RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 DDX60Q8IY21 1712 aaKnown RBP7.28□□□□□ -1.24
CHKA-204ENST00000528235 GNAT3A8MTJ3 354 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 BMP2P12643 396 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 FSHRP23945 695 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 TNIP1Q15025 636 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 C6orf118Q5T5N4 469 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 SH3BP5LQ7L8J4 393 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 ZSCAN1Q8NBB4 408 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 SUPT20HQ8NEM7 779 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 VPS33BQ9H267 617 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 CNOT7Q9UIV1 285 aaKnown RBP7.28□□□□□ -1.24
CHKA-204ENST00000528235 USP16Q9Y5T5 823 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 BTBD11A6QL63 1104 aa7.27□□□□□ -1.25
CHKA-204ENST00000528235 FAM155AB1AL88 458 aaPredicted RBP7.27□□□□□ -1.25
CHKA-204ENST00000528235 HIRAP54198 1017 aaPredicted RBP7.27□□□□□ -1.25
CHKA-204ENST00000528235 ERICH6BQ5W0A0 696 aa7.27□□□□□ -1.25
CHKA-204ENST00000528235 LINC00528Q8N1L1 170 aa7.27□□□□□ -1.25
CHKA-204ENST00000528235 DCPSQ96C86 337 aaKnown RBP7.27□□□□□ -1.25
CHKA-204ENST00000528235 CSRNP1Q96S65 589 aa7.27□□□□□ -1.25
CHKA-204ENST00000528235 PANK3Q9H999 370 aa7.27□□□□□ -1.25
CHKA-204ENST00000528235 KIAA0100Q14667 2235 aaKnown RBP7.27□□□□□ -1.25
CHKA-204ENST00000528235 RAD17O75943 681 aa7.26□□□□□ -1.25
CHKA-204ENST00000528235 CRY2Q49AN0 593 aa7.26□□□□□ -1.25
CHKA-204ENST00000528235 KRT26Q7Z3Y9 468 aa7.26□□□□□ -1.25
CHKA-204ENST00000528235 MEIOBQ8N635 442 aa7.26□□□□□ -1.25
CHKA-204ENST00000528235 IL17REQ8NFR9 667 aa7.26□□□□□ -1.25
CHKA-204ENST00000528235 GAS2L2Q8NHY3 880 aa7.26□□□□□ -1.25
CHKA-204ENST00000528235 TRPM4Q8TD43 1214 aa7.26□□□□□ -1.25
CHKA-204ENST00000528235 CRAMP1Q96RY5 1269 aa7.26□□□□□ -1.25
CHKA-204ENST00000528235 TSEN34Q9BSV6 310 aaKnown RBP7.26□□□□□ -1.25
CHKA-204ENST00000528235 DLL1O00548 723 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 KCNQ3O43525 872 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 DIAPH1O60610 1272 aaKnown RBP7.25□□□□□ -1.25
CHKA-204ENST00000528235 SNRPA1P09661 255 aaKnown RBP7.25□□□□□ -1.25
CHKA-204ENST00000528235 HOXA10P31260 410 aaPredicted RBP7.25□□□□□ -1.25
CHKA-204ENST00000528235 FXR1P51114 621 aaKnown RBP eCLIP7.25□□□□□ -1.25
CHKA-204ENST00000528235 CTDSPL2Q05D32 466 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 SKIV2LQ15477 1246 aaKnown RBP7.25□□□□□ -1.25
CHKA-204ENST00000528235 HLFQ16534 295 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 FBXO46Q6PJ61 603 aaPredicted RBP7.25□□□□□ -1.25
CHKA-204ENST00000528235 DLK2Q6UY11 383 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 DPP8Q6V1X1 898 aaPredicted RBP7.25□□□□□ -1.25
CHKA-204ENST00000528235 CCDC116Q8IYX3 515 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 ZNF296Q8WUU4 475 aaPredicted RBP7.25□□□□□ -1.25
CHKA-204ENST00000528235 CDV3Q9UKY7 258 aaKnown RBP7.25□□□□□ -1.25
CHKA-204ENST00000528235 KNSTRNQ9Y448 316 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 GTF3C3Q9Y5Q9 886 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 DLG5Q8TDM6 1919 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 ERBB4Q15303 1308 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 KIF7Q2M1P5 1343 aa7.25□□□□□ -1.25
CHKA-204ENST00000528235 ABCC12Q96J65 1359 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 PRAMEF22A3QJZ6 481 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 SOBPA7XYQ1 873 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 TBC1D8O95759 1140 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 TBC1D10BQ4KMP7 808 aaPredicted RBP7.24□□□□□ -1.25
CHKA-204ENST00000528235 PDXDC2PQ6P474 469 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 NGEFQ8N5V2 710 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 NLRP3Q96P20 1036 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 PGPEP1Q9NXJ5 209 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 ATP6V0A2Q9Y487 856 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 RIC1Q4ADV7 1423 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 PSME4Q14997 1843 aa7.24□□□□□ -1.25
CHKA-204ENST00000528235 CEP290O15078 2479 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 SHTN1A0MZ66 631 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 ADM5C9JUS6 153 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 U2SURPO15042 1029 aaKnown RBP7.23□□□□□ -1.25
CHKA-204ENST00000528235 VSIG8P0DPA2 414 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 GPTP24298 496 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 PDE4CQ08493 712 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 KIAA2012Q0VF49 1180 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 TAF7LQ5H9L4 462 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 KIF6Q6ZMV9 814 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 DPF2Q92785 391 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 DDRGK1Q96HY6 314 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 ARHGAP9Q9BRR9 750 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 FKBPLQ9UIM3 349 aa7.23□□□□□ -1.25
CHKA-204ENST00000528235 ERVV-1B6SEH8 477 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 GPR25O00155 361 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 FKTNO75072 461 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 DHX9Q08211 1270 aaKnown RBP7.22□□□□□ -1.25
CHKA-204ENST00000528235 INTS3Q68E01 1043 aaKnown RBP7.22□□□□□ -1.25
CHKA-204ENST00000528235 NBPF10Q6P3W6 841 aaKnown RBP7.22□□□□□ -1.25
CHKA-204ENST00000528235 PPP1R42Q7Z4L9 355 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 ZBTB33Q86T24 672 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 SLC51AQ86UW1 340 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 RASAL3Q86YV0 1011 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 SP8Q8IXZ3 490 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 SLC17A8Q8NDX2 589 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 RTF1Q92541 710 aaKnown RBP7.22□□□□□ -1.25
CHKA-204ENST00000528235 SLC10A4Q96EP9 437 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 RTFDC1Q9BY42 306 aaPredicted RBP7.22□□□□□ -1.25
CHKA-204ENST00000528235 SCN9AQ15858 1988 aa7.22□□□□□ -1.25
CHKA-204ENST00000528235 PSMD14O00487 310 aa7.21□□□□□ -1.26
CHKA-204ENST00000528235 BBOX1O75936 387 aa7.21□□□□□ -1.26
CHKA-204ENST00000528235 SH3D19Q5HYK7 790 aa7.21□□□□□ -1.26
CHKA-204ENST00000528235 SUSD4Q5VX71 490 aa7.21□□□□□ -1.26
CHKA-204ENST00000528235 PNMA1Q8ND90 353 aa7.21□□□□□ -1.26
CHKA-204ENST00000528235 CDCA5Q96FF9 252 aa7.21□□□□□ -1.26
CHKA-204ENST00000528235 TRIOBPQ9H2D6 2365 aa7.21□□□□□ -1.26
CHKA-204ENST00000528235 ABCC4O15439 1325 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms