RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W SKG6P32900 734 aaPredicted RBP6.33□□□□□ -1.4
RPT3YDR394W VHC1P38329 1120 aa6.33□□□□□ -1.4
RPT3YDR394W PCA1P38360 1216 aa6.33□□□□□ -1.4
RPT3YDR394W YMR134WP40207 237 aa6.33□□□□□ -1.4
RPT3YDR394W YIL089WP40500 205 aa6.33□□□□□ -1.4
RPT3YDR394W RPS7BP48164 190 aaKnown RBP6.33□□□□□ -1.4
RPT3YDR394W PSP2P50109 593 aaKnown RBP6.33□□□□□ -1.4
RPT3YDR394W HOP2P53187 214 aa6.33□□□□□ -1.4
RPT3YDR394W YPL034WQ03083 165 aa6.33□□□□□ -1.4
RPT3YDR394W CEF1Q03654 590 aaPredicted RBP6.33□□□□□ -1.4
RPT3YDR394W TRS130Q03660 1102 aa6.33□□□□□ -1.4
RPT3YDR394W USA1Q03714 838 aa6.33□□□□□ -1.4
RPT3YDR394W SXM1Q04175 944 aaKnown RBP6.33□□□□□ -1.4
RPT3YDR394W IVY1Q04934 453 aa6.33□□□□□ -1.4
RPT3YDR394W YDR278CQ05612 105 aa6.33□□□□□ -1.4
RPT3YDR394W PIG1Q06216 648 aa6.33□□□□□ -1.4
RPT3YDR394W SOG2Q08817 791 aa6.33□□□□□ -1.4
RPT3YDR394W TY3A-GQ12173 290 aa6.33□□□□□ -1.4
RPT3YDR394W NCA2Q12374 616 aa6.33□□□□□ -1.4
RPT3YDR394W TRM11Q12463 433 aa6.33□□□□□ -1.4
RPT3YDR394W TY3A-IQ99219 290 aa6.33□□□□□ -1.4
RPT3YDR394W BI2P03873 423 aa6.32□□□□□ -1.4
RPT3YDR394W BI4P03879 638 aa6.32□□□□□ -1.4
RPT3YDR394W POL3P15436 1097 aa6.32□□□□□ -1.4
RPT3YDR394W PUF4P25339 888 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
RPT3YDR394W CDC3P32457 520 aaKnown RBP6.32□□□□□ -1.4
RPT3YDR394W SFA1P32771 386 aa6.32□□□□□ -1.4
RPT3YDR394W SEG2P34250 1132 aa6.32□□□□□ -1.4
RPT3YDR394W CCL1P37366 393 aa6.32□□□□□ -1.4
RPT3YDR394W YMC2P38087 329 aa6.32□□□□□ -1.4
RPT3YDR394W VID24P38263 362 aa6.32□□□□□ -1.4
RPT3YDR394W POP4P38336 279 aa6.32□□□□□ -1.4
RPT3YDR394W DSN1P40568 576 aa6.32□□□□□ -1.4
RPT3YDR394W INP52P50942 1183 aa6.32□□□□□ -1.4
RPT3YDR394W YML6P51998 286 aa6.32□□□□□ -1.4
RPT3YDR394W YML020WQ03722 664 aa6.32□□□□□ -1.4
RPT3YDR394W MSH6Q03834 1242 aa6.32□□□□□ -1.4
RPT3YDR394W ABP140Q08641 628 aaKnown RBP6.32□□□□□ -1.4
RPT3YDR394W MSC6Q08818 692 aaKnown RBP6.32□□□□□ -1.4
RPT3YDR394W BI3Q9ZZW7 517 aa6.32□□□□□ -1.4
RPT3YDR394W GCR1P07261 785 aa6.31□□□□□ -1.4
RPT3YDR394W PRP16P15938 1071 aaPredicted RBP6.31□□□□□ -1.4
RPT3YDR394W SAC7P17121 654 aa6.31□□□□□ -1.4
RPT3YDR394W VMA4P22203 233 aaKnown RBP6.31□□□□□ -1.4
RPT3YDR394W MRPL25P23369 157 aa6.31□□□□□ -1.4
RPT3YDR394W RGT1P32862 1170 aa6.31□□□□□ -1.4
RPT3YDR394W PBP2P38151 413 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
RPT3YDR394W PCM1P38628 557 aaKnown RBP6.31□□□□□ -1.4
RPT3YDR394W SAH1P39954 449 aaKnown RBP6.31□□□□□ -1.4
RPT3YDR394W MRX1P40050 688 aa6.31□□□□□ -1.4
RPT3YDR394W TMN3P40071 706 aa6.31□□□□□ -1.4
RPT3YDR394W HLJ1P48353 224 aa6.31□□□□□ -1.4
RPT3YDR394W MNP1P53163 194 aaPredicted RBP6.31□□□□□ -1.4
RPT3YDR394W NOG2P53742 486 aaKnown RBP6.31□□□□□ -1.4
RPT3YDR394W FAR8Q05040 523 aa6.31□□□□□ -1.4
RPT3YDR394W YPL225WQ08971 146 aaKnown RBP6.31□□□□□ -1.4
RPT3YDR394W ACM1Q08981 209 aa6.31□□□□□ -1.4
RPT3YDR394W GAL10P04397 699 aa6.3□□□□□ -1.4
RPT3YDR394W ASP3-2P0CX77 362 aa6.3□□□□□ -1.4
RPT3YDR394W ASP3-3P0CX78 362 aa6.3□□□□□ -1.4
RPT3YDR394W ASP3-4P0CX79 362 aa6.3□□□□□ -1.4
RPT3YDR394W ASP3-1P0CZ17 362 aa6.3□□□□□ -1.4
RPT3YDR394W HEM15P16622 393 aa6.3□□□□□ -1.4
RPT3YDR394W KAR3P17119 729 aa6.3□□□□□ -1.4
RPT3YDR394W SRV2P17555 526 aaKnown RBP6.3□□□□□ -1.4
RPT3YDR394W AEP2P22136 580 aa6.3□□□□□ -1.4
RPT3YDR394W RRT12P25381 491 aa6.3□□□□□ -1.4
RPT3YDR394W YUR1P26725 428 aa6.3□□□□□ -1.4
RPT3YDR394W PYC2P32327 1180 aaKnown RBP6.3□□□□□ -1.4
RPT3YDR394W NIP1P32497 812 aaKnown RBP6.3□□□□□ -1.4
RPT3YDR394W SMY2P32909 740 aaKnown RBP6.3□□□□□ -1.4
RPT3YDR394W TRM2P33753 639 aa6.3□□□□□ -1.4
RPT3YDR394W MXR1P40029 184 aa6.3□□□□□ -1.4
RPT3YDR394W ARG2P40360 574 aa6.3□□□□□ -1.4
RPT3YDR394W TMA108P40462 946 aa6.3□□□□□ -1.4
RPT3YDR394W SNZ3P43545 298 aa6.3□□□□□ -1.4
RPT3YDR394W ACF4P47129 309 aa6.3□□□□□ -1.4
RPT3YDR394W ARI1P53111 347 aaKnown RBP6.3□□□□□ -1.4
RPT3YDR394W SNZ2P53824 298 aa6.3□□□□□ -1.4
RPT3YDR394W YNL247WP53852 767 aaKnown RBP6.3□□□□□ -1.4
RPT3YDR394W YMR027WQ04371 470 aa6.3□□□□□ -1.4
RPT3YDR394W KAP95Q06142 861 aaKnown RBP6.3□□□□□ -1.4
RPT3YDR394W SHS1Q07657 551 aa6.3□□□□□ -1.4
RPT3YDR394W SDH5Q08230 162 aa6.3□□□□□ -1.4
RPT3YDR394W CIR2Q08822 631 aa6.3□□□□□ -1.4
RPT3YDR394W TY1A-NL1Q12391 440 aaKnown RBP6.3□□□□□ -1.4
RPT3YDR394W ILV2P07342 687 aaKnown RBP6.29□□□□□ -1.4
RPT3YDR394W SBP1P10080 294 aaKnown RBP6.29□□□□□ -1.4
RPT3YDR394W GYP6P32806 458 aa6.29□□□□□ -1.4
RPT3YDR394W SET3P36124 751 aa6.29□□□□□ -1.4
RPT3YDR394W ECM1P39715 212 aa6.29□□□□□ -1.4
RPT3YDR394W PRM6Q04705 352 aa6.29□□□□□ -1.4
RPT3YDR394W THI7Q05998 598 aa6.29□□□□□ -1.4
RPT3YDR394W TDA5Q06417 326 aaKnown RBP6.29□□□□□ -1.4
RPT3YDR394W YDR018CQ12185 396 aa6.29□□□□□ -1.4
RPT3YDR394W GLO4Q12320 285 aa6.29□□□□□ -1.4
RPT3YDR394W RAD10P06838 210 aa6.28□□□□□ -1.4
RPT3YDR394W ARD1P07347 238 aaPredicted RBP6.28□□□□□ -1.4
RPT3YDR394W HVG1P0CE11 249 aa6.28□□□□□ -1.4
RPT3YDR394W WHI2P12611 486 aa6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 81.1 ms