RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	BUD8	P41698	603 aa		2.59	□□□□□ -1.99
HMRA2	YCR096C	AIM14	P53109	570 aa		2.59	□□□□□ -1.99
HMRA2	YCR096C	BOP3	P53958	396 aa		2.59	□□□□□ -1.99
HMRA2	YCR096C	FDC1	Q03034	503 aa		2.59	□□□□□ -1.99
HMRA2	YCR096C	WAR1	Q03631	944 aa		2.59	□□□□□ -1.99
HMRA2	YCR096C	RTT103	Q05543	409 aa		2.59	□□□□□ -1.99
HMRA2	YCR096C	HRD3	Q05787	833 aa		2.59	□□□□□ -1.99
HMRA2	YCR096C	PCL8	Q08966	492 aa		2.59	□□□□□ -1.99
HMRA2	YCR096C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
HMRA2	YCR096C	MEF1	P25039	761 aa		2.58	□□□□□ -2
HMRA2	YCR096C	RTT107	P38850	1070 aa		2.58	□□□□□ -2
HMRA2	YCR096C	TES1	P41903	349 aa	Known RBP	2.58	□□□□□ -2
HMRA2	YCR096C	YJL049W	P47048	450 aa		2.58	□□□□□ -2
HMRA2	YCR096C	YPS7	Q06325	596 aa		2.58	□□□□□ -2
HMRA2	YCR096C	ATG33	Q06485	197 aa		2.58	□□□□□ -2
HMRA2	YCR096C	CDC53	Q12018	815 aa	Known RBP	2.58	□□□□□ -2
HMRA2	YCR096C	YMR230W-A	Q3E7B5	62 aa		2.58	□□□□□ -2
HMRA2	YCR096C	HMG1	P12683	1054 aa		2.57	□□□□□ -2
HMRA2	YCR096C	COQ3	P27680	312 aa		2.57	□□□□□ -2
HMRA2	YCR096C	YJU2	P28320	278 aa	Predicted RBP	2.57	□□□□□ -2
HMRA2	YCR096C	FMP46	P36141	133 aa	Known RBP	2.57	□□□□□ -2
HMRA2	YCR096C	YBR139W	P38109	508 aa		2.57	□□□□□ -2
HMRA2	YCR096C	BRN1	P38170	754 aa		2.57	□□□□□ -2
HMRA2	YCR096C	SLX1	P38324	304 aa		2.57	□□□□□ -2
HMRA2	YCR096C	CRG1	P38892	291 aa	RIP-Chip data	2.57	□□□□□ -2	not detected
HMRA2	YCR096C	SPO1	P53541	631 aa		2.57	□□□□□ -2
HMRA2	YCR096C	YMR317W	Q04893	1140 aa		2.57	□□□□□ -2
HMRA2	YCR096C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
HMRA2	YCR096C	TGS1	Q12052	315 aa		2.57	□□□□□ -2
HMRA2	YCR096C	HOP1	P20050	605 aa		2.56	□□□□□ -2
HMRA2	YCR096C	LOT5	P34234	306 aa		2.56	□□□□□ -2
HMRA2	YCR096C	YIL092W	P40497	633 aa		2.56	□□□□□ -2
HMRA2	YCR096C	PXA1	P41909	870 aa		2.56	□□□□□ -2
HMRA2	YCR096C	YLR407W	Q06070	228 aa		2.56	□□□□□ -2
HMRA2	YCR096C	UBX3	Q12229	455 aa		2.56	□□□□□ -2
HMRA2	YCR096C	GSY1	P23337	708 aa		2.55	□□□□□ -2
HMRA2	YCR096C	RPT3	P33298	428 aa	Known RBP	2.55	□□□□□ -2
HMRA2	YCR096C	FTR1	P40088	404 aa		2.55	□□□□□ -2
HMRA2	YCR096C	YMR210W	Q03649	449 aa		2.55	□□□□□ -2
HMRA2	YCR096C	DSE3	Q08729	430 aa		2.55	□□□□□ -2
HMRA2	YCR096C	ATX2	Q12067	313 aa		2.55	□□□□□ -2
HMRA2	YCR096C	GAL4	P04386	881 aa		2.54	□□□□□ -2
HMRA2	YCR096C	CDS1	P38221	457 aa		2.54	□□□□□ -2
HMRA2	YCR096C	SKP2	P42843	763 aa		2.54	□□□□□ -2
HMRA2	YCR096C	YMR034C	Q05131	434 aa	Predicted RBP	2.54	□□□□□ -2
HMRA2	YCR096C	BI2	P03873	423 aa		2.53	□□□□□ -2
HMRA2	YCR096C	PRE4	P30657	266 aa		2.53	□□□□□ -2
HMRA2	YCR096C	DHR2	P36009	735 aa	Predicted RBP	2.53	□□□□□ -2
HMRA2	YCR096C	YKR075C	P36155	307 aa		2.53	□□□□□ -2
HMRA2	YCR096C	IMD2	P38697	523 aa	Known RBP	2.53	□□□□□ -2
HMRA2	YCR096C	IMD3	P50095	523 aa	Known RBP	2.53	□□□□□ -2
HMRA2	YCR096C	HOS2	P53096	452 aa	Predicted RBP	2.53	□□□□□ -2
HMRA2	YCR096C	USA1	Q03714	838 aa		2.53	□□□□□ -2
HMRA2	YCR096C	STP4	Q07351	490 aa		2.53	□□□□□ -2
HMRA2	YCR096C	GIN4	Q12263	1142 aa		2.53	□□□□□ -2
HMRA2	YCR096C	PCL2	P25693	308 aa		2.52	□□□□□ -2.01
HMRA2	YCR096C	CAP1	P28495	268 aa	Known RBP	2.52	□□□□□ -2.01
HMRA2	YCR096C	CCL1	P37366	393 aa		2.52	□□□□□ -2.01
HMRA2	YCR096C	PCM1	P38628	557 aa	Known RBP	2.52	□□□□□ -2.01
HMRA2	YCR096C	HLR1	Q04429	423 aa		2.52	□□□□□ -2.01
HMRA2	YCR096C	CYK3	Q07533	885 aa		2.52	□□□□□ -2.01
HMRA2	YCR096C	MLH2	Q07980	695 aa		2.52	□□□□□ -2.01
HMRA2	YCR096C	MAL31	P38156	614 aa		2.51	□□□□□ -2.01
HMRA2	YCR096C	YEL025C	P39991	1188 aa		2.51	□□□□□ -2.01
HMRA2	YCR096C	ARR3	Q06598	404 aa		2.51	□□□□□ -2.01
HMRA2	YCR096C	AHA1	Q12449	350 aa	Known RBP	2.51	□□□□□ -2.01
HMRA2	YCR096C	MAK32	P23060	363 aa		2.5	□□□□□ -2.01
HMRA2	YCR096C	TIM23	P32897	222 aa		2.5	□□□□□ -2.01
HMRA2	YCR096C	CHZ1	P40019	153 aa	Predicted RBP	2.5	□□□□□ -2.01
HMRA2	YCR096C	YIL169C	P40442	995 aa		2.5	□□□□□ -2.01
HMRA2	YCR096C	SNU56	Q03782	492 aa	Known RBP	2.5	□□□□□ -2.01
HMRA2	YCR096C	PPN1	Q04119	674 aa		2.5	□□□□□ -2.01
HMRA2	YCR096C	COG8	Q04632	607 aa		2.5	□□□□□ -2.01
HMRA2	YCR096C	NSE3	Q05541	303 aa		2.5	□□□□□ -2.01
HMRA2	YCR096C	PNO1	Q99216	274 aa	Known RBP	2.5	□□□□□ -2.01
HMRA2	YCR096C	CET1	O13297	549 aa	Predicted RBP	2.49	□□□□□ -2.01
HMRA2	YCR096C	EHT1	P38295	451 aa		2.49	□□□□□ -2.01
HMRA2	YCR096C	SMA2	Q04658	369 aa		2.49	□□□□□ -2.01
HMRA2	YCR096C	YOR131C	Q12486	218 aa		2.49	□□□□□ -2.01
HMRA2	YCR096C	VRG4	P40107	337 aa		2.48	□□□□□ -2.01
HMRA2	YCR096C	CIN1	P40987	1014 aa		2.48	□□□□□ -2.01
HMRA2	YCR096C	AAC1	P04710	309 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	YFL068W	P0CX99	160 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	YLL066W-A	P0CY00	160 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	YLL067W-A	P0CY01	160 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.47	□□□□□ -2.01	not detected
HMRA2	YCR096C	SFL1	P20134	766 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	PPZ1	P26570	692 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	SCO2	P38072	301 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	FTH1	P38310	465 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	TOM71	P38825	639 aa	Known RBP	2.47	□□□□□ -2.01
HMRA2	YCR096C	LRO1	P40345	661 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	PRM2	P40534	656 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	TAF4	P50105	388 aa		2.47	□□□□□ -2.01
HMRA2	YCR096C	DHH1	P39517	506 aa	Known RBP	2.46	□□□□□ -2.02
HMRA2	YCR096C	SAD1	P43589	448 aa		2.46	□□□□□ -2.02
HMRA2	YCR096C	VTC3	Q02725	835 aa		2.46	□□□□□ -2.02
HMRA2	YCR096C	RAD33	Q04231	177 aa		2.46	□□□□□ -2.02
HMRA2	YCR096C	PFA4	Q12006	378 aa		2.46	□□□□□ -2.02
HMRA2	YCR096C	RPS17A	P02407	136 aa	Known RBP	2.45	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms