RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 ZCRB1Q8TBF4 217 aaKnown RBP5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 BSNDQ8WZ55 320 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 ZKSCAN3Q9BRR0 538 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 RUSC1Q9BVN2 902 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 PIF1Q9H611 641 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 SCAMP3O14828 347 aaKnown RBP5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 EREGO14944 169 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 FZD6O60353 706 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 ATP2B1P20020 1258 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 SPINK2P20155 84 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 ARL4DP49703 201 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 NLRP12P59046 1061 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 RBL2Q08999 1139 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 ZFYVE27Q5T4F4 411 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 C9orf131Q5VYM1 1079 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 MCTP1Q6DN14 999 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 INTS5Q6P9B9 1019 aaKnown RBP5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 VN1R5Q7Z5H4 357 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 CLEC10AQ8IUN9 316 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 TRIM42Q8IWZ5 723 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 FAM9BQ8IZU0 186 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 NXPE3Q969Y0 559 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 OSMRQ99650 979 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 FAM83CQ9BQN1 747 aa5.24□□□□□ -1.57
HMGB3P30-201ENST00000457863 HMX2A2RU54 273 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 SART1O43290 800 aaKnown RBP5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 SH3BP5O60239 455 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 TRPA1O75762 1119 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 GRIK1P39086 918 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 FOXD4Q12950 439 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 PEAR1Q5VY43 1037 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 FDX2Q6P4F2 183 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 CLEC4GQ6UXB4 293 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 CCAR1Q8IX12 1150 aaKnown RBP5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 SLC7A3Q8WY07 619 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 TINF2Q9BSI4 451 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 TMPRSS13Q9BYE2 586 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 SUGCTQ9HAC7 445 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 NLRP2Q9NX02 1062 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 BIN2Q9UBW5 565 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 FOXD3Q9UJU5 478 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 PNMA2Q9UL42 364 aa5.23□□□□□ -1.57
HMGB3P30-201ENST00000457863 LOC100289279A0A1B0GTE1 492 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 PRR19A6NJB7 356 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 EIF4EBP3O60516 100 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 MED26O95402 600 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 TIAF1O95411 115 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 BMP3P12645 472 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 PAX3P23760 479 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 GTF2F1P35269 517 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 SERPINB4P48594 390 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 FKBP4Q02790 459 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 IKBKEQ14164 716 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 MRPL58Q14197 206 aaKnown RBP5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 LDLRAD1Q5T700 205 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 KRBA2Q6ZNG9 492 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 TSHZ1Q6ZSZ6 1077 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 BEND4Q6ZU67 534 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 DTX1Q86Y01 620 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 GABBR1Q9UBS5 961 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 EGFL7Q9UHF1 273 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 RPS6KL1Q9Y6S9 549 aa5.22□□□□□ -1.57
HMGB3P30-201ENST00000457863 COL17A1Q9UMD9 1497 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 SOX1O00570 391 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 GAS2O43903 313 aaKnown RBP5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 ESRRAP11474 423 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 HSD3B2P26439 372 aa5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 COL19A1Q14993 1142 aa5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 CPSF6Q16630 551 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 PLEKHG6Q3KR16 790 aa5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 RNF187Q5TA31 235 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 HGSNATQ68CP4 663 aa5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 ZNF746Q6NUN9 644 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 SMG8Q8ND04 991 aaKnown RBP5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 MTA3Q9BTC8 594 aa5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 NRSN2Q9GZP1 204 aa5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 IRF2BPLQ9H1B7 796 aa5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 ZSWIM4Q9H7M6 989 aa5.21□□□□□ -1.58
HMGB3P30-201ENST00000457863 FAM43BQ6ZT52 329 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P30-201ENST00000457863 METTL16Q86W50 562 aaKnown RBP5.2□□□□□ -1.58
HMGB3P30-201ENST00000457863 SHKBP1Q8TBC3 707 aa5.2□□□□□ -1.58
HMGB3P30-201ENST00000457863 GMLQ99445 158 aa5.2□□□□□ -1.58
HMGB3P30-201ENST00000457863 CYP4F12Q9HCS2 524 aa5.2□□□□□ -1.58
HMGB3P30-201ENST00000457863 PCDH12Q9NPG4 1184 aa5.2□□□□□ -1.58
HMGB3P30-201ENST00000457863 LATS2Q9NRM7 1088 aa5.2□□□□□ -1.58
HMGB3P30-201ENST00000457863 COL4A3BPQ9Y5P4 624 aa5.2□□□□□ -1.58
HMGB3P30-201ENST00000457863 MAP4P27816 1152 aaKnown RBP5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 GP2P55259 537 aaKnown RBP5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 RHBDL3P58872 404 aa5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 ZNF211Q13398 564 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 C4orf46Q504U0 113 aa5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 SOGA3Q5TF21 947 aa5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 NUTM2GQ5VZR2 741 aa5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 NT5DC4Q86YG4 428 aa5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 KRTAP1-3Q8IUG1 177 aa5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 CCDC146Q8IYE0 955 aa5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 PNISRQ8TF01 805 aaKnown RBP5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 USP26Q9BXU7 913 aa5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 KCNF1Q9H3M0 494 aa5.19□□□□□ -1.58
HMGB3P30-201ENST00000457863 ZFYVE28Q9HCC9 887 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms