RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 K7ELQ4 463 aaPredicted RBP6.24□□□□□ -1.41
VTI1B-203ENST00000554636 HOXD8P13378 290 aaPredicted RBP6.24□□□□□ -1.41
VTI1B-203ENST00000554636 ACPPP15309 386 aa6.24□□□□□ -1.41
VTI1B-203ENST00000554636 MZF1P28698 734 aaPredicted RBP6.24□□□□□ -1.41
VTI1B-203ENST00000554636 PDE12Q6L8Q7 609 aaKnown RBP6.24□□□□□ -1.41
VTI1B-203ENST00000554636 B4GALNT3Q6L9W6 998 aa6.24□□□□□ -1.41
VTI1B-203ENST00000554636 TXNDC11Q6PKC3 985 aa6.24□□□□□ -1.41
VTI1B-203ENST00000554636 C1orf127Q8N9H9 656 aa6.24□□□□□ -1.41
VTI1B-203ENST00000554636 TUT1Q9H6E5 874 aaKnown RBP6.24□□□□□ -1.41
VTI1B-203ENST00000554636 NRXN3Q9Y4C0 1643 aa6.24□□□□□ -1.41
VTI1B-203ENST00000554636 ADAMTS13Q76LX8 1427 aa6.24□□□□□ -1.41
VTI1B-203ENST00000554636 DIP2AQ14689 1571 aa6.23□□□□□ -1.41
VTI1B-203ENST00000554636 NKTRP30414 1462 aaKnown RBP6.23□□□□□ -1.41
VTI1B-203ENST00000554636 ADAM23O75077 832 aa6.23□□□□□ -1.41
VTI1B-203ENST00000554636 FAM13AO94988 1023 aa6.23□□□□□ -1.41
VTI1B-203ENST00000554636 CES1P23141 567 aa6.23□□□□□ -1.41
VTI1B-203ENST00000554636 FKBP4Q02790 459 aaKnown RBP eCLIP6.23□□□□□ -1.41
VTI1B-203ENST00000554636 MBTPS1Q14703 1052 aa6.23□□□□□ -1.41
VTI1B-203ENST00000554636 ALKBH2Q6NS38 261 aa6.23□□□□□ -1.41
VTI1B-203ENST00000554636 TTC9Q92623 222 aa6.23□□□□□ -1.41
VTI1B-203ENST00000554636 TPSG1Q9NRR2 321 aa6.23□□□□□ -1.41
VTI1B-203ENST00000554636 CCDC87Q9NVE4 849 aa6.23□□□□□ -1.41
VTI1B-203ENST00000554636 CHD2O14647 1828 aaKnown RBP6.22□□□□□ -1.41
VTI1B-203ENST00000554636 NEXMIFQ5QGS0 1516 aa6.22□□□□□ -1.41
VTI1B-203ENST00000554636 C9orf172C9J069 976 aa6.22□□□□□ -1.41
VTI1B-203ENST00000554636 FZD6O60353 706 aa6.22□□□□□ -1.41
VTI1B-203ENST00000554636 DEAF1O75398 565 aaPredicted RBP6.22□□□□□ -1.41
VTI1B-203ENST00000554636 TRPA1O75762 1119 aa6.22□□□□□ -1.41
VTI1B-203ENST00000554636 SMNDC1O75940 238 aaKnown RBP eCLIP6.22□□□□□ -1.41
VTI1B-203ENST00000554636 SF3B2Q13435 895 aaKnown RBP6.22□□□□□ -1.41
VTI1B-203ENST00000554636 ADAMTSL4Q6UY14 1074 aa6.22□□□□□ -1.41
VTI1B-203ENST00000554636 FBXO11Q86XK2 927 aa6.22□□□□□ -1.41
VTI1B-203ENST00000554636 GLYCTKQ8IVS8 523 aa6.22□□□□□ -1.41
VTI1B-203ENST00000554636 SETBP1Q9Y6X0 1596 aa6.22□□□□□ -1.41
VTI1B-203ENST00000554636 TMEM94Q12767 1356 aa6.21□□□□□ -1.41
VTI1B-203ENST00000554636 KIF1BO60333 1816 aa6.21□□□□□ -1.42
VTI1B-203ENST00000554636 LINC01387J3KSC0 135 aa6.21□□□□□ -1.42
VTI1B-203ENST00000554636 RPLP1P05386 114 aaKnown RBP6.21□□□□□ -1.42
VTI1B-203ENST00000554636 KCNA6P17658 529 aa6.21□□□□□ -1.42
VTI1B-203ENST00000554636 ADGRE1Q14246 886 aa6.21□□□□□ -1.42
VTI1B-203ENST00000554636 DTWD1Q8N5C7 304 aa6.21□□□□□ -1.42
VTI1B-203ENST00000554636 LENG1Q96BZ8 264 aaPredicted RBP6.21□□□□□ -1.42
VTI1B-203ENST00000554636 SLC26A8Q96RN1 970 aa6.21□□□□□ -1.42
VTI1B-203ENST00000554636 CARD10Q9BWT7 1032 aa6.21□□□□□ -1.42
VTI1B-203ENST00000554636 SEMA6BQ9H3T3 888 aa6.21□□□□□ -1.42
VTI1B-203ENST00000554636 FOXD3Q9UJU5 478 aaPredicted RBP6.21□□□□□ -1.42
VTI1B-203ENST00000554636 XRN1Q8IZH2 1706 aaKnown RBP6.2□□□□□ -1.42
VTI1B-203ENST00000554636 PTPRUQ92729 1446 aa6.2□□□□□ -1.42
VTI1B-203ENST00000554636 TOM1O60784 492 aa6.2□□□□□ -1.42
VTI1B-203ENST00000554636 PHACTR2O75167 634 aa6.2□□□□□ -1.42
VTI1B-203ENST00000554636 KIF4AO95239 1232 aa6.2□□□□□ -1.42
VTI1B-203ENST00000554636 NPR3P17342 541 aa6.2□□□□□ -1.42
VTI1B-203ENST00000554636 NRG1Q02297 640 aaPredicted RBP6.2□□□□□ -1.42
VTI1B-203ENST00000554636 ILDR2Q71H61 639 aa6.2□□□□□ -1.42
VTI1B-203ENST00000554636 TXNRD3Q86VQ6 643 aa6.2□□□□□ -1.42
VTI1B-203ENST00000554636 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.2□□□□□ -1.42
VTI1B-203ENST00000554636 PBX4Q9BYU1 374 aa6.2□□□□□ -1.42
VTI1B-203ENST00000554636 CHRDQ9H2X0 955 aa6.2□□□□□ -1.42
VTI1B-203ENST00000554636 SH2B1Q9NRF2 756 aaPredicted RBP6.2□□□□□ -1.42
VTI1B-203ENST00000554636 PPME1Q9Y570 386 aa6.2□□□□□ -1.42
VTI1B-203ENST00000554636 PIK3R4Q99570 1358 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 SETD1AO15047 1707 aaKnown RBP6.19□□□□□ -1.42
VTI1B-203ENST00000554636 FAM177BA6PVY3 158 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 EREGO14944 169 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 ICMTO60725 284 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 TNFRSF21O75509 655 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 CDC27P30260 824 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 HSPA1LP34931 641 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 IREB2P48200 963 aaKnown RBP6.19□□□□□ -1.42
VTI1B-203ENST00000554636 PIP4K2BP78356 416 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 CEP120Q8N960 986 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 HHIPQ96QV1 700 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 TBX22Q9Y458 520 aa6.19□□□□□ -1.42
VTI1B-203ENST00000554636 PPLO60437 1756 aa6.18□□□□□ -1.42
VTI1B-203ENST00000554636 SETD5Q9C0A6 1442 aa6.18□□□□□ -1.42
VTI1B-203ENST00000554636 ALX3O95076 343 aa6.18□□□□□ -1.42
VTI1B-203ENST00000554636 EPHA1P21709 976 aa6.18□□□□□ -1.42
VTI1B-203ENST00000554636 NOS3P29474 1203 aa6.18□□□□□ -1.42
VTI1B-203ENST00000554636 SETDB1Q15047 1291 aa6.18□□□□□ -1.42
VTI1B-203ENST00000554636 XKR5Q6UX68 686 aa6.18□□□□□ -1.42
VTI1B-203ENST00000554636 SNX29Q8TEQ0 813 aa6.18□□□□□ -1.42
VTI1B-203ENST00000554636 TP53INP1Q96A56 240 aa6.18□□□□□ -1.42
VTI1B-203ENST00000554636 POP1Q99575 1024 aaKnown RBP6.18□□□□□ -1.42
VTI1B-203ENST00000554636 SALL4Q9UJQ4 1053 aa6.18□□□□□ -1.42
VTI1B-203ENST00000554636 SPATA31E1Q6ZUB1 1445 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 IFT172Q9UG01 1749 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 DLL1O00548 723 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 POLR3DP05423 398 aaPredicted RBP6.17□□□□□ -1.42
VTI1B-203ENST00000554636 PTPRAP18433 802 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 USP5P45974 858 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 RSPO4Q2I0M5 234 aaPredicted RBP6.17□□□□□ -1.42
VTI1B-203ENST00000554636 IGF2-ASQ6U949 168 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 GJD3Q8N144 294 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 AGGF1Q8N302 714 aaeCLIP6.17□□□□□ -1.42
VTI1B-203ENST00000554636 GALNT11Q8NCW6 608 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 WFDC12Q8WWY7 111 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 LATS2Q9NRM7 1088 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 EGFL7Q9UHF1 273 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 BRPF3Q9ULD4 1205 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 MED1Q15648 1581 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms