RNA–Protein interactions for RNA: ENST00000617219.1

CFHR3-206, Transcript of complement factor H related 3, humanhuman

TSL 5 BASIC

Gene CFHR3, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-206ENST00000617219 GADD45BO75293 160 aaPredicted RBP6.72□□□□□ -1.33
CFHR3-206ENST00000617219 PTPRAP18433 802 aa6.72□□□□□ -1.33
CFHR3-206ENST00000617219 AFF1P51825 1210 aaKnown RBP6.72□□□□□ -1.33
CFHR3-206ENST00000617219 C8orf86Q6ZUL3 223 aa6.72□□□□□ -1.33
CFHR3-206ENST00000617219 WFDC8Q8IUA0 241 aa6.72□□□□□ -1.33
CFHR3-206ENST00000617219 TMEM102Q8N9M5 508 aaPredicted RBP6.72□□□□□ -1.33
CFHR3-206ENST00000617219 NPHS2Q9NP85 383 aa6.72□□□□□ -1.33
CFHR3-206ENST00000617219 MAP3K1Q13233 1512 aa6.71□□□□□ -1.33
CFHR3-206ENST00000617219 LDHBP07195 334 aaKnown RBP6.71□□□□□ -1.34
CFHR3-206ENST00000617219 P4HBP07237 508 aaKnown RBP6.71□□□□□ -1.34
CFHR3-206ENST00000617219 HOXB4P17483 251 aaPredicted RBP6.71□□□□□ -1.34
CFHR3-206ENST00000617219 TRAPPC3LQ5T215 181 aa6.71□□□□□ -1.34
CFHR3-206ENST00000617219 KIAA0319Q5VV43 1072 aa6.71□□□□□ -1.34
CFHR3-206ENST00000617219 ZKSCAN3Q9BRR0 538 aa6.71□□□□□ -1.34
CFHR3-206ENST00000617219 MUC3BQ9H195 1237 aa6.71□□□□□ -1.34
CFHR3-206ENST00000617219 EHD4Q9H223 541 aa6.71□□□□□ -1.34
CFHR3-206ENST00000617219 PPP4R2Q9NY27 417 aa6.71□□□□□ -1.34
CFHR3-206ENST00000617219 CCDC9Q9Y3X0 531 aaKnown RBP6.71□□□□□ -1.34
CFHR3-206ENST00000617219 C3P01024 1663 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 A0A1W2PP55 124 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 ACPPP15309 386 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 CDC27P30260 824 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 CABP4P57796 275 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 MSL1Q68DK7 614 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 LINC00114Q6XXX2 140 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 NPAS4Q8IUM7 802 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 BCL11AQ9H165 835 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 LIN7BQ9HAP6 207 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 LATS2Q9NRM7 1088 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 TRIM33Q9UPN9 1127 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 TRAK1Q9UPV9 953 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.7□□□□□ -1.34
CFHR3-206ENST00000617219 MYOM3Q5VTT5 1437 aa6.7□□□□□ -1.34
CFHR3-206ENST00000617219 ADGBQ8N7X0 1667 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 PREX1Q8TCU6 1659 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 NID1P14543 1247 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 COL8A1P27658 744 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 RAC1P63000 192 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 GRIK5Q16478 980 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 PRRT3Q5FWE3 981 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 PEAR1Q5VY43 1037 aaPredicted RBP6.69□□□□□ -1.34
CFHR3-206ENST00000617219 FAM117BQ6P1L5 589 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 GGT6Q6P531 493 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 IL22RA1Q8N6P7 574 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 ASAP3Q8TDY4 903 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 POP1Q99575 1024 aaKnown RBP6.69□□□□□ -1.34
CFHR3-206ENST00000617219 PLVAPQ9BX97 442 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 LACRTQ9GZZ8 138 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 SUV39H2Q9H5I1 410 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 RTEL1-TNFRSF6BF6WH68 1400 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 ARHGEF5Q12774 1597 aa6.69□□□□□ -1.34
CFHR3-206ENST00000617219 CLTCQ00610 1675 aaKnown RBP6.69□□□□□ -1.34
CFHR3-206ENST00000617219 UHRF1BP1Q6BDS2 1440 aa6.68□□□□□ -1.34
CFHR3-206ENST00000617219 CNTLNQ9NXG0 1405 aa6.68□□□□□ -1.34
CFHR3-206ENST00000617219 NFKBIEO00221 500 aa6.68□□□□□ -1.34
CFHR3-206ENST00000617219 PRPF40AO75400 957 aaKnown RBP6.68□□□□□ -1.34
CFHR3-206ENST00000617219 EPS8L3Q8TE67 593 aaKnown RBP6.68□□□□□ -1.34
CFHR3-206ENST00000617219 DCAF11Q8TEB1 546 aa6.68□□□□□ -1.34
CFHR3-206ENST00000617219 NXPE3Q969Y0 559 aa6.68□□□□□ -1.34
CFHR3-206ENST00000617219 FRMD6Q96NE9 622 aa6.68□□□□□ -1.34
CFHR3-206ENST00000617219 BHLHE41Q9C0J9 482 aaPredicted RBP6.68□□□□□ -1.34
CFHR3-206ENST00000617219 SPG7Q9UQ90 795 aa6.68□□□□□ -1.34
CFHR3-206ENST00000617219 DHX29Q7Z478 1369 aaKnown RBP6.68□□□□□ -1.34
CFHR3-206ENST00000617219 GIPC1O14908 333 aa6.67□□□□□ -1.34
CFHR3-206ENST00000617219 TRPA1O75762 1119 aa6.67□□□□□ -1.34
CFHR3-206ENST00000617219 ITGAEP38570 1179 aa6.67□□□□□ -1.34
CFHR3-206ENST00000617219 TRIM28Q13263 835 aaKnown RBP6.67□□□□□ -1.34
CFHR3-206ENST00000617219 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.67□□□□□ -1.34
CFHR3-206ENST00000617219 DMRTC2Q8IXT2 367 aaPredicted RBP6.67□□□□□ -1.34
CFHR3-206ENST00000617219 BSNDQ8WZ55 320 aa6.67□□□□□ -1.34
CFHR3-206ENST00000617219 TRIM11Q96F44 468 aa6.67□□□□□ -1.34
CFHR3-206ENST00000617219 ADAM19Q9H013 955 aa6.67□□□□□ -1.34
CFHR3-206ENST00000617219 PPME1Q9Y570 386 aa6.67□□□□□ -1.34
CFHR3-206ENST00000617219 ZMYM3Q14202 1370 aa6.67□□□□□ -1.34
CFHR3-206ENST00000617219 MIA2Q96PC5 1412 aa6.67□□□□□ -1.34
CFHR3-206ENST00000617219 KIF3BO15066 747 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 COL9A3Q14050 684 aaPredicted RBP6.66□□□□□ -1.34
CFHR3-206ENST00000617219 ZNF326Q5BKZ1 582 aaKnown RBP6.66□□□□□ -1.34
CFHR3-206ENST00000617219 CD163Q86VB7 1156 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 CCNJLQ8IV13 435 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 MAP4K3Q8IVH8 894 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 DTWD1Q8N5C7 304 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 HHIPQ96QV1 700 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 BCL2L13Q9BXK5 485 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 SRA1Q9HD15 236 aaKnown RBP6.66□□□□□ -1.34
CFHR3-206ENST00000617219 WWC3Q9ULE0 1092 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 PTPN23Q9H3S7 1636 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 FGD6Q6ZV73 1430 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 MROH2AA6NES4 1674 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 HYAL3O43820 417 aaPredicted RBP6.66□□□□□ -1.34
CFHR3-206ENST00000617219 TSPY4P0CV99 314 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 TSPY10P0CW01 314 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 XPCQ01831 940 aaPredicted RBP6.66□□□□□ -1.34
CFHR3-206ENST00000617219 SRCIN1Q9C0H9 1055 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 ZFYVE1Q9HBF4 777 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 PODXL2Q9NZ53 605 aa6.66□□□□□ -1.34
CFHR3-206ENST00000617219 MAST1Q9Y2H9 1570 aa6.65□□□□□ -1.34
CFHR3-206ENST00000617219 ABCC5O15440 1437 aa6.65□□□□□ -1.34
CFHR3-206ENST00000617219 NPATQ14207 1427 aa6.65□□□□□ -1.34
CFHR3-206ENST00000617219 PTPRKQ15262 1439 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms