RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 HCN4Q9Y3Q4 1203 aa7.4□□□□□ -1.22
CHEK1-216ENST00000534070 DENND4BO75064 1496 aaPredicted RBP7.4□□□□□ -1.22
CHEK1-216ENST00000534070 MINDY4BA8MYZ0 360 aa7.4□□□□□ -1.22
CHEK1-216ENST00000534070 SMAPO00193 183 aa7.4□□□□□ -1.22
CHEK1-216ENST00000534070 CBFA2T2O43439 604 aa7.4□□□□□ -1.22
CHEK1-216ENST00000534070 RASGRP1O95267 797 aa7.4□□□□□ -1.22
CHEK1-216ENST00000534070 SARSP49591 514 aaKnown RBP7.4□□□□□ -1.22
CHEK1-216ENST00000534070 LARP1BQ659C4 914 aaKnown RBP7.4□□□□□ -1.22
CHEK1-216ENST00000534070 PPHLN1Q8NEY8 458 aaKnown RBP7.4□□□□□ -1.22
CHEK1-216ENST00000534070 RRAGDQ9NQL2 400 aaPredicted RBP7.4□□□□□ -1.22
CHEK1-216ENST00000534070 CHMP3Q9Y3E7 222 aa7.4□□□□□ -1.22
CHEK1-216ENST00000534070 SETBP1Q9Y6X0 1596 aa7.4□□□□□ -1.22
CHEK1-216ENST00000534070 CDK13Q14004 1512 aaKnown RBP7.4□□□□□ -1.23
CHEK1-216ENST00000534070 A0A1W2PRQ8 180 aa7.4□□□□□ -1.23
CHEK1-216ENST00000534070 BICDL2A1A5D9 508 aa7.4□□□□□ -1.23
CHEK1-216ENST00000534070 U2AF1L5P0DN76 240 aaPredicted RBP7.4□□□□□ -1.23
CHEK1-216ENST00000534070 CTHP32929 405 aa7.4□□□□□ -1.23
CHEK1-216ENST00000534070 U2AF1Q01081 240 aaKnown RBP eCLIP7.4□□□□□ -1.238e-7■□□□□ 8.6
CHEK1-216ENST00000534070 STK3Q13188 491 aa7.4□□□□□ -1.23
CHEK1-216ENST00000534070 EML3Q32P44 896 aa7.4□□□□□ -1.23
CHEK1-216ENST00000534070 NBPF20Q3BBV1 942 aa7.4□□□□□ -1.23
CHEK1-216ENST00000534070 ALFQ53S48 1182 aa7.4□□□□□ -1.23
CHEK1-216ENST00000534070 FRAT1Q92837 279 aaPredicted RBP7.4□□□□□ -1.23
CHEK1-216ENST00000534070 SPON2Q9BUD6 331 aa7.4□□□□□ -1.23
CHEK1-216ENST00000534070 PPT2Q9UMR5 302 aa7.4□□□□□ -1.23
CHEK1-216ENST00000534070 ZNF180Q9UJW8 692 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 TNFRSF21O75509 655 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 MTA2O94776 668 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 OAS2P29728 719 aaKnown RBP7.39□□□□□ -1.23
CHEK1-216ENST00000534070 STAT3P40763 770 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 WASHC5Q12768 1159 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 ZNF713Q8N859 430 aaPredicted RBP7.39□□□□□ -1.23
CHEK1-216ENST00000534070 PDGFDQ9GZP0 370 aaPredicted RBP7.39□□□□□ -1.23
CHEK1-216ENST00000534070 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.39□□□□□ -1.23
CHEK1-216ENST00000534070 LRRC7Q96NW7 1537 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 ERICH4A6NGS2 130 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 SMAD7O15105 426 aaKnown RBP7.39□□□□□ -1.23
CHEK1-216ENST00000534070 MMP14P50281 582 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 C6orf118Q5T5N4 469 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 C1orf228Q6PIY5 440 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 TRAF7Q6Q0C0 670 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 PNMA1Q8ND90 353 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 USP33Q8TEY7 942 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 COG1Q8WTW3 980 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 LRGUKQ96M69 825 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 OSBPL7Q9BZF2 842 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 CDH19Q9H159 772 aa7.39□□□□□ -1.23
CHEK1-216ENST00000534070 PRRT4C9JH25 899 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 ELL2O00472 640 aaPredicted RBP7.38□□□□□ -1.23
CHEK1-216ENST00000534070 TMEM127O75204 238 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 ATICP31939 592 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 LMNB2Q03252 620 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 CHAF1AQ13111 956 aaPredicted RBP7.38□□□□□ -1.23
CHEK1-216ENST00000534070 PIN1Q13526 163 aaPredicted RBP7.38□□□□□ -1.23
CHEK1-216ENST00000534070 NBPF6Q5VWK0 638 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 USPL1Q5W0Q7 1092 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 SLAIN1Q8ND83 568 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 TBC1D20Q96BZ9 403 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 NBPF4Q96M43 638 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 ATG3Q9NT62 314 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 RAB3GAP2Q9H2M9 1393 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 ECEL1O95672 775 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 CLK1P49759 484 aaKnown RBP7.38□□□□□ -1.23
CHEK1-216ENST00000534070 PLA2R1Q13018 1463 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 CFAP161Q6P656 301 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 CD109Q6YHK3 1445 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 TRPM4Q8TD43 1214 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 ADAMTS1Q9UHI8 967 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 NHSL1Q5SYE7 1610 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 NPATQ14207 1427 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 PPP2R5CQ13362 524 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 TRMT2BQ96GJ1 504 aaKnown RBP7.38□□□□□ -1.23
CHEK1-216ENST00000534070 VPS45Q9NRW7 570 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 GTF2A1LQ9UNN4 478 aa7.38□□□□□ -1.23
CHEK1-216ENST00000534070 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.37□□□□□ -1.23
CHEK1-216ENST00000534070 GPATCH4Q5T3I0 446 aaKnown RBP7.37□□□□□ -1.23
CHEK1-216ENST00000534070 JARID2Q92833 1246 aaPredicted RBP7.37□□□□□ -1.23
CHEK1-216ENST00000534070 MKL1Q969V6 931 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 MAP10Q9P2G4 905 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 USP25Q9UHP3 1055 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 A0A087X0B3 334 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 B2RBV5 119 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 STRN3Q13033 797 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 RASSF3Q86WH2 238 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 SIX5Q8N196 739 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 RELTQ969Z4 430 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 DDX20Q9UHI6 824 aaKnown RBP7.37□□□□□ -1.23
CHEK1-216ENST00000534070 MAPK8IP1Q9UQF2 711 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 AK5Q9Y6K8 562 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 CICQ96RK0 1608 aaPredicted RBP7.37□□□□□ -1.23
CHEK1-216ENST00000534070 CCNB3Q8WWL7 1395 aa7.37□□□□□ -1.23
CHEK1-216ENST00000534070 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.36□□□□□ -1.23
CHEK1-216ENST00000534070 FAM180BQ6P0A1 224 aa7.36□□□□□ -1.23
CHEK1-216ENST00000534070 SMAP1Q8IYB5 467 aaPredicted RBP7.36□□□□□ -1.23
CHEK1-216ENST00000534070 CHAC2Q8WUX2 184 aa7.36□□□□□ -1.23
CHEK1-216ENST00000534070 KIFC2Q96AC6 838 aa7.36□□□□□ -1.23
CHEK1-216ENST00000534070 NRKQ7Z2Y5 1582 aa7.36□□□□□ -1.23
CHEK1-216ENST00000534070 RPRD2Q5VT52 1461 aaKnown RBP7.36□□□□□ -1.23
CHEK1-216ENST00000534070 MTUS2Q5JR59 1369 aa7.36□□□□□ -1.23
CHEK1-216ENST00000534070 WEE1P30291 646 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms