RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ORC3Q9UBD5 711 aaPredicted RBP23.07■■□□□ 1.28
PCDHB11-202ENST00000624887 ABCF2Q9UG63 623 aa23.07■■□□□ 1.28
PCDHB11-202ENST00000624887 TDO2P48775 406 aa23.07■■□□□ 1.28
PCDHB11-202ENST00000624887 CTDSPL2Q05D32 466 aa23.07■■□□□ 1.28
PCDHB11-202ENST00000624887 FBXO33Q7Z6M2 555 aa23.07■■□□□ 1.28
PCDHB11-202ENST00000624887 MIGA1Q8NAN2 632 aa23.07■■□□□ 1.28
PCDHB11-202ENST00000624887 LRRC4BQ9NT99 713 aa23.07■■□□□ 1.28
PCDHB11-202ENST00000624887 RCOR1Q9UKL0 485 aa23.07■■□□□ 1.28
PCDHB11-202ENST00000624887 SEMA3EO15041 775 aa23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 GUCY1B3Q02153 619 aa23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 APOA5Q6Q788 366 aa23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 SGMS1Q86VZ5 419 aa23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 RGS22Q8NE09 1264 aa23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 STAG1Q8WVM7 1258 aa23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 ZNF396Q96N95 335 aaPredicted RBP23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 KRT23Q9C075 422 aa23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 ANKRD2Q9GZV1 360 aa23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 NUP62CLQ9H1M0 184 aa23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 CACNA1SQ13698 1873 aa23.06■■□□□ 1.28
PCDHB11-202ENST00000624887 RFC4P35249 363 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 METAP2P50579 478 aaKnown RBP eCLIP23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 ADGRA1Q86SQ6 560 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 RAB11FIP4Q86YS3 637 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 C8orf76Q96K31 380 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 LY9Q9HBG7 655 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 INCENPQ9NQS7 918 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 DDX19AQ9NUU7 478 aaKnown RBP23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 RAI14Q9P0K7 980 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 ZSWIM5Q9P217 1185 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 TACC3Q9Y6A5 838 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 RXRBP28702 533 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 LIFRP42702 1097 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 HS1BP3Q53T59 392 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 TRAPPC3LQ5T215 181 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 MFSD6Q6ZSS7 791 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 ILDR1Q86SU0 546 aaPredicted RBP23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 FBXO18Q8NFZ0 1043 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 DACT1Q9NYF0 836 aa23.05■■□□□ 1.28
PCDHB11-202ENST00000624887 TM4SF1P30408 202 aa23.04■■□□□ 1.28
PCDHB11-202ENST00000624887 SLC27A3Q5K4L6 730 aa23.04■■□□□ 1.28
PCDHB11-202ENST00000624887 EP400Q96L91 3159 aa23.04■■□□□ 1.28
PCDHB11-202ENST00000624887 PDS5AQ29RF7 1337 aaKnown RBP23.03■■□□□ 1.28
PCDHB11-202ENST00000624887 MAGEB6P1A0A0J9YX57 407 aa23.03■■□□□ 1.28
PCDHB11-202ENST00000624887 KDM4AO75164 1064 aa23.03■■□□□ 1.28
PCDHB11-202ENST00000624887 TMEM67Q5HYA8 995 aa23.03■■□□□ 1.28
PCDHB11-202ENST00000624887 USP28Q96RU2 1077 aa23.03■■□□□ 1.28
PCDHB11-202ENST00000624887 SENP2Q9HC62 589 aa23.03■■□□□ 1.28
PCDHB11-202ENST00000624887 CDKL5O76039 1030 aa23.03■■□□□ 1.28
PCDHB11-202ENST00000624887 MAP3K11Q16584 847 aa23.03■■□□□ 1.28
PCDHB11-202ENST00000624887 CCDC24Q8N4L8 307 aa23.03■■□□□ 1.28
PCDHB11-202ENST00000624887 BICD2Q8TD16 824 aa23.03■■□□□ 1.28
PCDHB11-202ENST00000624887 ZBTB43O43298 467 aa23.02■■□□□ 1.28
PCDHB11-202ENST00000624887 CLCN1P35523 988 aa23.02■■□□□ 1.28
PCDHB11-202ENST00000624887 RIOK1Q9BRS2 568 aaKnown RBP23.02■■□□□ 1.28
PCDHB11-202ENST00000624887 CCDC192P0DO97 292 aa23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 KLRK1P26718 216 aa23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 CEBPZQ03701 1054 aaKnown RBP23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 NFXL1Q6ZNB6 911 aa23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 MTA3Q9BTC8 594 aa23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 CLSTN2Q9H4D0 955 aa23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 RNF41Q9H4P4 317 aaPredicted RBP23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 TNRC6CQ9HCJ0 1690 aaKnown RBP23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 MYH13Q9UKX3 1938 aa23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 IFIT3O14879 490 aaKnown RBP23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 OTUD7BQ6GQQ9 843 aa23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 CPLX2Q6PUV4 134 aaKnown RBP23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 FTOQ9C0B1 505 aaKnown RBP eCLIP23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 TNMDQ9H2S6 317 aa23.01■■□□□ 1.27
PCDHB11-202ENST00000624887 NR1I2O75469 434 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 ADRA2BP18089 450 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 CDC27P30260 824 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 HIBADHP31937 336 aaKnown RBP23■■□□□ 1.27
PCDHB11-202ENST00000624887 RBM43Q6ZSC3 357 aaKnown RBP23■■□□□ 1.27
PCDHB11-202ENST00000624887 MICU3Q86XE3 530 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 ANAPC4Q9UJX5 808 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 ZBTB22O15209 634 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 PPARAQ07869 468 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 NFIXQ14938 502 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 CAMK4Q16566 473 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 BRAPQ7Z569 592 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 FBXO41Q8TF61 875 aa23■■□□□ 1.27
PCDHB11-202ENST00000624887 NPHP1O15259 732 aa22.99■■□□□ 1.27
PCDHB11-202ENST00000624887 RXRAP19793 462 aa22.99■■□□□ 1.27
PCDHB11-202ENST00000624887 ZNF384Q8TF68 577 aa22.99■■□□□ 1.27
PCDHB11-202ENST00000624887 SDR42E1Q8WUS8 393 aa22.99■■□□□ 1.27
PCDHB11-202ENST00000624887 RTEL1Q9NZ71 1219 aa22.99■■□□□ 1.27
PCDHB11-202ENST00000624887 SLC12A7Q9Y666 1083 aa22.99■■□□□ 1.27
PCDHB11-202ENST00000624887 NID2Q14112 1375 aa22.99■■□□□ 1.27
PCDHB11-202ENST00000624887 GOLGA8AA7E2F4 631 aa22.98■■□□□ 1.27
PCDHB11-202ENST00000624887 SART3Q15020 963 aaKnown RBP22.98■■□□□ 1.27
PCDHB11-202ENST00000624887 NTRK3Q16288 839 aa22.98■■□□□ 1.27
PCDHB11-202ENST00000624887 ZSCAN30Q86W11 494 aa22.98■■□□□ 1.27
PCDHB11-202ENST00000624887 UBE2Q2Q8WVN8 375 aa22.98■■□□□ 1.27
PCDHB11-202ENST00000624887 FAM217BQ9NTX9 383 aaPredicted RBP22.98■■□□□ 1.27
PCDHB11-202ENST00000624887 CCDC69A6NI79 296 aa22.98■■□□□ 1.27
PCDHB11-202ENST00000624887 RRP12Q5JTH9 1297 aaKnown RBP22.98■■□□□ 1.27
PCDHB11-202ENST00000624887 RGS17Q9UGC6 210 aaPredicted RBP22.98■■□□□ 1.27
PCDHB11-202ENST00000624887 NSUN4Q96CB9 384 aaKnown RBP22.97■■□□□ 1.27
PCDHB11-202ENST00000624887 ALG1Q9BT22 464 aa22.97■■□□□ 1.27
PCDHB11-202ENST00000624887 BRIP1Q9BX63 1249 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms