RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 ITGA6P23229 1130 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 ARHGAP25P42331 645 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 PLS1Q14651 629 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 SLC5A4Q9NY91 659 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 DACT1Q9NYF0 836 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 CNPY2Q9Y2B0 182 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 ZNF500O60304 480 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 CYLC1P35663 651 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 LRCH2Q5VUJ6 765 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 CCDC129Q6ZRS4 1044 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 TTC14Q96N46 770 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 BCL2L12Q9HB09 334 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 NDUFAB1O14561 156 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 DLGAP5Q15398 846 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 RMND1Q9NWS8 449 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 INSRP06213 1382 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 KLF18A0A0U1RQI7 1052 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 CCDC172P0C7W6 258 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 HOOK3Q86VS8 718 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 STMN4Q9H169 189 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 CDC42BPAQ5VT25 1732 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 DKC1O60832 514 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 NAPAP54920 295 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 PPFIBP2Q8ND30 876 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 LPIN2Q92539 896 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 STIM2Q9P246 746 aa13.82□□□□□ -0.2
PCDHGA6-201ENST00000517434 KIF24Q5T7B8 1368 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 PDE1AP54750 535 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 DCAF15Q66K64 600 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 FEZ2Q9UHY8 353 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 N4BP3O15049 544 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 PPIP5K2O43314 1243 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 IDEP14735 1019 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 PABPC4Q13310 644 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 AP1ARQ63HQ0 302 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 FAM89AQ96GI7 184 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 LUC7L2Q9Y383 392 aaKnown RBP13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 ATP2B4P23634 1241 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 BCS1LQ9Y276 419 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 KDM5CP41229 1560 aa13.81□□□□□ -0.2
PCDHGA6-201ENST00000517434 GUCY1B3Q02153 619 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 CWF19L2Q2TBE0 894 aaKnown RBP13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 CC2D2BQ6DHV5 1058 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 AOPEPQ8N6M6 819 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 CTAGE1Q96RT6 745 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 FERMT1Q9BQL6 677 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 RPS8P62241 208 aaKnown RBP13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 SPAG1Q07617 926 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 MAGEB6Q8N7X4 407 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 AKR1B10O60218 316 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 VAV2P52735 878 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 CCT2P78371 535 aaKnown RBP13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 UNC5CLQ8IV45 518 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 HELBQ8NG08 1087 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 BICD1Q96G01 975 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 CFAP57Q96MR6 1250 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 CHL1O00533 1208 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 KIF3CO14782 793 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 MTIF2P46199 727 aaKnown RBP13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 IFI16Q16666 785 aaKnown RBP13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 HELLSQ9NRZ9 838 aa13.8□□□□□ -0.2
PCDHGA6-201ENST00000517434 PHKG2P15735 406 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 MAP3K9P80192 1104 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 NUCB1Q02818 461 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 KIF22Q14807 665 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 ELF2Q15723 593 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 TACC1O75410 805 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 OTUD7BQ6GQQ9 843 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 MIPOL1Q8TD10 442 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 DDX12PQ92771 950 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 AS3MTQ9HBK9 375 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 SAMD15Q9P1V8 674 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 CSADQ9Y600 493 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 F13A1P00488 732 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 RHOXF2BP0C7M4 288 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 TUBB2AQ13885 445 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 IFT74Q96LB3 600 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 RHOXF2Q9BQY4 288 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 TUBB2BQ9BVA1 445 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 CFAP58Q5T655 872 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 HEATR3Q7Z4Q2 680 aa13.79□□□□□ -0.2
PCDHGA6-201ENST00000517434 PCK1P35558 622 aa13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 C2CD5Q86YS7 1000 aa13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 GPHNQ9NQX3 736 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 PUF60Q9UHX1 559 aaKnown RBP13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 HECW2Q9P2P5 1572 aa13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 CCDC40Q4G0X9 1142 aa13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 RNF168Q8IYW5 571 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 TTC37Q6PGP7 1564 aa13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 PREX2Q70Z35 1606 aa13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 A1BGP04217 495 aa13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 KIAA0753Q2KHM9 967 aa13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 RPAINQ86UA6 219 aa13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 STK24Q9Y6E0 443 aa13.78□□□□□ -0.2
PCDHGA6-201ENST00000517434 CHD1O14646 1710 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms