RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 KIDINS220Q9ULH0 1771 aa12.52□□□□□ -0.41
MRPS35-204ENST00000542199 EPHA1P21709 976 aa12.52□□□□□ -0.41
MRPS35-204ENST00000542199 HNRNPMP52272 730 aaKnown RBP eCLIP12.52□□□□□ -0.41
MRPS35-204ENST00000542199 VN1R5Q7Z5H4 357 aa12.52□□□□□ -0.41
MRPS35-204ENST00000542199 ADAM19Q9H013 955 aa12.52□□□□□ -0.41
MRPS35-204ENST00000542199 TTF2Q9UNY4 1162 aaKnown RBP12.52□□□□□ -0.41
MRPS35-204ENST00000542199 LILRB5O75023 590 aa12.51□□□□□ -0.41
MRPS35-204ENST00000542199 HOXB4P17483 251 aaPredicted RBP12.51□□□□□ -0.41
MRPS35-204ENST00000542199 CDC25BP30305 580 aa12.51□□□□□ -0.41
MRPS35-204ENST00000542199 BAG6P46379 1132 aa12.51□□□□□ -0.41
MRPS35-204ENST00000542199 CEBPAP49715 358 aaPredicted RBP12.51□□□□□ -0.41
MRPS35-204ENST00000542199 HSPA2P54652 639 aa12.51□□□□□ -0.41
MRPS35-204ENST00000542199 MAP3K10Q02779 954 aa12.51□□□□□ -0.41
MRPS35-204ENST00000542199 FAAP100Q0VG06 881 aa12.51□□□□□ -0.41
MRPS35-204ENST00000542199 SPAG9O60271 1321 aaKnown RBP12.51□□□□□ -0.41
MRPS35-204ENST00000542199 TCF3P15923 654 aa12.5□□□□□ -0.41
MRPS35-204ENST00000542199 CDC27P30260 824 aa12.5□□□□□ -0.41
MRPS35-204ENST00000542199 TIAM1Q13009 1591 aa12.5□□□□□ -0.41
MRPS35-204ENST00000542199 ZNF644Q9H582 1327 aaPredicted RBP12.49□□□□□ -0.41
MRPS35-204ENST00000542199 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
MRPS35-204ENST00000542199 WIPF1O43516 503 aa12.49□□□□□ -0.41
MRPS35-204ENST00000542199 XRCC5P13010 732 aaKnown RBP12.49□□□□□ -0.41
MRPS35-204ENST00000542199 LORP23490 312 aaPredicted RBP12.49□□□□□ -0.41
MRPS35-204ENST00000542199 DGKGP49619 791 aa12.49□□□□□ -0.41
MRPS35-204ENST00000542199 FANCCQ00597 558 aa12.49□□□□□ -0.41
MRPS35-204ENST00000542199 COL9A3Q14050 684 aaPredicted RBP12.49□□□□□ -0.41
MRPS35-204ENST00000542199 TXNDC11Q6PKC3 985 aa12.49□□□□□ -0.41
MRPS35-204ENST00000542199 TPTE2Q6XPS3 522 aa12.49□□□□□ -0.41
MRPS35-204ENST00000542199 IL22RA1Q8N6P7 574 aa12.49□□□□□ -0.41
MRPS35-204ENST00000542199 MBD5Q9P267 1494 aa12.48□□□□□ -0.41
MRPS35-204ENST00000542199 USP31Q70CQ4 1352 aa12.48□□□□□ -0.41
MRPS35-204ENST00000542199 SCAMP3O14828 347 aaKnown RBP12.48□□□□□ -0.41
MRPS35-204ENST00000542199 PTPN12Q05209 780 aaKnown RBP12.48□□□□□ -0.41
MRPS35-204ENST00000542199 TAF1CQ15572 869 aaPredicted RBP12.48□□□□□ -0.41
MRPS35-204ENST00000542199 C9orf131Q5VYM1 1079 aa12.48□□□□□ -0.41
MRPS35-204ENST00000542199 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
MRPS35-204ENST00000542199 ATP7AQ04656 1500 aa12.47□□□□□ -0.41
MRPS35-204ENST00000542199 VPS8Q8N3P4 1428 aa12.47□□□□□ -0.41
MRPS35-204ENST00000542199 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
MRPS35-204ENST00000542199 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
MRPS35-204ENST00000542199 HDLBPQ00341 1268 aaKnown RBP12.47□□□□□ -0.41
MRPS35-204ENST00000542199 CLEC4MQ9H2X3 399 aaPredicted RBP12.47□□□□□ -0.41
MRPS35-204ENST00000542199 RRAGCQ9HB90 399 aa12.47□□□□□ -0.41
MRPS35-204ENST00000542199 INO80Q9ULG1 1556 aaPredicted RBP12.47□□□□□ -0.41
MRPS35-204ENST00000542199 CNTLNQ9NXG0 1405 aa12.46□□□□□ -0.41
MRPS35-204ENST00000542199 NID1P14543 1247 aa12.46□□□□□ -0.41
MRPS35-204ENST00000542199 PCDH1Q08174 1060 aa12.46□□□□□ -0.41
MRPS35-204ENST00000542199 ZNF423Q2M1K9 1284 aa12.46□□□□□ -0.41
MRPS35-204ENST00000542199 HGSNATQ68CP4 663 aa12.46□□□□□ -0.41
MRPS35-204ENST00000542199 PRDM6Q9NQX0 595 aa12.46□□□□□ -0.41
MRPS35-204ENST00000542199 PPM1HQ9ULR3 514 aa12.46□□□□□ -0.41
MRPS35-204ENST00000542199 PLXNC1O60486 1568 aa12.46□□□□□ -0.42
MRPS35-204ENST00000542199 NCOA2Q15596 1464 aa12.46□□□□□ -0.42
MRPS35-204ENST00000542199 ST13P50502 369 aaKnown RBP12.45□□□□□ -0.42
MRPS35-204ENST00000542199 SNRPNP63162 240 aaKnown RBP12.45□□□□□ -0.42
MRPS35-204ENST00000542199 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
MRPS35-204ENST00000542199 WFDC8Q8IUA0 241 aa12.45□□□□□ -0.42
MRPS35-204ENST00000542199 TRIM56Q9BRZ2 755 aaKnown RBP12.45□□□□□ -0.42
MRPS35-204ENST00000542199 SEC31BQ9NQW1 1179 aa12.45□□□□□ -0.42
MRPS35-204ENST00000542199 A2MP01023 1474 aa12.45□□□□□ -0.42
MRPS35-204ENST00000542199 LINC01387J3KSC0 135 aa12.44□□□□□ -0.42
MRPS35-204ENST00000542199 CELA3AP09093 270 aa12.44□□□□□ -0.42
MRPS35-204ENST00000542199 ESRRAP11474 423 aaPredicted RBP12.44□□□□□ -0.42
MRPS35-204ENST00000542199 ZNF76P36508 570 aa12.44□□□□□ -0.42
MRPS35-204ENST00000542199 GPN3Q9UHW5 284 aaPredicted RBP12.44□□□□□ -0.42
MRPS35-204ENST00000542199 RTEL1-TNFRSF6BF6WH68 1400 aa12.44□□□□□ -0.42
MRPS35-204ENST00000542199 UHRF1BP1Q6BDS2 1440 aa12.44□□□□□ -0.42
MRPS35-204ENST00000542199 PREX1Q8TCU6 1659 aa12.43□□□□□ -0.42
MRPS35-204ENST00000542199 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
MRPS35-204ENST00000542199 H3BRJ5 948 aa12.43□□□□□ -0.42
MRPS35-204ENST00000542199 CCDC85BQ15834 202 aaPredicted RBP12.43□□□□□ -0.42
MRPS35-204ENST00000542199 RPS26P11Q5JNZ5 115 aaPredicted RBP12.43□□□□□ -0.42
MRPS35-204ENST00000542199 METTL16Q86W50 562 aaKnown RBP12.43□□□□□ -0.42
MRPS35-204ENST00000542199 DMRTC2Q8IXT2 367 aaPredicted RBP12.43□□□□□ -0.42
MRPS35-204ENST00000542199 PPME1Q9Y570 386 aa12.43□□□□□ -0.42
MRPS35-204ENST00000542199 SETD1BQ9UPS6 1966 aaKnown RBP12.43□□□□□ -0.42
MRPS35-204ENST00000542199 LRRC9Q6ZRR7 1453 aa12.42□□□□□ -0.42
MRPS35-204ENST00000542199 SOX1O00570 391 aaPredicted RBP12.42□□□□□ -0.42
MRPS35-204ENST00000542199 IKBKEQ14164 716 aa12.42□□□□□ -0.42
MRPS35-204ENST00000542199 ANKRD24Q8TF21 1146 aa12.42□□□□□ -0.42
MRPS35-204ENST00000542199 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
MRPS35-204ENST00000542199 CARD10Q9BWT7 1032 aa12.42□□□□□ -0.42
MRPS35-204ENST00000542199 ENAMQ9NRM1 1142 aa12.42□□□□□ -0.42
MRPS35-204ENST00000542199 METTL5Q9NRN9 209 aaKnown RBP12.42□□□□□ -0.42
MRPS35-204ENST00000542199 CAMSAP2Q08AD1 1489 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 F6X3S4 739 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 ENC1O14682 589 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 PAGE1O75459 146 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 B3GALT4O96024 378 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 CABP4P57796 275 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 SUPT6HQ7KZ85 1726 aaKnown RBP12.41□□□□□ -0.42
MRPS35-204ENST00000542199 CACTIN-AS1Q8N1I8 211 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 SLC7A3Q8WY07 619 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 RNF34Q969K3 372 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 NECAB3Q96P71 396 aaPredicted RBP12.41□□□□□ -0.42
MRPS35-204ENST00000542199 ZFYVE1Q9HBF4 777 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 C3P01024 1663 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 MAP3K1Q13233 1512 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 ZMYM3Q14202 1370 aa12.41□□□□□ -0.42
MRPS35-204ENST00000542199 CCDC141Q6ZP82 1450 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms