RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 CRTC2Q53ET0 693 aaPredicted RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 ZNF790Q6PG37 636 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 CLASRPQ8N2M8 674 aaKnown RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 EVI5LQ96CN4 794 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 CARD10Q9BWT7 1032 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 PIM2Q9P1W9 311 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 COL6A3P12111 3177 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 PCDH11XQ9BZA7 1347 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 PCDH11YQ9BZA8 1340 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 SZT2Q5T011 3432 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 A0A0G2JLW4 131 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 ERVV-2B6SEH9 535 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 ATP5J2-PTCD1G3V325 749 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 LZTS3O60299 673 aaPredicted RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 SURF6O75683 361 aaKnown RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 BAG4O95429 457 aaKnown RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 SNRPA1P09661 255 aaKnown RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 ZNF445P59923 1031 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 MCCD1P59942 119 aaPredicted RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 NEXNQ0ZGT2 675 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 PTK7Q13308 1070 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 DALRD3Q5D0E6 543 aaKnown RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 DNAJC14Q6Y2X3 702 aaPredicted RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 FAM200AQ8TCP9 573 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 USB1Q9BQ65 265 aaKnown RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 METTL22Q9BUU2 404 aaPredicted RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 PRR14Q9BWN1 585 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 ECHDC1Q9NTX5 307 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 CCNL1Q9UK58 526 aaPredicted RBP6.92□□□□□ -1.3
TRA2B-209ENST00000466832 MAP3K2Q9Y2U5 619 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 TOGARAM1Q9Y4F4 1720 aa6.92□□□□□ -1.3
TRA2B-209ENST00000466832 MBD3O95983 291 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 PUS10Q3MIT2 529 aaKnown RBP6.91□□□□□ -1.3
TRA2B-209ENST00000466832 RABL6Q3YEC7 729 aaPredicted RBP6.91□□□□□ -1.3
TRA2B-209ENST00000466832 MPRIPQ6WCQ1 1025 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 DEPDC4Q8N2C3 294 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 FMNL2Q96PY5 1086 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 NBPF3Q9H094 633 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 GPSM3Q9Y4H4 160 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 ZNF831Q5JPB2 1677 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 IQCA1LA6NCM1 817 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 PTPRNQ16849 979 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 ANKRD13DQ6ZTN6 518 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 LRP10Q7Z4F1 713 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 TMEM87AQ8NBN3 555 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 ZSCAN31Q96LW9 406 aaPredicted RBP6.91□□□□□ -1.3
TRA2B-209ENST00000466832 COPRSQ9NQ92 184 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 C9orf78Q9NZ63 289 aaPredicted RBP6.91□□□□□ -1.3
TRA2B-209ENST00000466832 VPS9D1Q9Y2B5 631 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 AXIN2Q9Y2T1 843 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 SYNGAP1Q96PV0 1343 aa6.91□□□□□ -1.3
TRA2B-209ENST00000466832 ABCC12Q96J65 1359 aa6.9□□□□□ -1.3
TRA2B-209ENST00000466832 SOWAHDA6NJG2 315 aa6.9□□□□□ -1.3
TRA2B-209ENST00000466832 NBPF7P0C2Y1 421 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-209ENST00000466832 DPEP1P16444 411 aa6.9□□□□□ -1.3
TRA2B-209ENST00000466832 EIF2S2P20042 333 aaKnown RBP6.9□□□□□ -1.3
TRA2B-209ENST00000466832 RASA1P20936 1047 aa6.9□□□□□ -1.3
TRA2B-209ENST00000466832 SLFNL1Q499Z3 407 aa6.9□□□□□ -1.3
TRA2B-209ENST00000466832 RNF19BQ6ZMZ0 732 aa6.9□□□□□ -1.3
TRA2B-209ENST00000466832 CTU1Q7Z7A3 348 aaKnown RBP6.9□□□□□ -1.3
TRA2B-209ENST00000466832 LSG1Q9H089 658 aaKnown RBP6.9□□□□□ -1.3
TRA2B-209ENST00000466832 GPR108Q9NPR9 543 aa6.9□□□□□ -1.3
TRA2B-209ENST00000466832 SCN4AP35499 1836 aa6.9□□□□□ -1.3
TRA2B-209ENST00000466832 NEURL1BA8MQ27 555 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 KCNQ3O43525 872 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 NCOA4Q13772 614 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 TSGA10IPQ3SY00 556 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 DMRTA1Q5VZB9 504 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 KIAA1211Q6ZU35 1233 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 SH2B1Q9NRF2 756 aaPredicted RBP6.9□□□□□ -1.31
TRA2B-209ENST00000466832 IGSF5Q9NSI5 407 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 ATG3Q9NT62 314 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 HMG20BQ9P0W2 317 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 CEP126Q9P2H0 1117 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 HPS5Q9UPZ3 1129 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 ARAP2Q8WZ64 1704 aa6.9□□□□□ -1.31
TRA2B-209ENST00000466832 ITGB4P16144 1822 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 MED23Q9ULK4 1368 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 POTEB2H3BUK9 544 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 JUNDP17535 347 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 PBX2P40425 430 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 GCKRQ14397 625 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 BRICD5Q6PL45 260 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 BLOC1S3Q6QNY0 202 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 ANKMY2Q8IV38 441 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 TTC5Q8N0Z6 440 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 PLBD2Q8NHP8 589 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 GPKOWQ92917 476 aaPredicted RBP eCLIP6.89□□□□□ -1.311e-18■■□□□ 12.2
TRA2B-209ENST00000466832 TMX3Q96JJ7 454 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 TTC14Q96N46 770 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 GRPEL1Q9HAV7 217 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 MAP10Q9P2G4 905 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 LAMB2P55268 1798 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 DDX60Q8IY21 1712 aaKnown RBP6.89□□□□□ -1.31
TRA2B-209ENST00000466832 RPAP1Q9BWH6 1393 aaPredicted RBP6.89□□□□□ -1.31
TRA2B-209ENST00000466832 MYH3P11055 1940 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 IFIT2P09913 472 aaKnown RBP6.89□□□□□ -1.31
TRA2B-209ENST00000466832 ATP2B4P23634 1241 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 G3BP1Q13283 466 aaKnown RBP eCLIP6.89□□□□□ -1.312e-7■□□□□ 10.7
TRA2B-209ENST00000466832 SWI5Q1ZZU3 235 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms