RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 CFAP47Q6ZTR5 3102 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 PTPRZ1P23471 2315 aaPredicted RBP3.22□□□□□ -1.89
CTC1-207ENST00000580299 ATRNL1Q5VV63 1379 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 DCHS1Q96JQ0 3298 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 UNC79Q9P2D8 2635 aa3.22□□□□□ -1.89
CTC1-207ENST00000580299 ZNF804BA4D1E1 1349 aa3.21□□□□□ -1.89
CTC1-207ENST00000580299 PLXNB2O15031 1838 aa3.21□□□□□ -1.89
CTC1-207ENST00000580299 COL11A1P12107 1806 aaPredicted RBP3.21□□□□□ -1.89
CTC1-207ENST00000580299 MYH3P11055 1940 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 MED19A0JLT2 244 aaPredicted RBP3.21□□□□□ -1.9
CTC1-207ENST00000580299 ERVV-1B6SEH8 477 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 PDHXO00330 501 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 TLL1O43897 1013 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 USP2O75604 605 aaPredicted RBP3.21□□□□□ -1.9
CTC1-207ENST00000580299 UFL1O94874 794 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 NTSR2O95665 410 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 COL6A1P12109 1028 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 CTGFP29279 349 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 RTP1P59025 263 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 GSE1Q14687 1217 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 DLGAP5Q15398 846 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 HLFQ16534 295 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 ANKRD23Q86SG2 305 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 ERO1BQ86YB8 467 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 SUGP1Q8IWZ8 645 aaKnown RBP3.21□□□□□ -1.9
CTC1-207ENST00000580299 GJD3Q8N144 294 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 PRSS33Q8NF86 280 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 ATOH1Q92858 354 aaPredicted RBP3.21□□□□□ -1.9
CTC1-207ENST00000580299 BADQ92934 168 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 KHSRPQ92945 711 aaKnown RBP eCLIP3.21□□□□□ -1.9
CTC1-207ENST00000580299 HLA-CQ95604 372 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 GMLQ99445 158 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 LGR6Q9HBX8 967 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 GGA1Q9UJY5 639 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 JAG2Q9Y219 1238 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 ATP11BQ9Y2G3 1177 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 ZNF292O60281 2723 aa3.21□□□□□ -1.9
CTC1-207ENST00000580299 FASNP49327 2511 aaKnown RBP3.21□□□□□ -1.9
CTC1-207ENST00000580299 GPR179Q6PRD1 2367 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 MAP3K15Q6ZN16 1313 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 PRRC2BQ5JSZ5 2229 aaKnown RBP3.2□□□□□ -1.9
CTC1-207ENST00000580299 CHD9Q3L8U1 2897 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 MAST4O15021 2626 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 SPDYE5A6NIY4 337 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 SNRPA1P09661 255 aaKnown RBP3.2□□□□□ -1.9
CTC1-207ENST00000580299 PIP4K2AP48426 406 aaPredicted RBP3.2□□□□□ -1.9
CTC1-207ENST00000580299 MAP3K9P80192 1104 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 PPIL2Q13356 520 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 VGLL4Q14135 290 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 NBPF20Q3BBV1 942 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 SUSD4Q5VX71 490 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 SULT6B1Q6IMI4 303 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 C3orf67Q6ZVT6 689 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 PPARGC1BQ86YN6 1023 aaKnown RBP3.2□□□□□ -1.9
CTC1-207ENST00000580299 AEBP1Q8IUX7 1158 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 TRMT44Q8IYL2 757 aaKnown RBP3.2□□□□□ -1.9
CTC1-207ENST00000580299 TBC1D16Q8TBP0 767 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 FAM212AQ96EL1 285 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 KIF12Q96FN5 646 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 CHAMP1Q96JM3 812 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 UTP14AQ9BVJ6 771 aaKnown RBP3.2□□□□□ -1.9
CTC1-207ENST00000580299 UPF3BQ9BZI7 483 aaKnown RBP3.2□□□□□ -1.9
CTC1-207ENST00000580299 SENP6Q9GZR1 1112 aaPredicted RBP3.2□□□□□ -1.9
CTC1-207ENST00000580299 MTIF3Q9H2K0 278 aaKnown RBP3.2□□□□□ -1.9
CTC1-207ENST00000580299 SLC28A3Q9HAS3 691 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 VEZTQ9HBM0 779 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 SH2B1Q9NRF2 756 aaPredicted RBP3.2□□□□□ -1.9
CTC1-207ENST00000580299 ANKIB1Q9P2G1 1089 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 POLLQ9UGP5 575 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 FAM50BQ9Y247 325 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 COL4A6Q14031 1691 aa3.2□□□□□ -1.9
CTC1-207ENST00000580299 UBN2Q6ZU65 1347 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 RIF1Q5UIP0 2472 aaKnown RBP3.19□□□□□ -1.9
CTC1-207ENST00000580299 DOCK2Q92608 1830 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 USP24Q9UPU5 2620 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 SOWAHBA6NEL2 793 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 PRR23AA6NEV1 266 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 BCRP11274 1271 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 TNNI2P48788 182 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 ATN1P54259 1190 aaPredicted RBP3.19□□□□□ -1.9
CTC1-207ENST00000580299 GPSM2P81274 684 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 FPGSQ05932 587 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 DMWDQ09019 674 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 ADGRE1Q14246 886 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 PUM1Q14671 1186 aaKnown RBP eCLIP3.19□□□□□ -1.9
CTC1-207ENST00000580299 SLC10A5Q5PT55 438 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 NBPF12Q5TAG4 269 aaPredicted RBP3.19□□□□□ -1.9
CTC1-207ENST00000580299 STRIP1Q5VSL9 837 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 MCTP2Q6DN12 878 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.19□□□□□ -1.9
CTC1-207ENST00000580299 HFE2Q6ZVN8 426 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 SMCR8Q8TEV9 937 aaPredicted RBP3.19□□□□□ -1.9
CTC1-207ENST00000580299 HOOK2Q96ED9 719 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 CARD11Q9BXL7 1154 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 FAM86C1Q9NVL1 165 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 POLKQ9UBT6 870 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 TRPC6Q9Y210 931 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 RPAP1Q9BWH6 1393 aaPredicted RBP3.19□□□□□ -1.9
CTC1-207ENST00000580299 A0A1B0GUL6 1792 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 DOCK1Q14185 1865 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms