RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W HRB1P38922 454 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
SCC2YDR180W SMF1P38925 575 aa1.11□□□□□ -2.23
SCC2YDR180W CKB2P38930 258 aa1.11□□□□□ -2.23
SCC2YDR180W ACO2P39533 789 aa1.11□□□□□ -2.23
SCC2YDR180W UBP5P39944 805 aa1.11□□□□□ -2.23
SCC2YDR180W GPP2P40106 250 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W HOS4P40480 1083 aa1.11□□□□□ -2.23
SCC2YDR180W PRP31P49704 494 aaPredicted RBP1.11□□□□□ -2.23
SCC2YDR180W SOK2P53438 785 aaPredicted RBP1.11□□□□□ -2.23
SCC2YDR180W IST1P53843 298 aaPredicted RBP1.11□□□□□ -2.23
SCC2YDR180W GTR1Q00582 310 aa1.11□□□□□ -2.23
SCC2YDR180W RPT6Q01939 405 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W YPL034WQ03083 165 aa1.11□□□□□ -2.23
SCC2YDR180W YML131WQ03102 365 aa1.11□□□□□ -2.23
SCC2YDR180W SAS4Q04003 481 aa1.11□□□□□ -2.23
SCC2YDR180W YMR018WQ04364 514 aa1.11□□□□□ -2.23
SCC2YDR180W ERB1Q04660 807 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W YMR074CQ04773 145 aa1.11□□□□□ -2.23
SCC2YDR180W ATG33Q06485 197 aa1.11□□□□□ -2.23
SCC2YDR180W IRA1P18963 3092 aa1.11□□□□□ -2.23
SCC2YDR180W RPS3P05750 240 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W DSF1P0CX08 502 aa1.11□□□□□ -2.23
SCC2YDR180W YNR073CP0CX09 502 aa1.11□□□□□ -2.23
SCC2YDR180W ENA1P13587 1091 aa1.11□□□□□ -2.23
SCC2YDR180W HOM2P13663 365 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W DBP5P20449 482 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W OPI1P21957 404 aa1.11□□□□□ -2.23
SCC2YDR180W YCR051WP25631 222 aa1.11□□□□□ -2.23
SCC2YDR180W DPB3P27344 201 aa1.11□□□□□ -2.23
SCC2YDR180W TFC3P34111 1160 aa1.11□□□□□ -2.23
SCC2YDR180W KAP104P38217 918 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W GDT1P38301 280 aaPredicted RBP1.11□□□□□ -2.23
SCC2YDR180W TDA3P38758 523 aa1.11□□□□□ -2.23
SCC2YDR180W SPL2P38839 148 aa1.11□□□□□ -2.23
SCC2YDR180W SHU2P38957 223 aa1.11□□□□□ -2.23
SCC2YDR180W SPC72P39723 622 aa1.11□□□□□ -2.23
SCC2YDR180W SAP1P39955 897 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W AVT6P40074 448 aa1.11□□□□□ -2.23
SCC2YDR180W FET4P40988 552 aa1.11□□□□□ -2.23
SCC2YDR180W YGR210CP42942 411 aa1.11□□□□□ -2.23
SCC2YDR180W IML2P47031 731 aa1.11□□□□□ -2.23
SCC2YDR180W SNP1Q00916 300 aaPredicted RBP1.11□□□□□ -2.23
SCC2YDR180W ENA2Q01896 1091 aa1.11□□□□□ -2.23
SCC2YDR180W RNY1Q02933 434 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W DIG1Q03063 452 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W USA1Q03714 838 aa1.11□□□□□ -2.23
SCC2YDR180W TAF12Q03761 539 aa1.11□□□□□ -2.23
SCC2YDR180W SOV1Q04748 898 aa1.11□□□□□ -2.23
SCC2YDR180W SSQ1Q05931 657 aaPredicted RBP1.11□□□□□ -2.23
SCC2YDR180W ARV1Q06541 321 aa1.11□□□□□ -2.23
SCC2YDR180W SSP2Q08646 371 aa1.11□□□□□ -2.23
SCC2YDR180W GPN2Q08726 347 aaPredicted RBP1.11□□□□□ -2.23
SCC2YDR180W SFI1Q12369 946 aa1.11□□□□□ -2.23
SCC2YDR180W OCA6Q12454 224 aa1.11□□□□□ -2.23
SCC2YDR180W ENA5Q12691 1091 aa1.11□□□□□ -2.23
SCC2YDR180W RPS21BQ3E754 87 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W URA3P03962 267 aa1.11□□□□□ -2.23
SCC2YDR180W CPA2P03965 1118 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W ADE8P04161 214 aa1.11□□□□□ -2.23
SCC2YDR180W HTS1P07263 546 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W YMR085WP0CF18 432 aa1.11□□□□□ -2.23
SCC2YDR180W TAF13P11747 167 aa1.11□□□□□ -2.23
SCC2YDR180W HMG2P12684 1045 aa1.11□□□□□ -2.23
SCC2YDR180W SPO11P23179 398 aa1.11□□□□□ -2.23
SCC2YDR180W YCL002CP25565 263 aa1.11□□□□□ -2.23
SCC2YDR180W NFU1P32860 256 aa1.11□□□□□ -2.23
SCC2YDR180W SPC29P33419 253 aa1.11□□□□□ -2.23
SCC2YDR180W PTH2P34222 208 aa1.11□□□□□ -2.23
SCC2YDR180W YBR137WP38276 179 aa1.11□□□□□ -2.23
SCC2YDR180W SET5P38890 526 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W INP51P40559 946 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W AIP1P46680 615 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W ALY2P47029 1046 aa1.11□□□□□ -2.23
SCC2YDR180W MRPS35P53292 345 aa1.11□□□□□ -2.23
SCC2YDR180W LSC1P53598 329 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W COP1P53622 1201 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W ELA1P53861 379 aaPredicted RBP1.11□□□□□ -2.23
SCC2YDR180W NOG1Q02892 647 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W ECM11Q04110 302 aa1.11□□□□□ -2.23
SCC2YDR180W SDH5Q08230 162 aa1.11□□□□□ -2.23
SCC2YDR180W MCH5Q08777 521 aa1.11□□□□□ -2.23
SCC2YDR180W GUP2Q08929 609 aa1.11□□□□□ -2.23
SCC2YDR180W YPR027CQ12079 277 aa1.11□□□□□ -2.23
SCC2YDR180W ERG11P10614 530 aa1.1□□□□□ -2.23
SCC2YDR180W HOM3P10869 527 aa1.1□□□□□ -2.23
SCC2YDR180W NAT1P12945 854 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W PMS1P14242 873 aa1.1□□□□□ -2.23
SCC2YDR180W PHO3P24031 467 aa1.1□□□□□ -2.23
SCC2YDR180W RAD57P25301 460 aa1.1□□□□□ -2.23
SCC2YDR180W CAP1P28495 268 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W CHS3P29465 1165 aa1.1□□□□□ -2.23
SCC2YDR180W MRE11P32829 692 aa1.1□□□□□ -2.23
SCC2YDR180W IMP3P32899 183 aaPredicted RBP1.1□□□□□ -2.23
SCC2YDR180W SIP2P34164 415 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W APL2P36000 726 aaPredicted RBP1.1□□□□□ -2.23
SCC2YDR180W MYO3P36006 1272 aa1.1□□□□□ -2.23
SCC2YDR180W TRZ1P36159 838 aaPredicted RBP1.1□□□□□ -2.23
SCC2YDR180W YLF2P38746 405 aa1.1□□□□□ -2.23
SCC2YDR180W RPN10P38886 268 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W YEL068CP39977 110 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms