RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	SDS3	P40505	327 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	YDL183C	P48569	320 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	YNR071C	P53757	342 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	TEP1	P53916	434 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	DAK1	P54838	584 aa	Known RBP	5.46	□□□□□ -1.54
NSE3	YDR288W	MFM1	Q02783	413 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	UFO1	Q04511	668 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	TRI1	Q05024	226 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	HIM1	Q06674	414 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	RKI1	Q12189	258 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	DBP10	Q12389	995 aa	Known RBP	5.46	□□□□□ -1.54
NSE3	YDR288W	ARP7	Q12406	477 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	ADH4	P10127	382 aa		5.45	□□□□□ -1.54
NSE3	YDR288W	PHO81	P17442	1178 aa		5.45	□□□□□ -1.54
NSE3	YDR288W	VPS33	P20795	691 aa		5.45	□□□□□ -1.54
NSE3	YDR288W	ARG1	P22768	420 aa		5.45	□□□□□ -1.54
NSE3	YDR288W	BDH2	P39713	417 aa		5.45	□□□□□ -1.54
NSE3	YDR288W	GND2	P53319	492 aa		5.45	□□□□□ -1.54
NSE3	YDR288W	PAP2	P53632	584 aa	Known RBP	5.45	□□□□□ -1.54
NSE3	YDR288W	CEG1	Q01159	459 aa	Predicted RBP	5.45	□□□□□ -1.54
NSE3	YDR288W	VMS1	Q04311	632 aa	Known RBP	5.45	□□□□□ -1.54
NSE3	YDR288W	TMN2	Q04562	672 aa		5.45	□□□□□ -1.54
NSE3	YDR288W	DIN7	Q12086	430 aa		5.45	□□□□□ -1.54
NSE3	YDR288W	LAM4	P38800	1345 aa		5.45	□□□□□ -1.54
NSE3	YDR288W	MSH1	P25846	959 aa		5.44	□□□□□ -1.54
NSE3	YDR288W	SWD1	P39706	426 aa		5.44	□□□□□ -1.54
NSE3	YDR288W	LRO1	P40345	661 aa		5.44	□□□□□ -1.54
NSE3	YDR288W	QRI7	P43122	407 aa		5.44	□□□□□ -1.54
NSE3	YDR288W	UBX4	P54730	416 aa		5.44	□□□□□ -1.54
NSE3	YDR288W	EFR3	Q03653	782 aa	Known RBP	5.44	□□□□□ -1.54
NSE3	YDR288W	YPL216W	Q08964	1102 aa		5.44	□□□□□ -1.54
NSE3	YDR288W	BMS1	Q08965	1183 aa	Known RBP	5.44	□□□□□ -1.54
NSE3	YDR288W	MRH1	Q12117	320 aa	Predicted RBP	5.44	□□□□□ -1.54
NSE3	YDR288W	CAP1	P28495	268 aa	Known RBP	5.43	□□□□□ -1.54
NSE3	YDR288W	MTH1	P35198	433 aa		5.43	□□□□□ -1.54
NSE3	YDR288W	PMT6	P42934	759 aa		5.43	□□□□□ -1.54
NSE3	YDR288W	STU2	P46675	888 aa		5.43	□□□□□ -1.54
NSE3	YDR288W	NGL2	Q03264	515 aa	Known RBP	5.43	□□□□□ -1.54
NSE3	YDR288W	ARR3	Q06598	404 aa		5.43	□□□□□ -1.54
NSE3	YDR288W	CTT1	P06115	562 aa		5.42	□□□□□ -1.54
NSE3	YDR288W	BET2	P20133	325 aa		5.42	□□□□□ -1.54
NSE3	YDR288W	DSS4	P32601	143 aa		5.42	□□□□□ -1.54
NSE3	YDR288W	MRPL7	P36519	292 aa		5.42	□□□□□ -1.54
NSE3	YDR288W	YHL041W	P38730	149 aa		5.42	□□□□□ -1.54
NSE3	YDR288W	GSM1	P42950	618 aa		5.42	□□□□□ -1.54
NSE3	YDR288W	MAD3	P47074	515 aa		5.42	□□□□□ -1.54
NSE3	YDR288W	PUS4	P48567	403 aa	Known RBP	5.42	□□□□□ -1.54
NSE3	YDR288W	TRS23	Q03784	219 aa		5.42	□□□□□ -1.54
NSE3	YDR288W	MDM20	Q12387	796 aa	Known RBP	5.42	□□□□□ -1.54
NSE3	YDR288W	PGI1	P12709	554 aa	Known RBP	5.41	□□□□□ -1.54
NSE3	YDR288W	APM3	P38153	483 aa		5.41	□□□□□ -1.54
NSE3	YDR288W	YLF2	P38746	405 aa		5.41	□□□□□ -1.54
NSE3	YDR288W	PIH1	P38768	344 aa		5.41	□□□□□ -1.54
NSE3	YDR288W	RRP8	P38961	392 aa	Known RBP	5.41	□□□□□ -1.54
NSE3	YDR288W	VFA1	P40080	203 aa		5.41	□□□□□ -1.54
NSE3	YDR288W	IMA5	P40884	581 aa		5.41	□□□□□ -1.54
NSE3	YDR288W	MSS18	P08593	268 aa		5.4	□□□□□ -1.54
NSE3	YDR288W	GFA1	P14742	717 aa	Known RBP	5.4	□□□□□ -1.54
NSE3	YDR288W	SEC18	P18759	758 aa	Known RBP	5.4	□□□□□ -1.54
NSE3	YDR288W	PTH2	P34222	208 aa		5.4	□□□□□ -1.54
NSE3	YDR288W	UBS1	P38290	277 aa		5.4	□□□□□ -1.54
NSE3	YDR288W	CCT7	P42943	550 aa	Known RBP	5.4	□□□□□ -1.54
NSE3	YDR288W	YIP4	P53093	235 aa		5.4	□□□□□ -1.54
NSE3	YDR288W	SNF12	P53628	566 aa		5.4	□□□□□ -1.54
NSE3	YDR288W	HOF1	Q05080	669 aa		5.4	□□□□□ -1.54
NSE3	YDR288W	CRD1	Q07560	283 aa		5.4	□□□□□ -1.54
NSE3	YDR288W	IRC10	Q08118	586 aa		5.4	□□□□□ -1.54
NSE3	YDR288W	TGS1	Q12052	315 aa		5.4	□□□□□ -1.54
NSE3	YDR288W	TAF3	Q12297	353 aa		5.4	□□□□□ -1.54
NSE3	YDR288W	STB5	P38699	743 aa		5.39	□□□□□ -1.55
NSE3	YDR288W	FAF1	P40546	346 aa	Predicted RBP	5.39	□□□□□ -1.55
NSE3	YDR288W	ACS1	Q01574	713 aa		5.39	□□□□□ -1.55
NSE3	YDR288W	ATG16	Q03818	150 aa		5.39	□□□□□ -1.55
NSE3	YDR288W	PIF1	P07271	859 aa		5.38	□□□□□ -1.55
NSE3	YDR288W	LOT5	P34234	306 aa		5.38	□□□□□ -1.55
NSE3	YDR288W	TDP1	P38319	544 aa		5.38	□□□□□ -1.55
NSE3	YDR288W	IDS2	P46958	469 aa		5.38	□□□□□ -1.55
NSE3	YDR288W	BUD17	P53727	317 aa		5.38	□□□□□ -1.55
NSE3	YDR288W	YDR179W-A	Q03983	463 aa		5.38	□□□□□ -1.55
NSE3	YDR288W	YDL073W	Q07454	984 aa		5.38	□□□□□ -1.55
NSE3	YDR288W	AAD4	Q07747	329 aa		5.38	□□□□□ -1.55
NSE3	YDR288W	PHO5	P00635	467 aa		5.37	□□□□□ -1.55
NSE3	YDR288W	PWP2	P25635	923 aa	Known RBP	5.37	□□□□□ -1.55
NSE3	YDR288W	CNE1	P27825	502 aa		5.37	□□□□□ -1.55
NSE3	YDR288W	MRS6	P32864	603 aa	Known RBP	5.37	□□□□□ -1.55
NSE3	YDR288W	VPS73	P53142	486 aa	Known RBP	5.37	□□□□□ -1.55
NSE3	YDR288W	MOT3	P54785	490 aa	Known RBP	5.37	□□□□□ -1.55
NSE3	YDR288W	VPS64	Q03944	604 aa		5.37	□□□□□ -1.55
NSE3	YDR288W	BRE1	Q07457	700 aa	Known RBP	5.37	□□□□□ -1.55
NSE3	YDR288W	STE12	P13574	688 aa		5.36	□□□□□ -1.55
NSE3	YDR288W	POL3	P15436	1097 aa		5.36	□□□□□ -1.55
NSE3	YDR288W	STE4	P18851	423 aa		5.36	□□□□□ -1.55
NSE3	YDR288W	VPS34	P22543	875 aa		5.36	□□□□□ -1.55
NSE3	YDR288W	RPS7A	P26786	190 aa	Known RBP	5.36	□□□□□ -1.55
NSE3	YDR288W	VPS24	P36095	224 aa	Known RBP	5.36	□□□□□ -1.55
NSE3	YDR288W	CCL1	P37366	393 aa		5.36	□□□□□ -1.55
NSE3	YDR288W	ACA1	P39970	489 aa		5.36	□□□□□ -1.55
NSE3	YDR288W	ARA2	Q04212	335 aa		5.36	□□□□□ -1.55
NSE3	YDR288W	ENT2	Q05785	613 aa		5.36	□□□□□ -1.55
NSE3	YDR288W	RPN13	O13563	156 aa		5.35	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 83 ms