RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TSPY26PQ9H489 355 aa17.33■□□□□ 0.37
CCDC43-203ENST00000588210 DIAPH3Q9NSV4 1193 aa17.33■□□□□ 0.37
CCDC43-203ENST00000588210 ECHDC1Q9NTX5 307 aa17.33■□□□□ 0.37
CCDC43-203ENST00000588210 LIMCH1Q9UPQ0 1083 aa17.33■□□□□ 0.37
CCDC43-203ENST00000588210 OFD1O75665 1012 aa17.33■□□□□ 0.36
CCDC43-203ENST00000588210 MMP14P50281 582 aa17.33■□□□□ 0.36
CCDC43-203ENST00000588210 RUFY3Q7L099 469 aa17.33■□□□□ 0.36
CCDC43-203ENST00000588210 PNMA8AQ86V59 439 aaPredicted RBP17.33■□□□□ 0.36
CCDC43-203ENST00000588210 MICALL2Q8IY33 904 aa17.33■□□□□ 0.36
CCDC43-203ENST00000588210 ADARB2Q9NS39 739 aaKnown RBP17.33■□□□□ 0.36
CCDC43-203ENST00000588210 ZNF500O60304 480 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-203ENST00000588210 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-203ENST00000588210 TBC1D22AQ8WUA7 517 aa17.32■□□□□ 0.36
CCDC43-203ENST00000588210 KCNB2Q92953 911 aa17.32■□□□□ 0.36
CCDC43-203ENST00000588210 MXD3Q9BW11 206 aa17.32■□□□□ 0.36
CCDC43-203ENST00000588210 DENND2AQ9ULE3 1009 aa17.32■□□□□ 0.36
CCDC43-203ENST00000588210 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-203ENST00000588210 USP17L8P0C7I0 530 aa17.32■□□□□ 0.36
CCDC43-203ENST00000588210 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-203ENST00000588210 CCDC158Q5M9N0 1113 aa17.32■□□□□ 0.36
CCDC43-203ENST00000588210 USP50Q70EL3 339 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-203ENST00000588210 USP48Q86UV5 1035 aa17.32■□□□□ 0.36
CCDC43-203ENST00000588210 DBNDD2Q9BQY9 259 aa17.32■□□□□ 0.36
CCDC43-203ENST00000588210 JAG2Q9Y219 1238 aa17.32■□□□□ 0.36
CCDC43-203ENST00000588210 GADD45BO75293 160 aaPredicted RBP17.31■□□□□ 0.36
CCDC43-203ENST00000588210 TOMM70O94826 608 aa17.31■□□□□ 0.36
CCDC43-203ENST00000588210 MCM5P33992 734 aa17.31■□□□□ 0.36
CCDC43-203ENST00000588210 CHAF1AQ13111 956 aaPredicted RBP17.31■□□□□ 0.36
CCDC43-203ENST00000588210 MFSD14BQ5SR56 506 aa17.31■□□□□ 0.36
CCDC43-203ENST00000588210 AACSQ86V21 672 aa17.31■□□□□ 0.36
CCDC43-203ENST00000588210 OGFOD1Q8N543 542 aa17.31■□□□□ 0.36
CCDC43-203ENST00000588210 CERS5Q8N5B7 392 aa17.31■□□□□ 0.36
CCDC43-203ENST00000588210 TM6SF1Q9BZW5 370 aa17.31■□□□□ 0.36
CCDC43-203ENST00000588210 CCDC8Q9H0W5 538 aaPredicted RBP17.31■□□□□ 0.36
CCDC43-203ENST00000588210 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.31■□□□□ 0.36
CCDC43-203ENST00000588210 DBNLQ9UJU6 430 aaKnown RBP17.31■□□□□ 0.36
CCDC43-203ENST00000588210 ZNF280AP59817 542 aaPredicted RBP17.3■□□□□ 0.36
CCDC43-203ENST00000588210 WDR66Q8TBY9 1149 aa17.3■□□□□ 0.36
CCDC43-203ENST00000588210 UQCRFS1P1P0C7P4 283 aa17.3■□□□□ 0.36
CCDC43-203ENST00000588210 ARID4AP29374 1257 aaPredicted RBP17.3■□□□□ 0.36
CCDC43-203ENST00000588210 EVI5LQ96CN4 794 aa17.3■□□□□ 0.36
CCDC43-203ENST00000588210 CCDC39Q9UFE4 941 aa17.3■□□□□ 0.36
CCDC43-203ENST00000588210 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
CCDC43-203ENST00000588210 ZKSCAN5Q9Y2L8 839 aa17.3■□□□□ 0.36
CCDC43-203ENST00000588210 PDS5AQ29RF7 1337 aaKnown RBP17.29■□□□□ 0.36
CCDC43-203ENST00000588210 MYH13Q9UKX3 1938 aa17.29■□□□□ 0.36
CCDC43-203ENST00000588210 SHTN1A0MZ66 631 aa17.29■□□□□ 0.36
CCDC43-203ENST00000588210 STX6O43752 255 aa17.29■□□□□ 0.36
CCDC43-203ENST00000588210 IFIT2P09913 472 aaKnown RBP17.29■□□□□ 0.36
CCDC43-203ENST00000588210 CASTP20810 708 aaKnown RBP17.29■□□□□ 0.36
CCDC43-203ENST00000588210 EAPPQ56P03 285 aaPredicted RBP17.29■□□□□ 0.36
CCDC43-203ENST00000588210 VPS53Q5VIR6 699 aa17.29■□□□□ 0.36
CCDC43-203ENST00000588210 KIAA0825Q8IV33 1275 aa17.29■□□□□ 0.36
CCDC43-203ENST00000588210 ZNF512BQ96KM6 892 aaPredicted RBP17.29■□□□□ 0.36
CCDC43-203ENST00000588210 GDPD2Q9HCC8 539 aa17.29■□□□□ 0.36
CCDC43-203ENST00000588210 SYT1P21579 422 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 TERF1P54274 439 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 RASGRF1Q13972 1273 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 TTC39AQ5SRH9 613 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 TLR7Q9NYK1 1049 aaKnown RBP17.28■□□□□ 0.36
CCDC43-203ENST00000588210 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 SUGT1Q9Y2Z0 365 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 F13A1P00488 732 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 PTH1RQ03431 593 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 FAM184AQ8NB25 1140 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 RBM46Q8TBY0 533 aaKnown RBP17.28■□□□□ 0.36
CCDC43-203ENST00000588210 ZSCAN31Q96LW9 406 aaPredicted RBP17.28■□□□□ 0.36
CCDC43-203ENST00000588210 ZSWIM6Q9HCJ5 1215 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 COL1A1P02452 1464 aaPredicted RBP17.28■□□□□ 0.36
CCDC43-203ENST00000588210 CCDC171Q6TFL3 1326 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 SALL1Q9NSC2 1324 aa17.28■□□□□ 0.36
CCDC43-203ENST00000588210 CCDC183Q5T5S1 534 aa17.27■□□□□ 0.36
CCDC43-203ENST00000588210 RNF214Q8ND24 703 aa17.27■□□□□ 0.36
CCDC43-203ENST00000588210 MYOZ2Q9NPC6 264 aa17.27■□□□□ 0.36
CCDC43-203ENST00000588210 SH2B1Q9NRF2 756 aaPredicted RBP17.27■□□□□ 0.36
CCDC43-203ENST00000588210 SNRKQ9NRH2 765 aa17.27■□□□□ 0.36
CCDC43-203ENST00000588210 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
CCDC43-203ENST00000588210 HIP1O00291 1037 aa17.27■□□□□ 0.35
CCDC43-203ENST00000588210 KIF4BQ2VIQ3 1234 aa17.27■□□□□ 0.35
CCDC43-203ENST00000588210 FOXD4L6Q3SYB3 417 aaPredicted RBP17.27■□□□□ 0.35
CCDC43-203ENST00000588210 FOXD4L3Q6VB84 417 aaPredicted RBP17.27■□□□□ 0.35
CCDC43-203ENST00000588210 SPATA5Q8NB90 893 aa17.27■□□□□ 0.35
CCDC43-203ENST00000588210 HMG20BQ9P0W2 317 aa17.27■□□□□ 0.35
CCDC43-203ENST00000588210 CNPY2Q9Y2B0 182 aa17.27■□□□□ 0.35
CCDC43-203ENST00000588210 F8W031 263 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-203ENST00000588210 LARGE1O95461 756 aa17.26■□□□□ 0.35
CCDC43-203ENST00000588210 POTEIP0CG38 1075 aa17.26■□□□□ 0.35
CCDC43-203ENST00000588210 POTEJP0CG39 1038 aa17.26■□□□□ 0.35
CCDC43-203ENST00000588210 UBE2HP62256 183 aa17.26■□□□□ 0.35
CCDC43-203ENST00000588210 NECTIN1Q15223 517 aa17.26■□□□□ 0.35
CCDC43-203ENST00000588210 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-203ENST00000588210 TRPM4Q8TD43 1214 aa17.26■□□□□ 0.35
CCDC43-203ENST00000588210 ZC3H15Q8WU90 426 aaKnown RBP17.26■□□□□ 0.35
CCDC43-203ENST00000588210 JAKMIP1Q96N16 626 aaKnown RBP17.26■□□□□ 0.35
CCDC43-203ENST00000588210 PDRG1Q9NUG6 133 aa17.26■□□□□ 0.35
CCDC43-203ENST00000588210 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
CCDC43-203ENST00000588210 CYP46A1Q9Y6A2 500 aa17.26■□□□□ 0.35
CCDC43-203ENST00000588210 RRP9O43818 475 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms