RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
PNN-203ENST00000554117 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
PNN-203ENST00000554117 PHIPQ8WWQ0 1821 aa13.29□□□□□ -0.28
PNN-203ENST00000554117 MYH7P12883 1935 aa13.29□□□□□ -0.28
PNN-203ENST00000554117 CCL15-CCL14A0A0B4J2E2 113 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 HNRNPUQ00839 825 aaKnown RBP eCLIP13.28□□□□□ -0.28
PNN-203ENST00000554117 OS9Q13438 667 aaPredicted RBP13.28□□□□□ -0.28
PNN-203ENST00000554117 TAF1CQ15572 869 aaPredicted RBP13.28□□□□□ -0.28
PNN-203ENST00000554117 CCL15Q16663 113 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 ZKSCAN2Q63HK3 967 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 ATF7IPQ6VMQ6 1270 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 ATG9AQ7Z3C6 839 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 ERO1BQ86YB8 467 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 FAM151AQ8WW52 585 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 NEUROD6Q96NK8 337 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 MEIS3Q99687 375 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 ABCF2Q9UG63 623 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 TRIM17Q9Y577 477 aa13.28□□□□□ -0.28
PNN-203ENST00000554117 CETPP11597 493 aa13.27□□□□□ -0.29
PNN-203ENST00000554117 CACNB3P54284 484 aa13.27□□□□□ -0.29
PNN-203ENST00000554117 SOX10P56693 466 aa13.27□□□□□ -0.29
PNN-203ENST00000554117 SP3Q02447 781 aa13.27□□□□□ -0.29
PNN-203ENST00000554117 VGLL4Q14135 290 aa13.27□□□□□ -0.29
PNN-203ENST00000554117 ZSCAN29Q8IWY8 852 aaPredicted RBP13.27□□□□□ -0.29
PNN-203ENST00000554117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.27□□□□□ -0.29
PNN-203ENST00000554117 SALL1Q9NSC2 1324 aa13.27□□□□□ -0.29
PNN-203ENST00000554117 A0A1B0GUL7 405 aa13.26□□□□□ -0.29
PNN-203ENST00000554117 LDHCP07864 332 aa13.26□□□□□ -0.29
PNN-203ENST00000554117 GSTO1P78417 241 aa13.26□□□□□ -0.29
PNN-203ENST00000554117 SNAPC2Q13487 334 aa13.26□□□□□ -0.29
PNN-203ENST00000554117 CCDC102BQ68D86 513 aa13.26□□□□□ -0.29
PNN-203ENST00000554117 ERICH6Q7L0X2 663 aa13.26□□□□□ -0.29
PNN-203ENST00000554117 TEPSINQ96N21 525 aa13.26□□□□□ -0.29
PNN-203ENST00000554117 ZCCHC17Q9NP64 241 aaKnown RBP13.26□□□□□ -0.29
PNN-203ENST00000554117 USP40Q9NVE5 1235 aa13.26□□□□□ -0.29
PNN-203ENST00000554117 PA2G4Q9UQ80 394 aaKnown RBP13.26□□□□□ -0.29
PNN-203ENST00000554117 AOX1Q06278 1338 aa13.25□□□□□ -0.29
PNN-203ENST00000554117 PDS5AQ29RF7 1337 aaKnown RBP13.25□□□□□ -0.29
PNN-203ENST00000554117 TESPA1A2RU30 521 aaPredicted RBP13.25□□□□□ -0.29
PNN-203ENST00000554117 SPDYE5A6NIY4 337 aa13.25□□□□□ -0.29
PNN-203ENST00000554117 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
PNN-203ENST00000554117 TCP10Q12799 353 aa13.25□□□□□ -0.29
PNN-203ENST00000554117 CRHR2Q13324 411 aa13.25□□□□□ -0.29
PNN-203ENST00000554117 GRIK5Q16478 980 aa13.25□□□□□ -0.29
PNN-203ENST00000554117 DIEXFQ68CQ4 756 aaKnown RBP13.25□□□□□ -0.29
PNN-203ENST00000554117 APOBEC3HQ6NTF7 200 aaKnown RBP13.25□□□□□ -0.29
PNN-203ENST00000554117 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.25□□□□□ -0.29
PNN-203ENST00000554117 NBPF11Q86T75 865 aa13.25□□□□□ -0.29
PNN-203ENST00000554117 CLUAP1Q96AJ1 413 aa13.25□□□□□ -0.29
PNN-203ENST00000554117 EFCC1Q9HA90 598 aa13.25□□□□□ -0.29
PNN-203ENST00000554117 DAGLAQ9Y4D2 1042 aa13.25□□□□□ -0.29
PNN-203ENST00000554117 ZSWIM8A7E2V4 1837 aa13.25□□□□□ -0.29
PNN-203ENST00000554117 MS4A1P11836 297 aa13.24□□□□□ -0.29
PNN-203ENST00000554117 TRIM27P14373 513 aa13.24□□□□□ -0.29
PNN-203ENST00000554117 PRDX5P30044 214 aa13.24□□□□□ -0.29
PNN-203ENST00000554117 PHKA1P46020 1223 aa13.24□□□□□ -0.29
PNN-203ENST00000554117 PPATQ06203 517 aa13.24□□□□□ -0.29
PNN-203ENST00000554117 PPIL2Q13356 520 aa13.24□□□□□ -0.29
PNN-203ENST00000554117 MTX1Q13505 466 aa13.24□□□□□ -0.29
PNN-203ENST00000554117 XAGE2Q96GT9 111 aa13.24□□□□□ -0.29
PNN-203ENST00000554117 UQCRFS1P1P0C7P4 283 aa13.23□□□□□ -0.29
PNN-203ENST00000554117 TIMM10P62072 90 aa13.23□□□□□ -0.29
PNN-203ENST00000554117 TFCP2Q12800 502 aa13.23□□□□□ -0.29
PNN-203ENST00000554117 DIXDC1Q155Q3 683 aa13.23□□□□□ -0.29
PNN-203ENST00000554117 CCDC158Q5M9N0 1113 aa13.23□□□□□ -0.29
PNN-203ENST00000554117 CDC42EP5Q6NZY7 148 aa13.23□□□□□ -0.29
PNN-203ENST00000554117 MIGA2Q7L4E1 593 aa13.23□□□□□ -0.29
PNN-203ENST00000554117 OTOP1Q7RTM1 612 aa13.23□□□□□ -0.29
PNN-203ENST00000554117 CD99L2Q8TCZ2 262 aa13.23□□□□□ -0.29
PNN-203ENST00000554117 ZKSCAN4Q969J2 545 aaPredicted RBP13.23□□□□□ -0.29
PNN-203ENST00000554117 PICK1Q9NRD5 415 aa13.23□□□□□ -0.29
PNN-203ENST00000554117 ZBTB22O15209 634 aa13.22□□□□□ -0.29
PNN-203ENST00000554117 ENTPD3O75355 529 aa13.22□□□□□ -0.29
PNN-203ENST00000554117 MAP4K4O95819 1239 aaPredicted RBP13.22□□□□□ -0.29
PNN-203ENST00000554117 GJA5P36382 358 aa13.22□□□□□ -0.29
PNN-203ENST00000554117 TTC39AQ5SRH9 613 aa13.22□□□□□ -0.29
PNN-203ENST00000554117 TMEM106CQ9BVX2 250 aa13.22□□□□□ -0.29
PNN-203ENST00000554117 RAI14Q9P0K7 980 aa13.22□□□□□ -0.29
PNN-203ENST00000554117 NAV1Q8NEY1 1877 aa13.22□□□□□ -0.29
PNN-203ENST00000554117 LOC285556D6RIA3 1793 aa13.22□□□□□ -0.29
PNN-203ENST00000554117 MROH7-TTC4A0A0A0MT08 1334 aa13.21□□□□□ -0.29
PNN-203ENST00000554117 BCAR3O75815 825 aa13.21□□□□□ -0.29
PNN-203ENST00000554117 GNRH1P01148 92 aa13.21□□□□□ -0.29
PNN-203ENST00000554117 ADORA1P30542 326 aa13.21□□□□□ -0.29
PNN-203ENST00000554117 ITPRIPQ8IWB1 547 aa13.21□□□□□ -0.29
PNN-203ENST00000554117 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.29
PNN-203ENST00000554117 LRP2BPQ9P2M1 347 aa13.21□□□□□ -0.29
PNN-203ENST00000554117 SNCAIPQ9Y6H5 919 aa13.21□□□□□ -0.29
PNN-203ENST00000554117 TNRC18O15417 2968 aaPredicted RBP13.2□□□□□ -0.3
PNN-203ENST00000554117 IRF6O14896 467 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 BAG3O95817 575 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 HOXD10P28358 340 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 BTDP43251 543 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 RGS3P49796 1198 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 PICALMQ13492 652 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 RASGRF1Q13972 1273 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 SLC9C1Q4G0N8 1177 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 CDAN1Q8IWY9 1227 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms