RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 SPTLC3Q9NUV7 552 aa20.3■□□□□ 0.84
RRP1-202ENST00000471909 ANGEL1Q9UNK9 670 aaKnown RBP20.3■□□□□ 0.84
RRP1-202ENST00000471909 PNPLA7Q6ZV29 1317 aa20.3■□□□□ 0.84
RRP1-202ENST00000471909 NLRP3Q96P20 1036 aa20.3■□□□□ 0.84
RRP1-202ENST00000471909 DHX16O60231 1041 aaKnown RBP20.29■□□□□ 0.84
RRP1-202ENST00000471909 GUCY1B3Q02153 619 aa20.29■□□□□ 0.84
RRP1-202ENST00000471909 MIGA1Q8NAN2 632 aa20.29■□□□□ 0.84
RRP1-202ENST00000471909 SH2B2O14492 632 aaPredicted RBP20.29■□□□□ 0.84
RRP1-202ENST00000471909 RPS8P62241 208 aaKnown RBP20.29■□□□□ 0.84
RRP1-202ENST00000471909 CTDSPL2Q05D32 466 aa20.29■□□□□ 0.84
RRP1-202ENST00000471909 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
RRP1-202ENST00000471909 PGBD1Q96JS3 809 aa20.29■□□□□ 0.84
RRP1-202ENST00000471909 GNL3LQ9NVN8 582 aaKnown RBP20.29■□□□□ 0.84
RRP1-202ENST00000471909 TACC3Q9Y6A5 838 aa20.29■□□□□ 0.84
RRP1-202ENST00000471909 COL1A1P02452 1464 aaPredicted RBP20.29■□□□□ 0.84
RRP1-202ENST00000471909 PLCB2Q00722 1185 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 TPTE2Q6XPS3 522 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 ADGRA1Q86SQ6 560 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 FAM84BQ96KN1 310 aaPredicted RBP20.28■□□□□ 0.84
RRP1-202ENST00000471909 FUCA2Q9BTY2 467 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 ABCF2Q9UG63 623 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 CFAP45Q9UL16 551 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 SLC4A4Q9Y6R1 1079 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 GOLGA6L4A6NEF3 574 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 GNAT2P19087 354 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 CAVIN4Q5BKX8 364 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 KLHL34Q8N239 644 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 TSC1Q92574 1164 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 SENP2Q9HC62 589 aa20.28■□□□□ 0.84
RRP1-202ENST00000471909 ZNF710Q8N1W2 664 aa20.27■□□□□ 0.84
RRP1-202ENST00000471909 IGDCC4Q8TDY8 1250 aa20.27■□□□□ 0.84
RRP1-202ENST00000471909 CYP7A1P22680 504 aa20.27■□□□□ 0.84
RRP1-202ENST00000471909 ILDR1Q86SU0 546 aaPredicted RBP20.27■□□□□ 0.84
RRP1-202ENST00000471909 A0A1B0GUL6 1792 aa20.27■□□□□ 0.84
RRP1-202ENST00000471909 CASZ1Q86V15 1759 aa20.27■□□□□ 0.84
RRP1-202ENST00000471909 AFF2P51816 1311 aa20.27■□□□□ 0.83
RRP1-202ENST00000471909 COL24A1Q17RW2 1714 aa20.27■□□□□ 0.83
RRP1-202ENST00000471909 CPLX1O14810 134 aa20.26■□□□□ 0.83
RRP1-202ENST00000471909 ONECUT3O60422 494 aaPredicted RBP20.26■□□□□ 0.83
RRP1-202ENST00000471909 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
RRP1-202ENST00000471909 VPS37DQ86XT2 251 aa20.26■□□□□ 0.83
RRP1-202ENST00000471909 TMEM87BQ96K49 555 aa20.26■□□□□ 0.83
RRP1-202ENST00000471909 FTOQ9C0B1 505 aaKnown RBP eCLIP20.26■□□□□ 0.83
RRP1-202ENST00000471909 ORC3Q9UBD5 711 aaPredicted RBP20.26■□□□□ 0.83
RRP1-202ENST00000471909 KLRK1P26718 216 aa20.26■□□□□ 0.83
RRP1-202ENST00000471909 TDO2P48775 406 aa20.26■□□□□ 0.83
RRP1-202ENST00000471909 OTUD7BQ6GQQ9 843 aa20.26■□□□□ 0.83
RRP1-202ENST00000471909 NACAP1Q9BZK3 213 aa20.26■□□□□ 0.83
RRP1-202ENST00000471909 DACT1Q9NYF0 836 aa20.26■□□□□ 0.83
RRP1-202ENST00000471909 RAI14Q9P0K7 980 aa20.26■□□□□ 0.83
RRP1-202ENST00000471909 ZSWIM5Q9P217 1185 aa20.26■□□□□ 0.83
RRP1-202ENST00000471909 AKNAD1Q5T1N1 836 aa20.25■□□□□ 0.83
RRP1-202ENST00000471909 APOA5Q6Q788 366 aa20.25■□□□□ 0.83
RRP1-202ENST00000471909 PRDM10Q9NQV6 1147 aa20.25■□□□□ 0.83
RRP1-202ENST00000471909 TM4SF1P30408 202 aa20.25■□□□□ 0.83
RRP1-202ENST00000471909 FBXO33Q7Z6M2 555 aa20.25■□□□□ 0.83
RRP1-202ENST00000471909 LY9Q9HBG7 655 aa20.25■□□□□ 0.83
RRP1-202ENST00000471909 TPM3P06753 285 aa20.24■□□□□ 0.83
RRP1-202ENST00000471909 RFC4P35249 363 aa20.24■□□□□ 0.83
RRP1-202ENST00000471909 SEPT12Q8IYM1 358 aa20.24■□□□□ 0.83
RRP1-202ENST00000471909 USP28Q96RU2 1077 aa20.24■□□□□ 0.83
RRP1-202ENST00000471909 NUP62CLQ9H1M0 184 aa20.24■□□□□ 0.83
RRP1-202ENST00000471909 RCOR1Q9UKL0 485 aa20.24■□□□□ 0.83
RRP1-202ENST00000471909 RXRAP19793 462 aa20.24■□□□□ 0.83
RRP1-202ENST00000471909 METAP2P50579 478 aaKnown RBP eCLIP20.24■□□□□ 0.83
RRP1-202ENST00000471909 CAMK4Q16566 473 aa20.24■□□□□ 0.83
RRP1-202ENST00000471909 TRAPPC3LQ5T215 181 aa20.24■□□□□ 0.83
RRP1-202ENST00000471909 C8orf76Q96K31 380 aa20.24■□□□□ 0.83
RRP1-202ENST00000471909 TMEM67Q5HYA8 995 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 FAM196AQ6ZSG2 479 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 MFSD6Q6ZSS7 791 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 FBXO18Q8NFZ0 1043 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 STAG1Q8WVM7 1258 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 CNNM2Q9H8M5 875 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 LY75O60449 1722 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 HSPA1LP34931 641 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 ATL3Q6DD88 541 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 SGMS1Q86VZ5 419 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 KIAA1524Q8TCG1 905 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 BICD2Q8TD16 824 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 LRRC4BQ9NT99 713 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 GJB4Q9NTQ9 266 aa20.23■□□□□ 0.83
RRP1-202ENST00000471909 MAGEB6P1A0A0J9YX57 407 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 NR1I2O75469 434 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 CDC27P30260 824 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 CHAF1AQ13111 956 aaPredicted RBP20.22■□□□□ 0.83
RRP1-202ENST00000471909 ZNF384Q8TF68 577 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 SDR42E1Q8WUS8 393 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 KRT23Q9C075 422 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 TAF1LQ8IZX4 1826 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 LIFRP42702 1097 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 MICU3Q86XE3 530 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 ZNF396Q96N95 335 aaPredicted RBP20.22■□□□□ 0.83
RRP1-202ENST00000471909 RIOK1Q9BRS2 568 aaKnown RBP20.22■□□□□ 0.83
RRP1-202ENST00000471909 ANKRD2Q9GZV1 360 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 TIAM2Q8IVF5 1701 aa20.22■□□□□ 0.83
RRP1-202ENST00000471909 C4BP0C0L5 1744 aa20.21■□□□□ 0.83
RRP1-202ENST00000471909 GOLGA6L6A8MZA4 724 aa20.21■□□□□ 0.83
RRP1-202ENST00000471909 IFIT3O14879 490 aaKnown RBP20.21■□□□□ 0.83
RRP1-202ENST00000471909 MAP3K11Q16584 847 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms