W AIM44Q99299 758 aa2.06□□□□□ -2.08
LCD1YDR499W GCS1P35197 352 aa2.05□□□□□ -2.08
LCD1YDR499W IRC7P43623 340 aa2.05□□□□□ -2.08
LCD1YDR499W ENP2P48234 707 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 88.4 ms