RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W GLG1P36143 616 aa4.38□□□□□ -1.71
UBC9YDL064W YJL206CP39529 758 aa4.38□□□□□ -1.71
UBC9YDL064W QRI7P43122 407 aa4.38□□□□□ -1.71
UBC9YDL064W PUS4P48567 403 aaKnown RBP4.38□□□□□ -1.71
UBC9YDL064W HIM1Q06674 414 aa4.38□□□□□ -1.71
UBC9YDL064W APA1P16550 321 aaKnown RBP4.37□□□□□ -1.71
UBC9YDL064W STB5P38699 743 aa4.37□□□□□ -1.71
UBC9YDL064W YHL041WP38730 149 aa4.37□□□□□ -1.71
UBC9YDL064W SWD1P39706 426 aa4.37□□□□□ -1.71
UBC9YDL064W NOP2P40991 618 aaKnown RBP4.37□□□□□ -1.71
UBC9YDL064W MAD3P47074 515 aa4.37□□□□□ -1.71
UBC9YDL064W TIM44Q01852 431 aa4.37□□□□□ -1.71
UBC9YDL064W EFR3Q03653 782 aaKnown RBP4.37□□□□□ -1.71
UBC9YDL064W HOS1Q12214 470 aa4.37□□□□□ -1.71
UBC9YDL064W TAF3Q12297 353 aa4.37□□□□□ -1.71
UBC9YDL064W ARP7Q12406 477 aa4.37□□□□□ -1.71
UBC9YDL064W STE4P18851 423 aa4.36□□□□□ -1.71
UBC9YDL064W VPS33P20795 691 aa4.36□□□□□ -1.71
UBC9YDL064W KIN3P22209 435 aa4.36□□□□□ -1.71
UBC9YDL064W SDS22P36047 338 aa4.36□□□□□ -1.71
UBC9YDL064W GMH1P36125 273 aa4.36□□□□□ -1.71
UBC9YDL064W APL3P38065 1025 aa4.36□□□□□ -1.71
UBC9YDL064W SSP120P39931 234 aaKnown RBP4.36□□□□□ -1.71
UBC9YDL064W YEL025CP39991 1188 aa4.36□□□□□ -1.71
UBC9YDL064W MIT1P40002 666 aa4.36□□□□□ -1.71
UBC9YDL064W UBA2P52488 636 aa4.36□□□□□ -1.71
UBC9YDL064W TRS23Q03784 219 aa4.36□□□□□ -1.71
UBC9YDL064W UFO1Q04511 668 aa4.36□□□□□ -1.71
UBC9YDL064W BRE1Q07457 700 aaKnown RBP4.36□□□□□ -1.71
UBC9YDL064W RRP6Q12149 733 aaKnown RBP4.36□□□□□ -1.71
UBC9YDL064W SUT2Q12286 268 aa4.36□□□□□ -1.71
UBC9YDL064W SEC18P18759 758 aaKnown RBP4.35□□□□□ -1.71
UBC9YDL064W EMP70P32802 667 aa4.35□□□□□ -1.71
UBC9YDL064W YJL193WP39542 402 aa4.35□□□□□ -1.71
UBC9YDL064W GSM1P42950 618 aa4.35□□□□□ -1.71
UBC9YDL064W SPC98P53540 846 aa4.35□□□□□ -1.71
UBC9YDL064W TEP1P53916 434 aa4.35□□□□□ -1.71
UBC9YDL064W MFM1Q02783 413 aa4.35□□□□□ -1.71
UBC9YDL064W TUF1P02992 437 aaKnown RBP4.34□□□□□ -1.71
UBC9YDL064W PGI1P12709 554 aaKnown RBP4.34□□□□□ -1.71
UBC9YDL064W DSS4P32601 143 aa4.34□□□□□ -1.71
UBC9YDL064W YMC2P38087 329 aa4.34□□□□□ -1.71
UBC9YDL064W RIM4P38741 713 aa4.34□□□□□ -1.71
UBC9YDL064W YIP4P53093 235 aa4.34□□□□□ -1.71
UBC9YDL064W HOF1Q05080 669 aa4.34□□□□□ -1.71
UBC9YDL064W IRC10Q08118 586 aa4.34□□□□□ -1.71
UBC9YDL064W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71 RIP-Chip
UBC9YDL064W PHO5P00635 467 aa4.33□□□□□ -1.72
UBC9YDL064W PMC1P38929 1173 aaPredicted RBP4.33□□□□□ -1.72
UBC9YDL064W BDH2P39713 417 aa4.33□□□□□ -1.72
UBC9YDL064W SPC72P39723 622 aa4.33□□□□□ -1.72
UBC9YDL064W PMT6P42934 759 aa4.33□□□□□ -1.72
UBC9YDL064W COS12P53053 380 aa4.33□□□□□ -1.72
UBC9YDL064W VPS73P53142 486 aaKnown RBP4.33□□□□□ -1.72
UBC9YDL064W UBX4P54730 416 aa4.33□□□□□ -1.72
UBC9YDL064W TRI1Q05024 226 aa4.33□□□□□ -1.72
UBC9YDL064W BMS1Q08965 1183 aaKnown RBP4.33□□□□□ -1.72
UBC9YDL064W SEC12P11655 471 aa4.32□□□□□ -1.72
UBC9YDL064W CDC43P18898 376 aa4.32□□□□□ -1.72
UBC9YDL064W CNE1P27825 502 aa4.32□□□□□ -1.72
UBC9YDL064W DHR2P36009 735 aaPredicted RBP4.32□□□□□ -1.72
UBC9YDL064W APM3P38153 483 aa4.32□□□□□ -1.72
UBC9YDL064W TDP1P38319 544 aa4.32□□□□□ -1.72
UBC9YDL064W RPT2P40327 437 aaKnown RBP4.32□□□□□ -1.72
UBC9YDL064W TAN1P53072 289 aaPredicted RBP4.32□□□□□ -1.72
UBC9YDL064W BUD17P53727 317 aa4.32□□□□□ -1.72
UBC9YDL064W YDR179W-AQ03983 463 aa4.32□□□□□ -1.72
UBC9YDL064W ENT2Q05785 613 aa4.32□□□□□ -1.72
UBC9YDL064W STE12P13574 688 aa4.31□□□□□ -1.72
UBC9YDL064W MSH1P25846 959 aa4.31□□□□□ -1.72
UBC9YDL064W CAP1P28495 268 aaKnown RBP4.31□□□□□ -1.72
UBC9YDL064W PRE2P30656 287 aaKnown RBP4.31□□□□□ -1.72
UBC9YDL064W STT3P39007 718 aaKnown RBP4.31□□□□□ -1.72
UBC9YDL064W RPS15Q01855 142 aaKnown RBP4.31□□□□□ -1.72
UBC9YDL064W CEF1Q03654 590 aaPredicted RBP4.31□□□□□ -1.72
UBC9YDL064W AAD4Q07747 329 aa4.31□□□□□ -1.72
UBC9YDL064W SWI4P25302 1093 aaKnown RBP4.3□□□□□ -1.72
UBC9YDL064W RPS7AP26786 190 aaKnown RBP4.3□□□□□ -1.72
UBC9YDL064W TAF5P38129 798 aa4.3□□□□□ -1.72
UBC9YDL064W YPT10P38146 199 aa4.3□□□□□ -1.72
UBC9YDL064W ACA1P39970 489 aa4.3□□□□□ -1.72
UBC9YDL064W POL31P46957 487 aa4.3□□□□□ -1.72
UBC9YDL064W ASN1P49089 572 aaKnown RBP4.3□□□□□ -1.72
UBC9YDL064W DAK1P54838 584 aaKnown RBP4.3□□□□□ -1.72
UBC9YDL064W NGL2Q03264 515 aaKnown RBP4.3□□□□□ -1.72
UBC9YDL064W TRS31Q03337 283 aa4.3□□□□□ -1.72
UBC9YDL064W USA1Q03714 838 aa4.3□□□□□ -1.72
UBC9YDL064W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
UBC9YDL064W ICL2Q12031 575 aa4.3□□□□□ -1.72
UBC9YDL064W MDM20Q12387 796 aaKnown RBP4.3□□□□□ -1.72
UBC9YDL064W BET2P20133 325 aa4.29□□□□□ -1.72
UBC9YDL064W DMC1P25453 334 aa4.29□□□□□ -1.72
UBC9YDL064W FRD1P32614 470 aaKnown RBP4.29□□□□□ -1.72
UBC9YDL064W FUI1P38196 639 aa4.29□□□□□ -1.72
UBC9YDL064W YLF2P38746 405 aa4.29□□□□□ -1.72
UBC9YDL064W IES5P40060 125 aa4.29□□□□□ -1.72
UBC9YDL064W VFA1P40080 203 aa4.29□□□□□ -1.72
UBC9YDL064W THI6P41835 540 aa4.29□□□□□ -1.72
UBC9YDL064W ERR3P42222 437 aa4.29□□□□□ -1.72
UBC9YDL064W CIA1Q05583 330 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms