RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TMEM67Q5HYA8 995 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ADALQ6DHV7 355 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 NFXL1Q6ZNB6 911 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SGMS1Q86VZ5 419 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 LINC00301Q8NCQ3 95 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 NKX2-3Q8TAU0 364 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 IGDCC4Q8TDY8 1250 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 NACAP1Q9BZK3 213 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 DNAJC25Q9H1X3 360 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 LY9Q9HBG7 655 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 DENND2AQ9ULE3 1009 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 PCDHA7Q9UN72 937 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CASZ1Q86V15 1759 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CNTNAP4Q9C0A0 1308 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 KIF28PB7ZC32 967 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SNAP23O00161 211 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 LIFRP42702 1097 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CTDSPL2Q05D32 466 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SF3B3Q15393 1217 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SF3A1Q15459 793 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 AKNAD1Q5T1N1 836 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ANKRD18AQ8IVF6 992 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 LCORLQ8N3X6 602 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 LINC00116Q8NCU8 138 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 STAG1Q8WVM7 1258 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 MTA3Q9BTC8 594 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 TTC12Q9H892 705 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 GNL3LQ9NVN8 582 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ANO10Q9NW15 660 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 R3HCC1Q9Y3T6 440 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CLIC4Q9Y696 253 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SLC4A4Q9Y6R1 1079 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 COL4A1P02462 1669 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 KAT6BQ8WYB5 2073 aa10.87□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ZNF804BA4D1E1 1349 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CCDC69A6NI79 296 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 IFIT3O14879 490 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SPTLC2O15270 562 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 PRKAB2O43741 272 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 POLR3DP05423 398 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CYP7A1P22680 504 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CDC27P30260 824 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CDC25BP30305 580 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 TDO2P48775 406 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 UBE4AQ14139 1066 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 IQCB1Q15051 598 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ERFEQ4G0M1 354 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ANO1Q5XXA6 986 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 KRT40Q6A162 431 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SYNE3Q6ZMZ3 975 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 PLA2G4DQ86XP0 818 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 FMR1NBQ8N0W7 255 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 MPNDQ8N594 471 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ZNF830Q96NB3 372 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 RNF41Q9H4P4 317 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SENP2Q9HC62 589 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 LRP2BPQ9P2M1 347 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 TACC3Q9Y6A5 838 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 COL24A1Q17RW2 1714 aa10.86□□□□□ -0.67
CDK5RAP3-208ENST00000578525 GOLGA6L19H0YKK7 550 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 KCNQ2O43526 872 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 FMNL1O95466 1100 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 IARSP41252 1262 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SSRP1Q08945 709 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 TRIM29Q14134 588 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 NOLC1Q14978 699 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 NTRK3Q16288 839 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SLC10A5Q5PT55 438 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SARM1Q6SZW1 724 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 MFSD6Q6ZSS7 791 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 C11orf57Q6ZUT1 292 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 MICU3Q86XE3 530 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SPC24Q8NBT2 197 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 WASF1Q92558 559 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 KCNF1Q9H3M0 494 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 FAM217BQ9NTX9 383 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SPTLC3Q9NUV7 552 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 BSDC1Q9NW68 430 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ZSWIM5Q9P217 1185 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SLC12A7Q9Y666 1083 aa10.85□□□□□ -0.67
CDK5RAP3-208ENST00000578525 MAGEB6P1A0A0J9YX57 407 aa10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 RANBP6O60518 1105 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 RXRAP19793 462 aa10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 RCAN1P53805 252 aa10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SART3Q15020 963 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SLC39A14Q15043 492 aa10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 VPS72Q15906 364 aa10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 RC3H1Q5TC82 1133 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CEP57L1Q8IYX8 460 aa10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 TRIM5Q9C035 493 aa10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 GJB4Q9NTQ9 266 aa10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 COL1A1P02452 1464 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP3-208ENST00000578525 MAST2Q6P0Q8 1798 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NHSQ6T4R5 1651 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 A0A1B0GVL5 298 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ERICH2A1L162 156 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SEMA3EO15041 775 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PPP6R2O75170 966 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms